Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.3e-51 206.1 104 100.0
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 8.1e-49 196.8 104 94.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.2e-47 193.0 104 89.4
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.8e-47 190.7 104 91.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.3e-46 189.5 102 91.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 4.9e-46 187.6 105 90.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 8.4e-46 186.8 104 88.5
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 8.4e-46 186.8 104 85.6
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.1e-45 183.7 104 90.4
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.7e-44 181.8 102 89.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 4.6e-44 181.0 102 85.3
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.0e-44 180.6 104 85.6
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.0e-43 179.9 102 88.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.7e-43 179.1 102 84.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.5e-42 176.0 106 86.8
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 2.8e-41 171.8 103 84.5
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 2.8e-41 171.8 103 84.5
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 8.1e-41 170.2 103 84.5
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.1e-40 168.3 97 81.4
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 4.0e-40 167.9 103 79.6
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 5.3e-40 167.5 103 79.6
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 9.0e-40 166.8 105 83.8
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 9.0e-40 166.8 102 83.3
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 4.5e-39 164.5 102 82.4
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 5.8e-39 164.1 97 86.6
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 7.6e-39 163.7 103 78.6
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 3.8e-38 161.4 102 80.4
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.4e-37 159.5 110 76.4
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.9e-37 159.1 103 83.5
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.9e-37 159.1 103 81.6
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.4e-37 158.7 103 79.6
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 5.4e-37 157.5 105 78.1
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 7.1e-37 157.1 97 82.5
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.2e-36 156.4 105 81.0
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.6e-36 156.0 97 79.4
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.6e-36 154.5 103 78.6
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 6.0e-36 154.1 104 78.8
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 6.0e-36 154.1 99 78.8
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 6.0e-36 154.1 99 78.8
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.0e-35 153.3 110 73.6
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.3e-35 152.9 105 80.0
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.8e-35 152.5 108 73.1
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 3.9e-35 151.4 103 78.6
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.1e-35 151.0 105 75.2
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.1e-34 149.8 98 81.6
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.5e-34 149.4 97 79.4
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.9e-34 149.1 114 74.6
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 2.5e-34 148.7 103 79.6
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 2.5e-34 148.7 103 79.6
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 4.3e-34 147.9 103 72.8
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 7.4e-34 147.1 86 86.0
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.3e-33 146.4 103 78.6
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 2.1e-33 145.6 104 76.0
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 2.1e-33 145.6 103 73.8
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 6.2e-33 144.1 104 76.0
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 8.1e-33 143.7 103 76.7
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 4.0e-32 141.4 103 76.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 4.0e-32 141.4 93 80.6
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 6.9e-32 140.6 108 71.3
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 6.9e-32 140.6 97 78.4
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.2e-31 139.8 104 73.1
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 2.0e-31 139.0 96 79.2
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 2.6e-31 138.7 113 69.0
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 2.6e-31 138.7 113 69.0
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.6e-31 138.7 98 78.6
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.6e-31 138.7 107 71.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.0e-30 136.7 108 73.1
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.3e-30 136.3 101 71.3
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 8.4e-30 133.7 104 70.2
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 8.4e-30 133.7 113 68.1
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.2e-29 131.7 108 69.4
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.2e-28 129.8 103 71.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.2e-28 129.8 103 71.8
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.6e-28 129.4 112 66.1
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.1e-28 129.0 104 63.5
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 2.1e-28 129.0 113 66.4
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 3.5e-28 128.3 112 60.7
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 4.6e-28 127.9 86 79.1
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 7.9e-28 127.1 104 62.5
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.3e-27 126.3 109 67.0
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 1.3e-27 126.3 110 66.4
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.3e-27 125.6 107 65.4
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 2.3e-27 125.6 110 67.3
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.3e-27 125.6 109 65.1
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 3.0e-27 125.2 113 64.6
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 3.9e-27 124.8 112 67.9
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 3.9e-27 124.8 112 67.9
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.9e-27 124.8 88 76.1
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 6.7e-27 124.0 110 63.6
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.5e-26 122.9 113 63.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.9e-26 122.5 111 59.5
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 2.5e-26 122.1 114 63.2
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 3.3e-26 121.7 104 66.3
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.3e-25 119.8 106 67.9
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.6e-25 119.4 90 74.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 2.8e-25 118.6 117 59.8
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.8e-25 118.6 107 63.6
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.1e-24 116.7 113 61.9
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.8e-24 115.9 110 59.1
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.4e-24 115.5 106 67.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.4e-24 115.5 106 67.0
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 4.1e-24 114.8 108 62.0
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 5.3e-24 114.4 103 60.2
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 9.0e-24 113.6 113 59.3
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 9.0e-24 113.6 106 62.3
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.2e-23 113.2 91 72.5
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 5.8e-23 110.9 112 63.4
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.3e-22 109.8 87 73.6
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 9.3e-21 103.6 65 84.6
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.1e-19 97.8 80 73.8
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 4.8e-17 91.3 58 82.8
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.1e-16 90.1 96 54.2
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 7.7e-15 84.0 86 62.8
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.7e-14 82.8 70 70.0
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.6e-12 76.3 105 48.6
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 7.9e-12 73.9 81 59.3
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 3.9e-11 71.6 114 43.9
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 7.4e-10 67.4 52 75.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 2.8e-09 65.5 100 42.0
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 9.1e-08 60.5 103 41.7
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 1.5e-07 59.7 55 63.6


User provided reference genes

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