Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44797 Davidia involucrata HOM05D002457 ORTHO05D005750 1.4e-181 639.4 298 100.0
Dinv19118 Davidia involucrata HOM05D002457 ORTHO05D005750 9.5e-143 510.4 328 75.3
CSS0003030 Camellia sinensis var. sinensis HOM05D002457 ORTHO05D005750 2.6e-116 422.5 334 63.8
Actinidia10339 Actinidia chinensis HOM05D002457 ORTHO05D005750 6.4e-115 417.9 331 63.7
TAR381G1374 Trochodendron aralioides HOM05D002457 ORTHO05D005750 3.5e-113 412.1 333 61.3
MD15G1372700 Malus domestica HOM05D002457 ORTHO05D005750 2.8e-110 402.5 330 59.7
vmacro21299 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 8.1e-110 401.0 333 61.3
vmacro21245 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 2.4e-109 399.4 333 61.0
MD08G1186800 Malus domestica HOM05D002457 ORTHO05D005750 3.1e-109 399.1 330 59.1
GSVIVG01009071001 Vitis vinifera HOM05D002457 ORTHO05D005750 6.9e-109 397.9 324 61.7
Rhsim06G0078900 Rhododendron simsii HOM05D002457 ORTHO05D005750 5.8e-108 394.8 333 60.4
Cfa013661 Carpinus fangiana HOM05D002457 ORTHO05D005750 4.9e-107 391.7 330 59.1
Prupe.1G521300 Prunus persica HOM05D002457 ORTHO05D005750 9.3e-106 387.5 329 57.4
Ciclev10000161m.g Citrus clementina HOM05D002457 ORTHO05D005750 3.0e-104 382.5 329 56.8
Manes.18G065400 Manihot esculenta HOM05D002457 ORTHO05D005750 1.6e-102 376.7 330 56.4
Thecc.08G103800 Theobroma cacao HOM05D002457 ORTHO05D005750 4.8e-102 375.2 326 56.7
QL12p037399 Quercus lobata HOM05D002457 ORTHO05D005750 1.8e-101 373.2 330 57.6
QL12p038698 Quercus lobata HOM05D002457 ORTHO05D005750 1.8e-101 373.2 330 57.6
Haze_22295 Corylus avellana HOM05D002457 ORTHO05D005750 4.0e-101 372.1 330 57.9
Aqoxy6G00731 Aquilegia oxysepala HOM05D002457 ORTHO05D005750 1.5e-100 370.2 329 55.3
RcHm_v2.0_Chr7g0243351 Rosa chinensis HOM05D002457 ORTHO05D005750 3.4e-100 369.0 330 55.5
RcHm_v2.0_Chr7g0243141 Rosa chinensis HOM05D002457 ORTHO05D005750 4.5e-100 368.6 330 55.5
Atru.chr13.1133 Acer truncatum HOM05D002457 ORTHO05D005750 7.6e-100 367.9 330 54.8
CiPaw.07G177900 Carya illinoinensis HOM05D002457 ORTHO05D005750 1.3e-99 367.1 329 56.5
Lj4C97T15 Lonicera japonica HOM05D002457 ORTHO05D005750 3.8e-99 365.5 332 58.1
FvH4_5g36800 Fragaria vesca HOM05D002457 ORTHO05D005750 1.1e-98 364.0 330 54.8
Cc10_g06810 Coffea canephora HOM05D002457 ORTHO05D005750 1.9e-98 363.2 330 53.0
COL.COLO4_12026 Corchorus olitorius HOM05D002457 ORTHO05D005750 2.5e-95 352.8 323 56.7
Nn1g05429 Nelumbo nucifera HOM05D002457 ORTHO05D005750 1.6e-94 350.1 331 53.8
Potri.002G099400 Populus trichocarpa HOM05D002457 ORTHO05D005750 4.8e-94 348.6 328 53.7
Oeu054770.1 Olea europaea HOM05D002457 ORTHO05D005750 8.1e-94 347.8 331 53.8
FAN08G0375 Fragaria x ananassa HOM05D002457 ORTHO05D005750 9.0e-93 344.4 377 47.7
Gorai.002G140900 Gossypium raimondii HOM05D002457 ORTHO05D005750 2.0e-92 343.2 327 51.1
Sabra02G0078000 Salix brachista HOM05D002457 ORTHO05D005750 2.6e-92 342.8 346 50.6
Gohir.A01G132300 Gossypium hirsutum HOM05D002457 ORTHO05D005750 5.8e-92 341.7 327 50.5
Gohir.D01G115200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 1.7e-91 340.1 327 50.8
Solyc04g074490.3 Solanum lycopersicum HOM05D002457 ORTHO05D005750 2.2e-91 339.7 332 51.5
TWI12G1349 Tripterygium wilfordii HOM05D002457 ORTHO05D005750 3.8e-91 339.0 326 52.8
Glyma.06G101600 Glycine max HOM05D002457 ORTHO05D005750 4.9e-91 338.6 330 51.5
Sopen04g029500 Solanum pennellii HOM05D002457 ORTHO05D005750 6.5e-91 338.2 332 51.2
Phvul.009G032400 Phaseolus vulgaris HOM05D002457 ORTHO05D005750 3.2e-90 335.9 325 51.7
FAN18G1557 Fragaria x ananassa HOM05D002457 ORTHO05D005750 5.5e-90 335.1 377 47.2
Lalb_Chr11g0065321 Lupinus albus HOM05D002457 ORTHO05D005750 5.5e-90 335.1 326 53.7
TPR.G14216 Trifolium pratense HOM05D002457 ORTHO05D005750 1.6e-89 333.6 318 52.8
Peaxi162Scf00030g01716 Petunia axillaris HOM05D002457 ORTHO05D005750 2.1e-89 333.2 332 51.5
Nitab4.5_0000786g0170 Nicotiana tabacum HOM05D002457 ORTHO05D005750 2.7e-89 332.8 353 49.6
CANSAT54G2291 Cannabis sativa HOM05D002457 ORTHO05D005750 6.0e-89 331.6 319 53.9
arahy.Tifrunner.gnm1.ann1.Y876JP Arachis hypogaea HOM05D002457 ORTHO05D005750 1.1e-87 327.4 351 49.6
Psat5g051160 Pisum sativum HOM05D002457 ORTHO05D005750 3.3e-87 325.9 318 51.6
Eucgr.F00367 Eucalyptus grandis HOM05D002457 ORTHO05D005750 1.6e-86 323.6 330 51.5
arahy.Tifrunner.gnm1.ann1.H9D2WH Arachis hypogaea HOM05D002457 ORTHO05D005750 2.8e-86 322.8 351 49.9
PSO210G3704 Papaver somniferum HOM05D002457 ORTHO05D005750 4.8e-86 322.0 332 49.1
FAN13G1549 Fragaria x ananassa HOM05D002457 ORTHO05D005750 6.3e-86 321.6 373 46.4
Lj1g0014547 Lotus japonicus HOM05D002457 ORTHO05D005750 1.1e-85 320.9 330 49.1
Medtr3g099370 Medicago truncatula HOM05D002457 ORTHO05D005750 5.3e-85 318.5 325 50.2
CAN.G970.12 Capsicum annuum HOM05D002457 ORTHO05D005750 3.4e-84 315.8 332 49.7
MSTRG.22163 Avicennia marina HOM05D002457 ORTHO05D005750 5.9e-84 315.1 332 50.3
PSO447G0244 Papaver somniferum HOM05D002457 ORTHO05D005750 1.3e-83 313.9 331 47.7
MELO3C011038.2 Cucumis melo HOM05D002457 ORTHO05D005750 2.2e-83 313.2 320 50.0
SGA_v2.0_scaffold28G11909 Striga asiatica HOM05D002457 ORTHO05D005750 8.4e-83 311.2 315 51.7
CsaV3_2G029800 Cucumis sativus L. HOM05D002457 ORTHO05D005750 1.9e-82 310.1 320 50.6
DCAR_019216 Daucus carota HOM05D002457 ORTHO05D005750 1.2e-81 307.4 321 48.3
ClCG08G011220 Citrullus lanatus HOM05D002457 ORTHO05D005750 3.9e-80 302.4 320 48.4
Nitab4.5_0006196g0020 Nicotiana tabacum HOM05D002457 ORTHO05D005750 1.6e-78 297.0 257 57.6
FAN04G0153 Fragaria x ananassa HOM05D002457 ORTHO05D005750 2.2e-78 296.6 376 44.7
Migut.N02884 Erythranthe guttata HOM05D002457 ORTHO05D005750 3.1e-77 292.7 330 47.6
PGR042G2032 Punica granatum HOM05D002457 ORTHO05D005750 5.3e-77 292.0 320 49.1
Lsat_1_v5_gn_9_72780 Lactuca sativa HOM05D002457 ORTHO05D005750 2.0e-76 290.0 321 48.3
HanXRQChr09g0250381 Helianthus annuus HOM05D002457 ORTHO05D005750 7.7e-76 288.1 328 47.0
ATR0782G122 Amborella trichopoda HOM05D002457 ORTHO05D005750 1.0e-75 287.7 341 44.6
EL10Ac1g01165 Beta vulgaris HOM05D002457 ORTHO05D005750 1.7e-75 287.0 322 48.1
SGA_v2.0_scaffold84G26485 Striga asiatica HOM05D002457 ORTHO05D005750 6.5e-75 285.0 321 46.4
THA.LOC104810709 Tarenaya hassleriana HOM05D002457 ORTHO05D005750 1.4e-74 283.9 313 50.5
AT1G78280 Arabidopsis thaliana HOM05D002457 ORTHO05D005750 1.2e-73 280.8 320 47.2
SalBow8G1618 Salvia bowleyana HOM05D002457 ORTHO05D005750 3.6e-73 279.3 330 46.1
Aa31LG4G8280 Aethionema arabicum HOM05D002457 ORTHO05D005750 8.8e-72 274.6 319 46.7
Ah.05g169750 Amaranthus hybridus HOM05D002457 ORTHO05D005750 8.8e-72 274.6 321 46.4
Hund26976 Selenicereus undatus HOM05D002457 ORTHO05D005750 1.1e-71 274.2 329 44.1
Carub.0002s2518 Capsella rubella HOM05D002457 ORTHO05D005750 1.5e-71 273.9 320 46.2
ECA232G3235 Erigeron canadensis HOM05D002457 ORTHO05D005750 2.6e-71 273.1 302 48.3
Sp5g33400 Schrenkiella parvula HOM05D002457 ORTHO05D005750 3.3e-71 272.7 322 45.7
Gorai.009G234900 Gossypium raimondii HOM05D002457 ORTHO05D005750 6.3e-70 268.5 325 44.9
Gohir.A05G224700 Gossypium hirsutum HOM05D002457 ORTHO05D005750 8.2e-70 268.1 325 45.2
Gohir.D05G227200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 8.2e-70 268.1 325 44.9
BcaB05g25129 Brassica carinata HOM05D002457 ORTHO05D005750 3.1e-69 266.2 311 46.3
CARHR071750 Cardamine hirsuta HOM05D002457 ORTHO05D005750 6.9e-69 265.0 315 46.0
C06p52240 Brassica napus HOM05D002457 ORTHO05D005750 1.2e-68 264.2 316 45.9
BolC6t40246H Brassica oleracea HOM05D002457 ORTHO05D005750 1.2e-68 264.2 316 45.9
BcaC08g47405 Brassica carinata HOM05D002457 ORTHO05D005750 3.4e-68 262.7 316 45.6
A07p43570 Brassica napus HOM05D002457 ORTHO05D005750 3.4e-68 262.7 316 45.6
BraA07t31869Z Brassica rapa HOM05D002457 ORTHO05D005750 3.4e-68 262.7 316 45.6
AUR62027799 Chenopodium quinoa HOM05D002457 ORTHO05D005750 1.0e-67 261.2 317 45.7
Thhalv10018079m.g Eutrema salsugineum HOM05D002457 ORTHO05D005750 1.0e-67 261.2 318 45.6
CDE03G0287 Ceratophyllum demersum HOM05D002457 ORTHO05D005750 1.7e-67 260.4 285 48.4
BcaB03g16003 Brassica carinata HOM05D002457 ORTHO05D005750 3.8e-67 259.2 309 45.0
AUR62018953 Chenopodium quinoa HOM05D002457 ORTHO05D005750 1.9e-66 256.9 315 45.4
RcHm_v2.0_Chr7g0243001 Rosa chinensis HOM05D002457 ORTHO05D005750 1.6e-65 253.8 205 60.0
C02p35500 Brassica napus HOM05D002457 ORTHO05D005750 6.7e-64 248.4 309 44.7
unitig_8.g3608 Utricularia gibba HOM05D002457 ORTHO05D005750 1.1e-63 247.7 315 42.2
Cpa.g.sc36.164 Carica papaya HOM05D002457 ORTHO05D005750 3.3e-63 246.1 288 48.3
Os03g0389900 Oryza sativa ssp. japonica HOM05D002457 ORTHO05D005750 9.7e-63 244.6 318 44.0
AL2G38630 Arabidopsis lyrata HOM05D002457 ORTHO05D005750 5.3e-61 238.8 312 44.6
HPP92_011193 Vanilla planifolia HOM05D002457 ORTHO05D005750 1.0e-59 234.6 332 41.6
Zm00001eb018970 Zea mays HOM05D002457 ORTHO05D005750 1.0e-59 234.6 312 41.7
Sed0005289 Sechium edule HOM05D002457 ORTHO05D005750 5.0e-59 232.3 274 45.6
HPP92_011199 Vanilla planifolia HOM05D002457 ORTHO05D005750 8.5e-59 231.5 235 50.6
BcaC03g15804 Brassica carinata HOM05D002457 ORTHO05D005750 1.7e-54 217.2 301 41.9
Cpa.g.sc36.165 Carica papaya HOM05D002457 ORTHO05D005750 4.5e-52 209.1 184 56.5
BolC2t09568H Brassica oleracea HOM05D002457 ORTHO05D005750 6.8e-48 195.3 251 43.4
Ca_16043_v3 Cicer arietinum L. HOM05D002457 ORTHO05D005750 7.0e-45 185.3 210 45.2
SEGI_24064 Sequoiadendron giganteum HOM05D002457 ORTHO05D005750 5.5e-42 175.6 225 44.9
MBI02_g27963_MAGBIO Magnolia biondii HOM05D002457 ORTHO05D005750 1.0e-40 171.4 140 60.7
Sc23g0000320 Simmondsia chinensis HOM05D002457 ORTHO05D005750 4.0e-40 169.5 223 43.5
Mapoly0027s0020 Marchantia polymorpha HOM05D002457 ORTHO05D005750 3.5e-36 156.4 257 35.4
SMO351G0300 Selaginella moellendorffii HOM05D002457 ORTHO05D005750 7.7e-36 155.2 300 33.3
AagrBONN_evm.TU.Sc2ySwM_228.4998 Anthoceros agrestis HOM05D002457 ORTHO05D005750 2.9e-30 136.7 323 30.7
Pp3c7_15150 Physcomitrium patens HOM05D002457 ORTHO05D005750 5.9e-28 129.0 253 31.2
Ca_14149_v3 Cicer arietinum L. HOM05D000298 ORTHO05D000553 5.0e-27 125.9 172 40.7
Glyma.04G100002 Glycine max HOM05D002457 ORTHO05D005750 1.2e-25 121.3 146 42.5
Pp3c11_17580 Physcomitrium patens HOM05D002457 ORTHO05D005750 1.6e-25 120.9 237 31.2
RcHm_v2.0_Chr7g0242931 Rosa chinensis HOM05D002457 ORTHO05D005750 1.2e-20 104.8 325 27.4
A02p22110 Brassica napus HOM05D002457 ORTHO05D005750 2.3e-19 100.5 164 38.4
HPP92_011163 Vanilla planifolia HOM05D002457 ORTHO05D005750 2.3e-19 100.5 171 32.7
RcHm_v2.0_Chr7g0242991 Rosa chinensis HOM05D002457 ORTHO05D005750 9.8e-15 85.1 43 79.1
MBI02_g33236_MAGBIO Magnolia biondii HOM05D002457 ORTHO05D005750 1.6e-12 77.8 119 34.5
PGSC0003DMG400030813 Solanum tuberosum HOM05D002457 ORTHO05D005750 3.3e-10 70.1 57 57.9


User provided reference genes

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