Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44658 Davidia involucrata HOM05D004634 ORTHO05D005502 1.3e-42 176.0 91 100.0
Dinv01013 Davidia involucrata HOM05D004634 ORTHO05D005502 1.8e-12 75.9 41 90.2
Dinv09272 Davidia involucrata HOM05D004634 ORTHO05D005502 7.7e-11 70.5 36 94.4
CSS0014782 Camellia sinensis var. sinensis HOM05D004634 ORTHO05D005502 2.1e-08 62.4 41 82.9
Cfa005282 Carpinus fangiana HOM05D004634 ORTHO05D005502 4.7e-08 61.2 42 78.6
Dinv14123 Davidia involucrata HOM05D004634 ORTHO05D005502 4.7e-08 61.2 41 80.5
CiPaw.06G120500 Carya illinoinensis HOM05D004634 ORTHO05D005502 7.9e-08 60.5 41 78.0
Lj5g0018549 Lotus japonicus HOM05D004634 ORTHO05D005502 7.9e-08 60.5 42 78.6
TAR381G1727 Trochodendron aralioides HOM05D004634 ORTHO05D005502 1.0e-07 60.1 41 78.0
ClCG02G003930 Citrullus lanatus HOM05D004634 ORTHO05D005502 1.4e-07 59.7 41 75.6
Oeu015555.1 Olea europaea HOM05D004634 ORTHO05D005502 1.8e-07 59.3 41 78.0
Phvul.007G018100 Phaseolus vulgaris HOM05D004634 ORTHO05D005502 1.8e-07 59.3 41 75.6
CiPaw.05G084700 Carya illinoinensis HOM05D004634 ORTHO05D005502 2.3e-07 58.9 39 79.5
Hma1.2p1_0163F.1_g072640 Hydrangea macrophylla HOM05D004634 ORTHO05D005502 2.3e-07 58.9 41 75.6
CSS0049403 Camellia sinensis var. sinensis HOM05D004634 ORTHO05D005502 3.0e-07 58.5 41 75.6
Lj5A177T58 Lonicera japonica HOM05D004634 ORTHO05D005502 3.0e-07 58.5 41 75.6
Psat6g232600 Pisum sativum HOM05D004634 ORTHO05D005502 3.0e-07 58.5 41 75.6
VMungo0720G0537 Vigna mungo HOM05D004634 ORTHO05D005502 3.0e-07 58.5 41 75.6
Zm00001eb402730 Zea mays HOM05D004634 ORTHO05D005502 3.0e-07 58.5 41 70.7
MD05G1124500 Malus domestica HOM05D004634 ORTHO05D005502 3.9e-07 58.2 41 75.6
MD10G1127300 Malus domestica HOM05D004634 ORTHO05D005502 3.9e-07 58.2 41 75.6
Ah.01g008170 Amaranthus hybridus HOM05D004634 ORTHO05D005502 5.1e-07 57.8 41 73.2
Dinv41921 Davidia involucrata HOM05D004634 ORTHO05D005502 5.1e-07 57.8 41 75.6
Glyma.20G106600 Glycine max HOM05D004634 ORTHO05D005502 5.1e-07 57.8 41 75.6
Nn5g30833 Nelumbo nucifera HOM05D004634 ORTHO05D005502 5.1e-07 57.8 41 73.2
TAR376G0880 Trochodendron aralioides HOM05D004634 ORTHO05D005502 5.1e-07 57.8 41 73.2
Aqoxy6G02026 Aquilegia oxysepala HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 73.2
HanXRQChr17g0544171 Helianthus annuus HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 73.2
Lsat_1_v5_gn_3_47561 Lactuca sativa HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 73.2
Nn6g31925 Nelumbo nucifera HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 73.2
PSO170G0173 Papaver somniferum HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 73.2
PSO210G1566 Papaver somniferum HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 73.2
PGR042G2401 Punica granatum HOM05D004634 ORTHO05D005502 6.7e-07 57.4 41 75.6
Ciclev10028955m.g Citrus clementina HOM05D004634 ORTHO05D005502 8.8e-07 57.0 41 75.6
Medtr1g112860 Medicago truncatula HOM05D004634 ORTHO05D005502 8.8e-07 57.0 41 73.2
QL11p051507 Quercus lobata HOM05D004634 ORTHO05D005502 8.8e-07 57.0 41 70.7
TPR.G2419 Trifolium pratense HOM05D004634 ORTHO05D005502 8.8e-07 57.0 41 73.2
TWI31G0086 Tripterygium wilfordii HOM05D004634 ORTHO05D005502 1.1e-06 56.6 41 73.2
GSVIVG01023991001 Vitis vinifera HOM05D004634 ORTHO05D005502 1.1e-06 56.6 41 75.6
Atru.chr5.3387 Acer truncatum HOM05D004634 ORTHO05D005502 1.5e-06 56.2 42 73.8
Duzib052G0999 Durio zibethinus HOM05D004634 ORTHO05D005502 1.5e-06 56.2 41 75.6
SGA_v2.0_scaffold58G20350 Striga asiatica HOM05D004634 ORTHO05D005502 1.5e-06 56.2 41 70.7
THA.LOC104824757 Tarenaya hassleriana HOM05D004634 ORTHO05D005502 1.5e-06 56.2 42 73.8
Thecc.02G056100 Theobroma cacao HOM05D004634 ORTHO05D005502 1.5e-06 56.2 41 75.6
Actinidia20523 Actinidia chinensis HOM05D004634 ORTHO05D005502 2.0e-06 55.8 41 73.2
Ca_03299_v3 Cicer arietinum L. HOM05D004634 ORTHO05D005502 2.0e-06 55.8 41 73.2
COL.COLO4_17371 Corchorus olitorius HOM05D004634 ORTHO05D005502 2.0e-06 55.8 41 75.6
Glyma.10G283100 Glycine max HOM05D004634 ORTHO05D005502 2.0e-06 55.8 41 73.2
Potri.004G177300 Populus trichocarpa HOM05D004634 ORTHO05D005502 2.0e-06 55.8 41 73.2
unitig_744.g24280 Utricularia gibba HOM05D004634 ORTHO05D005502 2.0e-06 55.8 41 65.9
MSTRG.19978 Avicennia marina HOM05D004634 ORTHO05D005502 2.6e-06 55.5 41 70.7
Migut.N01330 Erythranthe guttata HOM05D004634 ORTHO05D005502 2.6e-06 55.5 41 65.9
Prupe.8G168200 Prunus persica HOM05D004634 ORTHO05D005502 2.6e-06 55.5 41 73.2
Zm00001eb003030 Zea mays HOM05D004634 ORTHO05D005502 2.6e-06 55.5 41 68.3
Gohir.A12G036500 Gossypium hirsutum HOM05D004634 ORTHO05D005502 3.3e-06 55.1 41 75.6
Gohir.D12G036100 Gossypium hirsutum HOM05D004634 ORTHO05D005502 3.3e-06 55.1 41 75.6
Gorai.008G037300 Gossypium raimondii HOM05D004634 ORTHO05D005502 3.3e-06 55.1 41 75.6
MBI05_g00175_MAGBIO Magnolia biondii HOM05D004634 ORTHO05D005502 3.3e-06 55.1 41 68.3
vmacro02287 Vaccinium macrocarpon HOM05D004634 ORTHO05D005502 3.3e-06 55.1 41 70.7
AUR62010016 Chenopodium quinoa HOM05D004634 ORTHO05D005502 4.4e-06 54.7 41 68.3
Duzib132G0372 Durio zibethinus HOM05D004634 ORTHO05D005502 4.4e-06 54.7 41 73.2
ECA246G0918 Erigeron canadensis HOM05D004634 ORTHO05D005502 4.4e-06 54.7 41 68.3
Actinidia37338 Actinidia chinensis HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
Cpa.g.sc20.107 Carica papaya HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 68.3
Duzib248G1349 Durio zibethinus HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 73.2
Migut.B00062 Erythranthe guttata HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 68.3
FvH4_2g15590 Fragaria vesca HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
FAN15G1522 Fragaria x ananassa HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
FAN20G2203 Fragaria x ananassa HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
FAN24G0083 Fragaria x ananassa HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
Hma1.2p1_0032F.1_g019265 Hydrangea macrophylla HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
Manes.11G097500 Manihot esculenta HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 68.3
Potri.009G137600 Populus trichocarpa HOM05D004634 ORTHO05D005502 5.7e-06 54.3 41 70.7
Manes.04G071300 Manihot esculenta HOM05D004634 ORTHO05D005502 7.4e-06 53.9 41 70.7
Sed0028226 Sechium edule HOM05D004634 ORTHO05D005502 7.4e-06 53.9 41 68.3
Aa31LG6G16660 Aethionema arabicum HOM05D004634 ORTHO05D005502 9.7e-06 53.5 42 71.4
CANSAT25G1088 Cannabis sativa HOM05D004634 ORTHO05D005502 9.7e-06 53.5 41 68.3
MELO3C013335.2 Cucumis melo HOM05D004634 ORTHO05D005502 9.7e-06 53.5 41 65.9
Eucgr.G01787 Eucalyptus grandis HOM05D004634 ORTHO05D005502 9.7e-06 53.5 41 68.3
Sabra04G0119200 Salix brachista HOM05D004634 ORTHO05D005502 9.7e-06 53.5 41 68.3


User provided reference genes

Program Settings