Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 9.9e-33 142.9 74 100.0
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 1.3e-27 125.9 73 87.7
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 8.1e-27 123.2 73 86.3
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.1e-26 122.9 73 86.3
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 4.4e-25 117.5 74 85.1
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.5e-22 107.8 75 77.3
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 6.0e-22 107.1 79 69.6
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 7.8e-22 106.7 73 76.7
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 1.3e-21 105.9 73 76.7
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.3e-21 105.9 75 76.0
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.7e-21 105.5 75 76.0
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 3.0e-21 104.8 73 75.3
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 5.1e-21 104.0 73 75.3
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 5.1e-21 104.0 75 76.0
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.5e-20 102.4 75 70.7
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.5e-20 102.4 75 70.7
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 2.5e-20 101.7 75 72.0
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 2.5e-20 101.7 78 66.7
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 3.3e-20 101.3 81 70.4
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 5.6e-20 100.5 79 68.4
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 5.6e-20 100.5 76 68.4
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.6e-20 99.8 75 73.3
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 2.1e-19 98.6 75 70.7
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 2.1e-19 98.6 74 70.3
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 2.8e-19 98.2 73 72.6
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.8e-19 97.4 75 72.0
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 6.2e-19 97.1 73 68.5
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 6.2e-19 97.1 73 68.5
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 1.4e-18 95.9 84 63.1
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.8e-18 95.5 83 67.5
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 2.4e-18 95.1 75 66.7
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 2.4e-18 95.1 75 66.7
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 3.1e-18 94.7 76 67.1
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 5.3e-18 94.0 85 63.5
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 5.3e-18 94.0 75 69.3
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 9.0e-18 93.2 73 71.2
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 9.0e-18 93.2 70 70.0
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.2e-17 92.8 75 68.0
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 2.0e-17 92.0 73 64.4
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.0e-17 92.0 70 68.6
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.6e-17 91.7 65 78.5
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 4.5e-17 90.9 73 64.4
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 7.6e-17 90.1 97 56.7
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.3e-16 89.4 75 61.3
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.7e-16 89.0 79 62.0
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 2.9e-16 88.2 74 63.5
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 3.8e-16 87.8 80 62.5
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 3.8e-16 87.8 74 66.2
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 3.8e-16 87.8 73 63.0
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 4.9e-16 87.4 71 66.2
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 6.4e-16 87.0 75 62.7
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 1.1e-15 86.3 86 60.5
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.4e-15 85.9 76 60.5
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 1.4e-15 85.9 73 61.6
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 1.4e-15 85.9 71 63.4
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 2.4e-15 85.1 74 62.2
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 2.4e-15 85.1 74 59.5
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 3.2e-15 84.7 80 57.5
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 4.2e-15 84.3 86 59.3
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 4.2e-15 84.3 77 59.7
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 4.2e-15 84.3 82 61.0
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.2e-15 84.3 73 65.8
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 4.2e-15 84.3 73 64.4
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 5.4e-15 84.0 78 59.0
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 7.1e-15 83.6 71 67.6
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 1.2e-14 82.8 79 58.2
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 1.2e-14 82.8 79 58.2
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.2e-14 82.8 78 57.7
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.2e-14 82.8 78 57.7
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.1e-14 82.0 74 59.5
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 2.1e-14 82.0 86 58.1
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 2.1e-14 82.0 76 60.5
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 2.7e-14 81.6 83 54.2
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 3.5e-14 81.3 86 57.0
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 4.6e-14 80.9 78 56.4
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.0e-13 79.7 69 62.3
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.0e-13 79.7 78 60.3
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.0e-13 79.7 77 61.0
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.0e-13 79.7 78 60.3
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.8e-13 79.0 67 65.7
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 1.8e-13 79.0 81 56.8
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.8e-13 79.0 75 60.0
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.8e-13 79.0 73 61.6
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.3e-13 78.6 74 62.2
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 3.0e-13 78.2 57 73.7
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 3.0e-13 78.2 75 58.7
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 5.1e-13 77.4 77 51.9
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 5.1e-13 77.4 68 64.7
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 5.1e-13 77.4 71 62.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 6.7e-13 77.0 72 59.7
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 6.7e-13 77.0 70 61.4
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 6.7e-13 77.0 81 51.9
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 8.7e-13 76.6 39 92.3
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 8.7e-13 76.6 39 92.3
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.1e-12 76.3 74 60.8
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.5e-12 75.9 46 80.4
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.5e-12 75.9 69 62.3
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 1.5e-12 75.9 73 61.6
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 2.5e-12 75.1 71 57.7
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 3.3e-12 74.7 73 54.8
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 7.4e-12 73.6 75 54.7
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 7.4e-12 73.6 73 57.5
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 7.4e-12 73.6 77 50.6
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 1.6e-11 72.4 73 57.5
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 1.6e-11 72.4 38 86.8
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.1e-10 69.7 75 54.7
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 1.8e-10 68.9 62 53.2
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 9.0e-10 66.6 42 83.3
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 9.0e-10 66.6 42 83.3
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 7.6e-09 63.5 38 73.7
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 6.0e-06 53.9 45 66.7


User provided reference genes

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