Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 7.2e-49 196.8 93 100.0
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.4e-44 181.8 93 92.5
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.8e-43 176.8 93 87.1
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 7.8e-43 176.8 93 87.1
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.9e-42 174.9 93 86.0
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.9e-42 174.9 93 86.0
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 5.0e-42 174.1 93 88.2
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.1e-41 172.9 93 84.9
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 3.3e-41 171.4 93 87.1
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 8.0e-40 166.8 93 84.9
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.7e-34 149.1 99 73.7
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 3.9e-34 147.9 100 73.0
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 3.9e-34 147.9 93 78.5
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 5.0e-34 147.5 97 74.2
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.5e-33 146.0 93 72.0
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.9e-33 145.6 94 75.5
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.9e-33 145.6 100 71.0
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 4.3e-33 144.4 98 69.4
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 4.3e-33 144.4 98 69.4
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 4.3e-33 144.4 93 69.9
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 4.3e-33 144.4 98 69.4
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 4.3e-33 144.4 93 68.8
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 5.6e-33 144.1 93 69.9
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 5.6e-33 144.1 93 68.8
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 5.6e-33 144.1 93 69.9
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 5.6e-33 144.1 93 68.8
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.2e-32 142.9 93 67.7
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 1.6e-32 142.5 96 69.8
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 2.1e-32 142.1 97 72.2
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 2.1e-32 142.1 99 69.7
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 2.8e-32 141.7 101 68.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 3.6e-32 141.4 94 69.1
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 3.6e-32 141.4 94 69.1
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 3.6e-32 141.4 99 69.7
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 4.7e-32 141.0 98 68.4
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.2e-32 140.6 95 74.7
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 8.1e-32 140.2 99 72.7
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 1.1e-31 139.8 98 68.4
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.8e-31 139.0 94 73.4
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 3.1e-31 138.3 101 65.3
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 5.2e-31 137.5 98 67.3
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 5.2e-31 137.5 99 69.7
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 6.8e-31 137.1 100 71.0
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 8.9e-31 136.7 103 68.0
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 8.9e-31 136.7 103 68.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.2e-30 136.3 99 71.7
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-30 136.3 103 67.0
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.5e-30 136.0 94 72.3
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.5e-30 136.0 92 73.9
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 2.0e-30 135.6 103 66.0
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 2.6e-30 135.2 99 70.7
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.6e-30 135.2 103 67.0
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-30 134.8 103 66.0
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 5.8e-30 134.0 103 65.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.3e-29 132.9 103 65.0
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.7e-29 132.5 105 61.0
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 2.2e-29 132.1 101 65.3
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 2.2e-29 132.1 103 64.1
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 2.2e-29 132.1 103 64.1
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.9e-29 131.7 103 65.0
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 3.7e-29 131.3 106 63.2
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 3.7e-29 131.3 94 66.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 4.9e-29 131.0 106 63.2
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 8.3e-29 130.2 97 62.9
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.1e-28 129.8 107 63.6
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.1e-28 129.8 103 65.0
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.9e-28 129.0 107 63.6
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.9e-28 129.0 107 63.6
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.9e-28 129.0 107 63.6
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.9e-28 129.0 103 66.0
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.4e-28 128.6 95 66.3
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 2.4e-28 128.6 103 62.1
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.4e-28 128.6 100 63.0
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 3.2e-28 128.3 93 68.8
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 5.4e-28 127.5 97 68.0
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.2e-27 126.3 102 68.6
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 2.1e-27 125.6 99 64.6
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 2.1e-27 125.6 111 56.8
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 2.7e-27 125.2 88 71.6
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 3.5e-27 124.8 88 64.8
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 3.5e-27 124.8 104 60.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 6.0e-27 124.0 87 69.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 1.0e-26 123.2 106 62.3
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.0e-26 123.2 104 64.4
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.3e-26 122.9 100 59.0
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 1.3e-26 122.9 100 66.0
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 2.3e-26 122.1 100 61.0
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.3e-26 122.1 105 61.9
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 2.3e-26 122.1 103 60.2
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 3.9e-26 121.3 97 63.9
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 6.6e-26 120.6 96 59.4
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 8.6e-26 120.2 100 58.0
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 8.6e-26 120.2 105 60.0
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 8.6e-26 120.2 105 60.0
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 8.6e-26 120.2 105 62.9
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.1e-25 119.8 102 62.7
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.5e-25 119.4 98 62.2
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.5e-25 118.6 100 61.0
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 4.3e-25 117.9 98 61.2
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 4.3e-25 117.9 103 60.2
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 5.6e-25 117.5 95 61.1
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.2e-24 116.3 100 62.0
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 4.7e-24 114.4 73 76.7
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 6.2e-24 114.0 95 62.1
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 6.2e-24 114.0 67 80.6
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 6.2e-24 114.0 123 54.5
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 8.1e-24 113.6 102 61.8
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.4e-23 112.8 102 57.8
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 2.3e-23 112.1 106 60.4
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 4.0e-23 111.3 66 81.8
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 5.2e-23 110.9 103 56.3
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-21 106.3 93 58.1
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.9e-21 104.4 102 57.8
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 6.4e-21 104.0 108 55.6
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 6.4e-21 104.0 62 75.8
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 8.6e-18 93.6 100 52.0
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.2e-16 89.7 71 54.9
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.6e-16 89.4 75 54.7
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.1e-16 89.0 70 58.6
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 3.1e-15 85.1 90 51.1
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 5.2e-15 84.3 94 46.8
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 2.0e-14 82.4 52 69.2
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 7.6e-14 80.5 55 70.9
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.7e-13 79.3 57 59.6
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 4.6e-11 71.2 32 90.6
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 4.6e-11 71.2 50 66.0
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.3e-10 69.7 67 56.7
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.7e-10 69.3 67 55.2
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 3.4e-06 55.1 65 52.3


User provided reference genes

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