Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 1.3e-255 885.9 457 100.0
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 6.0e-213 744.2 489 80.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.3e-212 743.0 489 78.9
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 3.3e-211 738.4 489 78.5
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.1e-209 733.4 488 79.3
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 9.9e-208 726.9 489 77.9
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.4e-185 653.3 486 73.0
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 4.8e-170 601.7 495 65.5
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 1.3e-167 593.6 492 64.2
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 2.9e-167 592.4 495 64.0
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 2.7e-165 585.9 494 63.2
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 6.1e-165 584.7 495 62.8
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 5.1e-164 581.6 499 63.7
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 2.2e-162 576.2 494 63.8
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 4.1e-161 572.0 488 62.1
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.2e-159 566.2 512 61.1
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.2e-159 566.2 500 61.6
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 5.0e-159 565.1 466 65.5
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 6.5e-159 564.7 490 62.2
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.2e-158 562.4 485 63.1
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.2e-157 560.5 468 64.1
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 1.6e-157 560.1 433 67.7
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 1.1e-155 553.9 493 59.6
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 4.8e-154 548.5 488 60.2
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 1.1e-153 547.4 487 60.2
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 3.1e-153 545.8 465 63.0
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.0e-151 540.8 486 59.1
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 2.2e-151 539.7 489 60.9
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 2.9e-151 539.3 485 60.2
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 6.5e-151 538.1 498 59.2
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.5e-150 537.0 485 60.0
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 7.2e-150 534.6 486 59.3
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.1e-149 533.1 442 64.5
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 4.4e-147 525.4 485 58.6
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 7.5e-147 524.6 488 59.6
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 8.2e-146 521.2 485 57.3
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.4e-145 520.4 488 57.4
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 4.1e-145 518.8 498 56.4
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 1.2e-144 517.3 487 58.7
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.6e-144 516.9 486 57.2
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 5.9e-144 515.0 484 57.0
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 1.0e-143 514.2 472 58.3
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 2.2e-143 513.1 492 56.1
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 6.5e-143 511.5 479 58.2
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 3.2e-142 509.2 488 57.2
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 7.2e-142 508.1 566 52.1
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.2e-139 500.7 484 55.2
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 4.4e-139 498.8 494 54.9
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 2.8e-138 496.1 485 58.6
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 2.8e-138 496.1 490 54.9
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 4.8e-138 495.4 491 55.2
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 8.3e-138 494.6 488 54.9
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 3.1e-137 492.7 493 55.2
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 5.4e-137 491.9 485 53.6
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 9.1e-137 491.1 459 57.7
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 2.7e-136 489.6 486 54.1
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 8.6e-135 484.6 491 54.4
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 9.5e-134 481.1 405 62.2
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.2e-133 480.7 485 52.6
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 2.8e-133 479.6 492 54.1
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 4.7e-133 478.8 494 54.5
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 1.0e-132 477.6 456 55.7
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 1.4e-132 477.2 496 53.8
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 5.2e-132 475.3 494 53.6
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 5.2e-132 475.3 491 53.0
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.5e-131 473.8 490 54.1
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 2.0e-131 473.4 491 52.7
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 3.4e-131 472.6 495 53.1
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 4.4e-131 472.2 485 54.0
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 5.7e-131 471.9 489 53.6
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.7e-130 470.3 485 54.2
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 2.2e-130 469.9 494 53.4
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 2.8e-130 469.5 494 53.4
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 6.3e-130 468.4 358 66.2
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 4.1e-129 465.7 436 57.1
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 7.0e-129 464.9 495 53.3
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.2e-128 464.2 479 54.1
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.7e-128 463.0 495 52.7
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.7e-128 463.0 495 52.7
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 1.5e-126 457.2 491 51.5
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 4.3e-126 455.7 501 52.5
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.6e-126 455.3 425 58.6
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 1.4e-124 450.7 491 52.7
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 8.3e-122 441.4 489 53.0
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 1.6e-120 437.2 499 49.3
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 3.5e-120 436.0 394 60.4
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 7.3e-118 428.3 485 50.3
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 4.7e-117 425.6 519 47.0
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.8e-116 423.7 542 45.8
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 8.9e-116 421.4 491 48.7
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.2e-115 421.0 491 50.3
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 5.0e-111 405.6 521 45.5
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 7.3e-110 401.7 360 60.3
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 3.1e-108 396.4 370 58.6
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 7.5e-107 391.7 485 43.5
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 8.3e-106 388.3 490 48.0
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.1e-105 387.9 485 43.1
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 5.6e-102 375.6 460 49.1
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.4e-100 370.9 362 54.7
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.4e-100 370.9 359 55.2
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 2.7e-88 330.1 480 41.7
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 7.8e-88 328.6 482 41.7
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 7.8e-88 328.6 396 47.5
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 1.4e-76 291.2 250 62.8
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 1.2e-72 278.1 352 47.2
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 9.0e-68 261.9 243 60.9
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.2e-65 253.4 285 46.3
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 2.2e-61 240.7 498 34.5
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 3.2e-57 226.9 427 34.2
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 2.3e-55 220.7 336 43.2
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 5.7e-54 216.1 280 46.4
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.5e-51 208.0 274 45.6
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.5e-51 206.5 186 61.3
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 1.1e-46 191.8 142 66.2
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.1e-44 183.7 132 77.3
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 2.7e-40 170.6 275 39.3
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 3.6e-40 170.2 344 32.6
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 4.7e-40 169.9 242 41.3
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 7.4e-38 162.5 100 82.0
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 7.4e-38 162.5 417 31.7
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.0e-31 140.6 100 71.0
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 3.0e-31 140.6 169 46.2
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 3.1e-28 130.6 392 27.0
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 4.5e-27 126.7 108 67.6
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.1e-25 122.1 74 79.7
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 5.2e-23 113.2 129 49.6
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 6.8e-23 112.8 195 37.9
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 2.4e-20 104.4 103 57.3
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.8e-15 86.3 110 50.0
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 2.0e-14 84.7 106 38.7
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 2.4e-12 77.8 108 47.2
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 1.1e-09 68.9 89 52.8
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 1.1e-09 68.9 89 52.8


User provided reference genes

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