Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 9.8e-46 186.4 93 100.0
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 8.9e-31 136.7 94 75.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 7.5e-30 133.7 94 73.4
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 1.7e-29 132.5 94 73.4
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 8.3e-29 130.2 94 75.5
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.1e-28 129.8 97 71.1
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.9e-28 129.0 97 71.1
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 1.4e-23 112.8 93 62.4
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.2e-22 109.8 92 63.0
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 4.4e-22 107.8 90 58.9
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 4.4e-22 107.8 96 60.4
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 9.9e-22 106.7 90 62.2
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 3.7e-21 104.8 93 62.4
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 8.4e-21 103.6 94 61.7
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.4e-20 102.8 77 70.1
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.4e-20 102.8 77 70.1
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 3.2e-20 101.7 89 60.7
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 4.1e-20 101.3 89 60.7
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 7.1e-20 100.5 85 62.4
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 2.7e-19 98.6 94 60.6
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 2.7e-19 98.6 84 60.7
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 3.5e-19 98.2 91 59.3
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.0e-18 96.7 91 59.3
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.0e-18 96.7 95 58.9
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 1.7e-18 95.9 101 55.4
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.7e-18 95.9 68 70.6
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 6.6e-18 94.0 68 70.6
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 6.6e-18 94.0 95 60.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 1.1e-17 93.2 106 50.0
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 1.5e-17 92.8 107 52.3
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 1.5e-17 92.8 89 58.4
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 3.3e-17 91.7 97 55.7
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 5.6e-17 90.9 91 58.2
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 7.3e-17 90.5 110 50.0
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 7.3e-17 90.5 109 53.2
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 9.6e-17 90.1 76 60.5
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 9.6e-17 90.1 108 50.0
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 1.2e-16 89.7 95 57.9
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 1.6e-16 89.4 111 49.5
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 1.6e-16 89.4 110 50.0
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.4e-15 86.3 75 60.0
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 1.4e-15 86.3 97 55.7
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.4e-15 85.5 79 62.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 2.4e-15 85.5 85 52.9
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 3.1e-15 85.1 68 63.2
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 4.0e-15 84.7 91 58.2
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 5.2e-15 84.3 74 56.8
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 8.9e-15 83.6 96 53.1
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 8.9e-15 83.6 107 48.6
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 8.9e-15 83.6 109 48.6
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 2.6e-14 82.0 91 54.9
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 5.8e-14 80.9 90 54.4
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 7.6e-14 80.5 109 47.7
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 9.9e-14 80.1 73 61.6
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 2.2e-13 79.0 80 55.0
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 2.2e-13 79.0 90 53.3
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 3.8e-13 78.2 79 55.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 1.1e-12 76.6 78 60.3
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 4.2e-12 74.7 98 51.0
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.6e-11 72.8 106 48.1
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 6.0e-11 70.9 78 52.6
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 1.0e-10 70.1 105 46.7
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.7e-10 69.3 74 55.4
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 5.1e-10 67.8 97 48.5
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 6.6e-10 67.4 69 56.5
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 8.7e-10 67.0 72 52.8
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.2e-08 60.8 69 53.6
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.2e-08 60.8 69 53.6
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 9.0e-07 57.0 73 46.6
QL02p013929 Quercus lobata HOM05D008020 ORTHO05D010140 2.0e-06 55.8 41 70.7


User provided reference genes

Program Settings