Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 0.0e+00 1123.2 588 100.0
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 3.6e-146 522.7 761 47.8
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 1.2e-83 315.1 744 38.3
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 1.6e-69 268.1 826 31.0
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 4.4e-67 260.0 138 94.9
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.9e-66 257.3 816 31.7
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 8.3e-66 255.8 809 31.0
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 3.6e-61 240.4 788 31.2
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 9.8e-59 232.3 792 31.1
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 3.7e-58 230.3 661 34.0
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 9.2e-57 225.7 762 30.6
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.6e-53 214.9 763 30.8
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 3.6e-53 213.8 850 28.8
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-46 192.2 247 53.8
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.1e-41 175.6 889 26.3
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.9e-41 174.9 774 28.6
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 7.8e-40 169.5 212 47.6
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 3.6e-37 160.6 303 37.6
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 9.0e-36 156.0 302 38.4
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 2.0e-35 154.8 745 27.1
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 3.4e-35 154.1 646 28.9
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 4.2e-33 147.1 712 27.9
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 7.1e-33 146.4 722 28.8
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 8.1e-29 132.9 581 28.6
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 1.1e-28 132.5 734 25.9
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 1.2e-27 129.0 530 29.2
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 3.4e-27 127.5 755 25.7
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 7.6e-27 126.3 597 28.6
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 9.9e-27 125.9 734 26.6
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 1.4e-25 122.1 489 26.8
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 1.4e-25 122.1 217 39.6
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 1.6e-24 118.6 468 30.1
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 2.1e-24 118.2 242 37.6
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 7.9e-24 116.3 558 28.7
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.1e-22 112.5 270 32.6
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 9.6e-22 109.4 539 28.0
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 2.1e-21 108.2 666 25.8
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 3.7e-21 107.5 175 44.0
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 4.8e-21 107.1 666 25.8
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.8e-20 105.1 609 25.3
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 2.4e-20 104.8 716 25.4
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.1e-20 104.4 196 39.3
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 1.5e-19 102.1 196 38.8
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.5e-19 102.1 666 26.9
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.5e-19 102.1 136 44.1
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.0e-18 99.4 639 26.3
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 1.7e-18 98.6 542 24.7
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 2.2e-18 98.2 602 24.9
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.5e-17 94.7 779 24.8
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 2.5e-17 94.7 701 25.2
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.2e-17 94.4 253 33.6
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.2e-17 94.4 253 33.6
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 4.2e-17 94.0 560 25.5
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 4.6e-16 90.5 166 36.1
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 6.0e-16 90.1 618 24.9
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 1.3e-15 89.0 539 28.4
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 7.4e-14 83.2 485 26.4
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 2.1e-13 81.6 384 26.3
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 4.1e-12 77.4 188 32.4
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 4.1e-12 77.4 407 28.7
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 1.2e-11 75.9 543 25.2
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 3.4e-11 74.3 188 31.4
Actinidia40109 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.3e-10 72.4 547 24.3
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 1.7e-10 72.0 508 25.0
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.4e-09 68.9 329 26.1
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 7.9e-08 63.2 514 24.9
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 1.0e-07 62.8 199 31.2
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 1.5e-06 58.9 271 26.6
Sabra10G0062200 Salix brachista HOM05D008144 ORTHO05D010081 3.3e-06 57.8 141 34.0
Lj3P721T43 Lonicera japonica HOM05D008144 ORTHO05D010081 9.7e-06 56.2 201 31.3


User provided reference genes

Program Settings