Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.0e-61 240.4 170 100.0
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 8.9e-53 210.7 173 82.7
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-52 209.9 124 88.7
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 5.7e-52 208.0 123 88.6
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 5.7e-52 208.0 123 88.6
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.2e-51 206.1 124 87.1
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 1.2e-44 183.7 134 75.4
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 3.4e-44 182.2 123 78.9
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 4.4e-44 181.8 125 78.4
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 9.8e-44 180.6 123 76.4
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.7e-43 178.7 128 76.6
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 4.9e-43 178.3 121 77.7
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.1e-42 177.2 123 77.2
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 2.4e-42 176.0 123 77.2
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 4.1e-42 175.3 121 77.7
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 7.0e-42 174.5 123 75.6
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 7.0e-42 174.5 128 73.4
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 9.2e-42 174.1 129 76.0
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.6e-41 173.3 129 74.4
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 1.3e-40 170.2 129 73.6
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.7e-40 169.9 124 76.6
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 3.0e-40 169.1 129 72.9
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 3.9e-40 168.7 120 74.2
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 5.0e-40 168.3 124 75.8
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 6.6e-40 167.9 125 72.8
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 8.6e-40 167.5 118 75.4
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 8.6e-40 167.5 131 69.5
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.1e-39 167.2 173 75.7
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.5e-39 166.8 119 75.6
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 1.9e-39 166.4 134 69.4
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 4.3e-39 165.2 129 74.4
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 4.3e-39 165.2 124 71.8
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 4.3e-39 165.2 134 70.9
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 9.5e-39 164.1 130 70.0
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 9.5e-39 164.1 130 70.0
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.1e-38 162.9 121 73.6
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 2.8e-38 162.5 126 71.4
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 4.7e-38 161.8 130 69.2
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.2e-38 161.4 130 66.9
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 6.2e-38 161.4 124 71.0
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.4e-37 160.2 103 82.5
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.4e-37 160.2 114 77.2
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.8e-37 159.8 114 77.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 3.1e-37 159.1 127 70.9
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 3.1e-37 159.1 103 83.5
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 6.8e-37 157.9 126 69.8
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.2e-36 157.1 122 72.1
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.5e-36 156.8 111 74.8
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.6e-36 156.0 124 66.1
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.4e-36 155.6 123 72.4
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.4e-36 155.6 112 77.7
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 3.4e-36 155.6 124 67.7
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.4e-36 155.6 124 67.7
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.4e-36 155.6 124 67.7
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 3.4e-36 155.6 127 68.5
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 3.4e-36 155.6 113 74.3
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 3.4e-36 155.6 113 74.3
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 3.4e-36 155.6 119 74.8
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.4e-36 155.2 128 68.8
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 5.8e-36 154.8 119 70.6
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 9.8e-36 154.1 124 66.9
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 9.8e-36 154.1 106 77.4
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.3e-35 153.7 104 79.8
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 1.3e-35 153.7 102 82.4
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.3e-35 153.7 122 70.5
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.7e-35 153.3 130 66.2
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 2.2e-35 152.9 131 66.4
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 3.7e-35 152.1 131 66.4
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 6.4e-35 151.4 127 63.8
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 8.3e-35 151.0 94 85.1
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 8.3e-35 151.0 130 70.0
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.4e-34 150.2 131 67.9
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.4e-34 150.2 127 63.8
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.4e-34 150.2 124 68.5
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.4e-34 150.2 127 63.0
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.4e-34 150.2 104 76.9
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.9e-34 149.8 180 51.7
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.4e-34 149.4 167 55.1
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 3.2e-34 149.1 128 64.1
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.1e-34 148.7 134 60.4
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 4.1e-34 148.7 128 63.3
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 4.1e-34 148.7 128 63.3
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 4.1e-34 148.7 128 63.3
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 4.1e-34 148.7 101 78.2
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 9.2e-34 147.5 128 63.3
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 9.2e-34 147.5 151 58.3
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.2e-33 147.1 125 66.4
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.1e-33 146.4 124 64.5
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.7e-33 146.0 157 81.5
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 4.6e-33 145.2 122 63.9
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 4.6e-33 145.2 102 78.4
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.7e-32 143.3 129 61.2
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.3e-32 142.9 123 62.6
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 3.0e-32 142.5 109 72.5
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 3.0e-32 142.5 82 89.0
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 3.9e-32 142.1 128 60.9
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 3.9e-32 142.1 128 60.9
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 5.1e-32 141.7 125 63.2
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 6.6e-32 141.4 79 91.1
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 8.6e-32 141.0 124 64.5
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.1e-31 140.6 124 67.7
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.5e-31 140.2 89 84.3
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 4.3e-31 138.7 78 91.0
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 2.8e-30 136.0 112 65.2
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 8.1e-30 134.4 181 50.3
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 8.1e-30 134.4 77 88.3
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 2.3e-29 132.9 95 75.8
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.0e-28 129.8 100 70.0
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.6e-28 129.4 97 75.3
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.3e-27 127.1 101 70.3
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 8.4e-27 124.4 206 51.5
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 7.1e-26 121.3 114 60.5
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 1.7e-24 116.7 82 78.0
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.0e-24 115.9 91 74.7
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 3.9e-24 115.5 116 62.9
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.5e-23 113.6 136 50.0
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 3.3e-23 112.5 98 65.3
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.4e-21 106.3 104 57.7
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 3.1e-21 105.9 83 71.1
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 2.0e-20 103.2 76 73.7
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.9e-19 99.4 246 33.7
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.1e-17 93.2 88 62.5
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 2.1e-17 93.2 89 61.8
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 8.1e-14 81.3 101 52.5
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 5.8e-12 75.1 43 88.4
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.3e-11 73.9 53 69.8
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.3e-11 73.9 59 67.8
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 2.2e-11 73.2 108 47.2
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.9e-10 70.1 57 64.9
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 1.1e-07 60.8 70 47.1
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 1.5e-07 60.5 40 72.5


User provided reference genes

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