Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 1.4e-157 559.7 305 100.0
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 2.5e-82 309.7 280 61.8
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 4.0e-80 302.4 275 62.5
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 2.6e-79 299.7 263 66.9
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 3.8e-78 295.8 271 67.2
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.9e-77 293.5 270 61.5
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 2.4e-77 293.1 272 61.0
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 2.4e-77 293.1 272 65.1
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 4.2e-77 292.4 268 61.6
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 9.3e-77 291.2 268 61.9
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 9.3e-77 291.2 272 61.4
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 2.1e-76 290.0 254 64.6
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 2.7e-76 289.7 271 60.1
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.0e-75 287.7 271 60.1
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 3.0e-75 286.2 264 63.3
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.5e-74 283.9 268 60.4
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.5e-74 283.9 268 64.6
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 3.3e-74 282.7 271 64.6
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 4.3e-74 282.3 282 55.3
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 7.3e-74 281.6 274 59.1
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 1.6e-73 280.4 273 59.0
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 4.8e-73 278.9 269 58.4
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 4.8e-73 278.9 282 55.0
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 6.2e-73 278.5 277 60.3
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 6.2e-73 278.5 228 70.6
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 1.1e-72 277.7 254 62.2
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.4e-72 277.3 274 65.7
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.4e-72 277.3 268 61.9
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 2.4e-72 276.6 275 64.0
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 2.4e-72 276.6 246 61.8
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 3.1e-72 276.2 262 59.5
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 3.1e-72 276.2 272 59.2
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 4.0e-72 275.8 282 56.7
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 5.3e-72 275.4 274 64.6
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 6.9e-72 275.0 272 62.1
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 2.0e-71 273.5 273 60.4
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 2.6e-71 273.1 262 62.2
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 2.6e-71 273.1 245 60.8
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 9.9e-71 271.2 236 61.0
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 1.3e-70 270.8 244 60.7
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.3e-70 270.8 279 59.5
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 1.7e-70 270.4 270 55.2
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 2.2e-70 270.0 247 64.8
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.1e-69 267.7 278 56.1
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 2.4e-69 266.5 178 77.0
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 7.1e-69 265.0 273 52.7
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 1.2e-68 264.2 183 77.0
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 2.7e-68 263.1 268 66.0
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 4.6e-68 262.3 273 52.0
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.6e-68 262.3 245 60.4
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 7.9e-68 261.5 217 62.7
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.3e-67 260.8 269 58.4
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 1.3e-67 260.8 184 67.9
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 3.0e-67 259.6 273 52.0
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 3.0e-67 259.6 236 58.5
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 3.9e-67 259.2 273 51.6
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 5.1e-67 258.8 271 58.7
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.9e-66 256.9 239 59.8
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 3.3e-66 256.1 279 58.8
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 9.6e-66 254.6 258 54.7
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 1.3e-65 254.2 174 70.7
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 1.3e-65 254.2 260 53.1
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.1e-65 253.4 258 53.9
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 2.1e-65 253.4 222 60.8
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 6.2e-65 251.9 270 60.7
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.1e-64 251.1 291 48.8
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 1.4e-64 250.8 182 67.0
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 1.8e-64 250.4 280 55.0
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 4.0e-64 249.2 268 51.9
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 9.0e-64 248.1 252 55.2
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.5e-63 247.3 252 61.1
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 1.5e-63 247.3 241 59.8
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 2.6e-63 246.5 179 68.2
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.4e-63 246.1 265 50.9
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 4.5e-63 245.7 252 57.9
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 5.8e-63 245.4 265 50.6
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 5.8e-63 245.4 179 67.6
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.2e-62 243.4 269 55.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 4.9e-62 242.3 183 66.7
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 6.4e-62 241.9 316 50.3
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 7.1e-61 238.4 179 63.7
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 7.1e-61 238.4 255 56.5
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 1.2e-60 237.7 260 56.5
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.7e-60 236.5 186 62.4
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 3.5e-60 236.1 290 47.6
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 3.9e-59 232.6 253 52.6
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 1.1e-56 224.6 237 51.9
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 4.0e-56 222.6 184 63.6
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.9e-54 216.5 181 60.2
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 6.5e-54 215.3 184 65.2
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 6.0e-52 208.8 271 45.0
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 3.1e-48 196.4 189 62.4
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 3.1e-48 196.4 214 50.9
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.0e-46 191.4 137 67.2
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 1.0e-43 181.4 175 52.6
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 1.1e-42 177.9 166 62.7
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 7.4e-42 175.3 178 49.4
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 2.8e-41 173.3 202 56.4
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 2.9e-38 163.3 186 45.2
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-36 155.6 178 44.4
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 5.1e-35 152.5 164 51.8
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 4.1e-32 142.9 110 66.4
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 2.1e-28 130.6 91 69.2
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 3.3e-26 123.2 185 41.1
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 4.8e-25 119.4 106 62.3
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.7e-22 110.9 84 67.9
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.5e-21 107.8 112 54.5
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 7.5e-18 95.5 151 36.4
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 4.5e-15 86.3 87 54.0
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 7.7e-15 85.5 76 55.3
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 2.7e-12 77.0 48 81.2


User provided reference genes

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