Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 6.5e-161 570.9 328 100.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 2.5e-144 515.8 327 75.2
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.1e-143 512.7 328 89.0
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 4.7e-143 511.5 328 90.5
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 4.7e-143 511.5 328 89.3
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 6.1e-143 511.1 328 86.6
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 2.3e-142 509.2 327 89.9
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 8.3e-140 500.7 328 87.2
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.4e-139 498.0 328 86.9
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 9.2e-139 497.3 327 87.5
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 9.2e-139 497.3 326 77.0
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.6e-138 496.5 328 89.6
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 2.7e-138 495.7 327 87.8
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 2.7e-138 495.7 327 87.8
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 3.5e-138 495.4 328 86.6
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 5.9e-138 494.6 327 87.2
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 7.7e-138 494.2 328 86.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.0e-137 493.8 328 86.3
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 3.8e-137 491.9 326 87.7
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 5.0e-137 491.5 326 86.8
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 6.6e-137 491.1 328 85.1
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.1e-136 490.3 328 86.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.9e-136 489.6 327 87.2
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.5e-136 489.2 325 72.6
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 7.3e-136 487.6 326 85.9
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.2e-135 486.9 329 71.4
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.2e-135 486.9 327 85.3
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.1e-135 486.1 326 85.9
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.1e-135 486.1 328 71.3
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 4.7e-135 485.0 327 87.5
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 4.7e-135 485.0 328 83.5
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 8.0e-135 484.2 326 85.9
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.4e-134 483.4 322 82.9
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.4e-134 483.4 325 69.8
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.4e-134 483.4 328 74.1
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.3e-134 482.6 328 70.7
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.0e-134 482.3 328 82.6
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 5.2e-134 481.5 328 70.4
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.2e-133 480.3 328 69.2
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.5e-133 479.9 326 70.6
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.6e-133 479.2 328 72.0
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.6e-133 479.2 325 70.5
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.3e-132 476.9 328 69.5
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.7e-132 476.5 328 85.1
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.2e-132 476.1 328 83.2
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 3.7e-132 475.3 325 70.8
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 4.9e-132 474.9 330 80.0
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.4e-131 473.4 328 70.4
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.4e-131 473.4 324 72.5
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.8e-131 473.0 328 83.8
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 9.2e-131 470.7 328 75.6
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.2e-130 470.3 328 84.1
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.6e-130 469.9 328 82.3
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 2.7e-130 469.2 328 81.7
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 3.5e-130 468.8 328 68.0
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 1.3e-129 466.8 326 82.5
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.7e-129 466.5 328 82.6
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 3.9e-129 465.3 328 81.7
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 5.0e-129 464.9 324 83.6
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.6e-129 464.5 236 90.7
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 2.5e-128 462.6 236 89.8
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 3.3e-128 462.2 328 81.4
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.0e-126 457.2 324 67.9
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 1.4e-126 456.8 326 66.0
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.3e-126 456.1 324 67.0
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.4e-125 451.8 328 66.5
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 4.4e-125 451.8 324 66.7
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.3e-124 450.3 236 86.9
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 2.9e-124 449.1 327 79.8
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 3.7e-124 448.7 323 67.2
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.0e-123 444.5 327 79.8
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.2e-122 443.7 327 79.5
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.2e-122 443.7 327 72.8
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.0e-122 443.0 327 79.5
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 3.5e-122 442.2 323 73.7
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.0e-121 440.7 236 85.6
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.9e-121 438.7 322 78.6
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.2e-119 433.7 323 69.7
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 2.1e-119 433.0 323 78.9
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.6e-119 432.2 329 77.2
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.1e-118 430.6 368 58.4
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-118 430.6 327 78.0
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 2.3e-118 429.5 323 63.2
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 5.2e-118 428.3 331 76.1
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.5e-117 426.8 323 62.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.5e-117 426.8 323 63.2
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.6e-117 426.0 323 62.5
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 4.9e-116 421.8 323 61.9
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 3.9e-113 412.1 324 60.8
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 5.1e-113 411.8 320 60.9
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 3.3e-112 409.1 320 75.6
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 1.2e-111 407.1 328 75.6
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 2.3e-110 402.9 320 60.0
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.2e-108 396.4 335 59.4
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.2e-106 390.6 231 75.3
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 4.6e-106 388.7 311 75.2
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.1e-102 375.9 281 86.5
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 2.1e-98 363.2 260 67.3
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.7e-98 362.8 325 52.9
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.6e-95 353.6 263 84.0
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 8.1e-95 351.3 324 68.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 8.1e-95 351.3 320 67.5
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.4e-94 350.5 266 80.5
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 9.6e-88 327.8 246 65.4
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.2e-83 312.4 251 82.1
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 8.4e-76 288.1 247 76.9
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.6e-71 273.9 374 38.8
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 4.2e-67 259.2 247 69.6
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 7.4e-64 248.4 138 82.6
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 9.7e-64 248.1 228 54.4
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.8e-63 246.5 191 64.4
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 9.1e-62 241.5 328 45.1
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.3e-57 226.9 192 54.7
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 3.3e-56 223.0 126 81.0
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.5e-51 206.8 124 73.4
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.9e-45 185.7 94 89.4
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 8.6e-20 102.1 87 64.4
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 4.0e-17 93.2 85 51.8
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.8e-09 67.8 42 69.0
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.0e-08 64.3 41 70.7
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 3.4e-08 63.5 57 57.9
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-06 55.8 61 44.3


User provided reference genes

Program Settings