Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44802 Davidia involucrata HOM05D006385 ORTHO05D007948 4.0e-78 294.7 147 100.0
Sc23g0000390 Simmondsia chinensis HOM05D006385 ORTHO05D007948 5.2e-33 144.8 78 87.2
CiPaw.16G033200 Carya illinoinensis HOM05D006385 ORTHO05D007948 3.3e-32 142.1 78 89.7
Thecc.08G102700 Theobroma cacao HOM05D006385 ORTHO05D007948 3.3e-32 142.1 78 87.2
GSVIVG01009079001 Vitis vinifera HOM05D006385 ORTHO05D007948 3.3e-32 142.1 78 88.5
AUR62018967 Chenopodium quinoa HOM05D006385 ORTHO05D007948 5.7e-32 141.4 78 87.2
AUR62027809 Chenopodium quinoa HOM05D006385 ORTHO05D007948 5.7e-32 141.4 78 87.2
Manes.18G064300 Manihot esculenta HOM05D006385 ORTHO05D007948 7.5e-32 141.0 78 85.9
Nn3g19220 Nelumbo nucifera HOM05D006385 ORTHO05D007948 9.7e-32 140.6 78 85.9
QL02p002481 Quercus lobata HOM05D006385 ORTHO05D007948 1.7e-31 139.8 78 87.2
CSS0028326 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 2.8e-31 139.0 78 88.5
CSS0032215 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 2.8e-31 139.0 78 88.5
Duzib093G1818 Durio zibethinus HOM05D006385 ORTHO05D007948 2.8e-31 139.0 78 84.6
Aqoxy3G02613 Aquilegia oxysepala HOM05D006385 ORTHO05D007948 3.7e-31 138.7 78 85.9
Glyma.14G177200 Glycine max HOM05D006385 ORTHO05D007948 3.7e-31 138.7 78 85.9
RcHm_v2.0_Chr7g0242391 Rosa chinensis HOM05D006385 ORTHO05D007948 3.7e-31 138.7 78 87.2
TAR629G0260 Trochodendron aralioides HOM05D006385 ORTHO05D007948 4.8e-31 138.3 78 83.3
QL02p002520 Quercus lobata HOM05D006385 ORTHO05D007948 6.3e-31 137.9 78 87.2
Actinidia33123 Actinidia chinensis HOM05D006385 ORTHO05D007948 8.2e-31 137.5 78 85.9
Actinidia37405 Actinidia chinensis HOM05D006385 ORTHO05D007948 8.2e-31 137.5 78 85.9
Cfa017889 Carpinus fangiana HOM05D006385 ORTHO05D007948 8.2e-31 137.5 78 83.3
Potri.005G161900 Populus trichocarpa HOM05D006385 ORTHO05D007948 8.2e-31 137.5 78 84.6
Gorai.010G038200 Gossypium raimondii HOM05D006385 ORTHO05D007948 1.1e-30 137.1 78 83.3
Atru.chr13.1121 Acer truncatum HOM05D006385 ORTHO05D007948 1.4e-30 136.7 78 84.6
FvH4_5g36620 Fragaria vesca HOM05D006385 ORTHO05D007948 1.8e-30 136.3 78 85.9
FAN04G2124 Fragaria x ananassa HOM05D006385 ORTHO05D007948 1.8e-30 136.3 78 85.9
FAN08G3484 Fragaria x ananassa HOM05D000076 ORTHO05D002730 1.8e-30 136.3 78 85.9
Nitab4.5_0010488g0040 Nicotiana tabacum HOM05D006385 ORTHO05D007948 1.8e-30 136.3 78 82.1
Sabra05G0122400 Salix brachista HOM05D000076 ORTHO05D007948 1.8e-30 136.3 78 84.6
Eucgr.F00373 Eucalyptus grandis HOM05D006385 ORTHO05D007948 2.4e-30 136.0 78 84.6
Gohir.A06G033800 Gossypium hirsutum HOM05D006385 ORTHO05D007948 2.4e-30 136.0 78 82.1
HPP92_021090 Vanilla planifolia HOM05D006385 ORTHO05D007948 2.4e-30 136.0 78 83.3
ClCG11G014260 Citrullus lanatus HOM05D006385 ORTHO05D007948 3.1e-30 135.6 78 84.6
Hma1.2p1_0593F.1_g185660 Hydrangea macrophylla HOM05D006385 ORTHO05D007948 3.1e-30 135.6 78 84.6
Hund16889 Selenicereus undatus HOM05D006385 ORTHO05D007948 3.1e-30 135.6 78 84.6
Haze_18272 Corylus avellana HOM05D006385 ORTHO05D007948 4.1e-30 135.2 78 82.1
Haze_18276 Corylus avellana HOM05D006385 ORTHO05D007948 4.1e-30 135.2 78 82.1
Glyma.02G209000 Glycine max HOM05D006385 ORTHO05D007948 4.1e-30 135.2 78 83.3
Aa31LG9G14680 Aethionema arabicum HOM05D006385 ORTHO05D007948 5.3e-30 134.8 78 80.8
AT4G09010 Arabidopsis thaliana HOM05D006385 ORTHO05D007948 5.3e-30 134.8 78 82.1
CSS0041418 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 5.3e-30 134.8 78 84.6
THA.LOC104813110 Tarenaya hassleriana HOM05D006385 ORTHO05D007948 5.3e-30 134.8 78 83.3
ATR0829G184 Amborella trichopoda HOM05D006385 ORTHO05D007948 7.0e-30 134.4 78 82.1
AL6G41510 Arabidopsis lyrata HOM05D006385 ORTHO05D007948 7.0e-30 134.4 78 82.1
Carub.0006s2759 Capsella rubella HOM05D006385 ORTHO05D007948 7.0e-30 134.4 78 82.1
BraA03t12039Z Brassica rapa HOM05D006385 ORTHO05D007948 9.1e-30 134.0 78 83.3
CsaV3_3G047650 Cucumis sativus L. HOM05D006385 ORTHO05D007948 9.1e-30 134.0 78 83.3
MD15G1373900 Malus domestica HOM05D006385 ORTHO05D007948 9.1e-30 134.0 78 83.3
Peaxi162Scf00030g02222 Petunia axillaris HOM05D006385 ORTHO05D007948 9.1e-30 134.0 78 83.3
Phvul.008G176700 Phaseolus vulgaris HOM05D006385 ORTHO05D007948 9.1e-30 134.0 78 82.1
Ciclev10001685m.g Citrus clementina HOM05D006385 ORTHO05D007948 1.2e-29 133.7 78 83.3
Gohir.D06G034700 Gossypium hirsutum HOM05D006385 ORTHO05D007948 1.2e-29 133.7 78 82.1
Lj1g0021451 Lotus japonicus HOM05D006385 ORTHO05D007948 1.2e-29 133.7 78 82.1
VMungo0647G2510 Vigna mungo HOM05D006385 ORTHO05D007948 1.2e-29 133.7 78 82.1
PSO063G4930 Papaver somniferum HOM05D006385 ORTHO05D007948 1.6e-29 133.3 78 79.5
PGR042G2954 Punica granatum HOM05D006385 ORTHO05D007948 1.6e-29 133.3 78 84.6
CARHR260020 Cardamine hirsuta HOM05D006385 ORTHO05D007948 2.0e-29 132.9 78 79.5
Ah.05g169700 Amaranthus hybridus HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 80.8
CDE11G0329 Ceratophyllum demersum HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 80.8
DCAR_012886 Daucus carota HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 80.8
Migut.C00083 Erythranthe guttata HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 82.1
FAN04G2677 Fragaria x ananassa HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 84.6
Prupe.1G522500 Prunus persica HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 82.1
TWI56G0191 Tripterygium wilfordii HOM05D006385 ORTHO05D007948 2.7e-29 132.5 78 83.3
RcHm_v2.0_Chr7g0242491 Rosa chinensis HOM05D006385 ORTHO05D007948 3.5e-29 132.1 78 83.3
Sed0018010 Sechium edule HOM05D006385 ORTHO05D007948 3.5e-29 132.1 78 80.8
BcaC01g04743 Brassica carinata HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
A03p28350 Brassica napus HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
C03p34260 Brassica napus HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
BolC3t15735H Brassica oleracea HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
Thhalv10028739m.g Eutrema salsugineum HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
PSO782G1429 Papaver somniferum HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 79.5
SalBow7G0771 Salvia bowleyana HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
Sp6g08630 Schrenkiella parvula HOM05D006385 ORTHO05D007948 4.5e-29 131.7 78 82.1
Medtr5g064610 Medicago truncatula HOM05D006385 ORTHO05D007948 5.9e-29 131.3 78 79.5
CANSAT25G3491 Cannabis sativa HOM05D006385 ORTHO05D007948 7.7e-29 131.0 78 82.1
CAN.G857.10 Capsicum annuum HOM05D006385 ORTHO05D007948 7.7e-29 131.0 78 78.2
BcaB01g02829 Brassica carinata HOM05D006385 ORTHO05D007948 1.0e-28 130.6 78 82.1
Ca_05312_v3 Cicer arietinum L. HOM05D006385 ORTHO05D007948 1.3e-28 130.2 78 76.9
Lalb_Chr17g0344281 Lupinus albus HOM05D006385 ORTHO05D007948 2.2e-28 129.4 78 80.8
MSTRG.24988 Avicennia marina HOM05D006385 ORTHO05D007948 2.9e-28 129.0 78 80.8
COL.COLO4_12014 Corchorus olitorius HOM05D006385 ORTHO05D007948 2.9e-28 129.0 78 79.5
Sopen04g029620 Solanum pennellii HOM05D006385 ORTHO05D007948 2.9e-28 129.0 78 78.2
PGSC0003DMG400030834 Solanum tuberosum HOM05D006385 ORTHO05D007948 2.9e-28 129.0 78 78.2
Rhsim07G0205000 Rhododendron simsii HOM05D006385 ORTHO05D007948 3.8e-28 128.6 78 79.5
TPR.G31376 Trifolium pratense HOM05D006385 ORTHO05D007948 5.0e-28 128.3 78 78.2
HanXRQChr05g0149631 Helianthus annuus HOM05D006385 ORTHO05D007948 6.5e-28 127.9 78 79.5
EL10Ac1g01150 Beta vulgaris HOM05D006385 ORTHO05D007948 8.5e-28 127.5 78 80.8
ECA247G1006 Erigeron canadensis HOM05D006385 ORTHO05D007948 2.5e-27 125.9 78 78.2
Zm00001eb071800 Zea mays HOM05D006385 ORTHO05D007948 4.2e-27 125.2 78 78.2
Solyc04g074640.4 Solanum lycopersicum HOM05D006385 ORTHO05D007948 7.2e-27 124.4 78 74.4
arahy.Tifrunner.gnm1.ann1.5I6DN4 Arachis hypogaea HOM05D006385 ORTHO05D007948 2.1e-26 122.9 78 76.9
arahy.Tifrunner.gnm1.ann1.A6MVZL Arachis hypogaea HOM05D006385 ORTHO05D007948 2.1e-26 122.9 78 76.9
Os04g0602100 Oryza sativa ssp. japonica HOM05D006385 ORTHO05D007948 8.0e-26 120.9 78 75.6
unitig_578.g16554 Utricularia gibba HOM05D006385 ORTHO05D007948 8.0e-26 120.9 70 84.3
Lsat_1_v5_gn_1_3240 Lactuca sativa HOM05D006385 ORTHO05D007948 1.0e-25 120.6 78 74.4
Lj4A97T74 Lonicera japonica HOM05D006385 ORTHO05D007948 1.0e-25 120.6 78 75.6
Nitab4.5_0000786g0090 Nicotiana tabacum HOM05D006385 ORTHO05D007948 5.2e-25 118.2 78 75.6
vmacro04711 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 1.3e-23 113.6 115 56.5
CBR_g39625 Chara braunii HOM05D006385 ORTHO05D007948 1.2e-21 107.1 68 73.5
Pp3c1_18860 Physcomitrium patens HOM05D006385 ORTHO05D007948 2.3e-20 102.8 67 74.6
Pp3c2_15430 Physcomitrium patens HOM05D006385 ORTHO05D007948 8.6e-20 100.9 67 73.1
Mapoly0019s0014 Marchantia polymorpha HOM05D006385 ORTHO05D007948 1.1e-19 100.5 74 66.2
SMO331G0009 Selaginella moellendorffii HOM05D006385 ORTHO05D007948 1.0e-17 94.0 74 62.2
AagrBONN_evm.TU.Sc2ySwM_368.1614 Anthoceros agrestis HOM05D006385 ORTHO05D007948 4.9e-15 85.1 74 52.7
FAN04G3079 Fragaria x ananassa HOM05D006385 ORTHO05D007948 3.5e-13 79.0 46 80.4
FAN04G3219 Fragaria x ananassa HOM05D006385 ORTHO05D007948 3.5e-13 79.0 46 80.4
Cc10_g06720 Coffea canephora HOM05D006385 ORTHO05D007948 5.9e-13 78.2 42 85.7
SGA_v2.0_scaffold69G23149 Striga asiatica HOM05D006385 ORTHO05D007948 5.0e-12 75.1 50 70.0
Oeu029745.1 Olea europaea HOM05D006385 ORTHO05D007948 2.8e-10 69.3 42 76.2
SGA_v2.0_scaffold105G30294 Striga asiatica HOM05D006385 ORTHO05D007948 6.1e-10 68.2 44 72.7
vmacro04724 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 1.4e-09 67.0 49 67.3
Cc10_g06730 Coffea canephora HOM05D006385 ORTHO05D007948 1.8e-09 66.6 36 88.9


User provided reference genes

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