Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44570 Davidia involucrata HOM05D000585 ORTHO05D003019 1.7e-76 289.3 146 100.0
Dinv14037 Davidia involucrata HOM05D000585 ORTHO05D003019 2.6e-29 132.5 98 79.6
GSVIVG01018029001 Vitis vinifera HOM05D000585 ORTHO05D003019 1.8e-22 109.8 101 67.3
Duzib052G0772 Durio zibethinus HOM05D000585 ORTHO05D003019 1.5e-21 106.7 101 60.4
Potri.010G082600 Populus trichocarpa HOM05D000585 ORTHO05D003019 1.5e-21 106.7 111 55.9
TAR362G0507 Trochodendron aralioides HOM05D000585 ORTHO05D003019 2.0e-21 106.3 101 60.4
Cc03_g04190 Coffea canephora HOM05D000585 ORTHO05D003019 4.5e-21 105.1 104 58.7
Thecc.04G237400 Theobroma cacao HOM05D000585 ORTHO05D003019 4.5e-21 105.1 100 61.0
Potri.008G156700 Populus trichocarpa HOM05D000585 ORTHO05D003019 4.2e-19 98.6 100 58.0
Sabra08G0119300 Salix brachista HOM05D000585 ORTHO05D003019 4.2e-19 98.6 98 55.1
Haze_11226 Corylus avellana HOM05D000585 ORTHO05D003019 7.2e-19 97.8 99 62.6
Nn6g34148 Nelumbo nucifera HOM05D000585 ORTHO05D003019 3.6e-18 95.5 106 56.6
Sabra10G0060500 Salix brachista HOM05D000585 ORTHO05D003019 6.1e-18 94.7 98 59.2
Cfa008456 Carpinus fangiana HOM05D000585 ORTHO05D003019 8.0e-18 94.4 104 59.6
TAR365G0441 Trochodendron aralioides HOM05D000585 ORTHO05D003019 8.0e-18 94.4 101 56.4
TWI73G1076 Tripterygium wilfordii HOM05D000585 ORTHO05D003019 1.8e-17 93.2 101 59.4
DCAR_030682 Daucus carota HOM05D000585 ORTHO05D003019 3.0e-17 92.4 96 55.2
CiPaw.01G196600 Carya illinoinensis HOM05D000585 ORTHO05D003019 3.9e-17 92.0 97 58.8
CANSAT78G1820 Cannabis sativa HOM05D000585 ORTHO05D003019 1.5e-16 90.1 98 54.1
MD16G1198400 Malus domestica HOM05D000585 ORTHO05D003019 2.0e-16 89.7 101 58.4
TWI09G0946 Tripterygium wilfordii HOM05D000585 ORTHO05D003019 2.0e-16 89.7 100 56.0
Nitab4.5_0005470g0010 Nicotiana tabacum HOM05D000585 ORTHO05D003019 4.4e-16 88.6 104 52.9
Lj3A729T49 Lonicera japonica HOM05D000585 ORTHO05D003019 5.7e-16 88.2 86 66.3
QL06p001313 Quercus lobata HOM05D000585 ORTHO05D003019 7.4e-16 87.8 100 58.0
COL.COLO4_21550 Corchorus olitorius HOM05D000585 ORTHO05D003019 2.2e-15 86.3 110 52.7
Oeu008863.2 Olea europaea HOM05D000585 ORTHO05D003019 4.8e-15 85.1 104 56.7
Sc13g0004660 Simmondsia chinensis HOM05D000585 ORTHO05D003019 1.1e-14 84.0 72 65.3
TAR636G3099 Trochodendron aralioides HOM05D000585 ORTHO05D003019 1.8e-14 83.2 107 51.4
Lsat_1_v5_gn_7_47860 Lactuca sativa HOM05D000585 ORTHO05D003019 3.1e-14 82.4 97 53.6
Lalb_Chr03g0037411 Lupinus albus HOM05D000585 ORTHO05D003019 3.1e-14 82.4 95 53.7
Sopen09g031420 Solanum pennellii HOM05D000585 ORTHO05D003019 4.1e-14 82.0 102 53.9
Eucgr.B01029 Eucalyptus grandis HOM05D000585 ORTHO05D003019 5.3e-14 81.6 100 53.0
FAN22G2234 Fragaria x ananassa HOM05D000585 ORTHO05D003019 5.3e-14 81.6 107 53.3
Duzib212G0580 Durio zibethinus HOM05D000585 ORTHO05D003019 7.0e-14 81.3 92 52.2
Ca_10859_v3 Cicer arietinum L. HOM05D000585 ORTHO05D003019 9.1e-14 80.9 104 50.0
FAN17G1106 Fragaria x ananassa HOM05D000585 ORTHO05D003019 9.1e-14 80.9 107 53.3
Eucgr.B00932 Eucalyptus grandis HOM05D000585 ORTHO05D003019 1.2e-13 80.5 101 54.5
FAN12G2946 Fragaria x ananassa HOM05D000585 ORTHO05D003019 1.6e-13 80.1 107 51.4
Solyc09g082560.4 Solanum lycopersicum HOM05D000585 ORTHO05D003019 2.6e-13 79.3 103 47.6
Manes.15G032200 Manihot esculenta HOM05D000585 ORTHO05D003019 5.9e-13 78.2 91 53.8
Aqoxy5G00416 Aquilegia oxysepala HOM05D000585 ORTHO05D003019 1.7e-12 76.6 100 51.0
Ciclev10004919m.g Citrus clementina HOM05D000585 ORTHO05D003019 3.8e-12 75.5 90 48.9
Nitab4.5_0000085g0220 Nicotiana tabacum HOM05D000585 ORTHO05D003019 5.0e-12 75.1 78 57.7
RcHm_v2.0_Chr4g0387551 Rosa chinensis HOM05D000585 ORTHO05D003019 5.0e-12 75.1 111 51.4
FvH4_4g01000 Fragaria vesca HOM05D000585 ORTHO05D003019 8.5e-12 74.3 107 46.7
ECA240G2949 Erigeron canadensis HOM05D000585 ORTHO05D003019 1.1e-11 73.9 82 50.0
Oeu053307.1 Olea europaea HOM05D000585 ORTHO05D003019 1.5e-11 73.6 98 50.0
Rhsim02G0028400 Rhododendron simsii HOM05D000585 ORTHO05D003019 2.5e-11 72.8 63 63.5
arahy.Tifrunner.gnm1.ann1.F73KQI Arachis hypogaea HOM05D000585 ORTHO05D003019 3.2e-11 72.4 114 45.6
arahy.Tifrunner.gnm1.ann1.MLEZ7Y Arachis hypogaea HOM05D000585 ORTHO05D003019 3.2e-11 72.4 114 45.6
TPR.G25172 Trifolium pratense HOM05D000585 ORTHO05D003019 5.5e-11 71.6 96 50.0
Aqoxy2G03447 Aquilegia oxysepala HOM05D000585 ORTHO05D003019 7.2e-11 71.2 79 50.6
Gohir.A09G218500 Gossypium hirsutum HOM05D000585 ORTHO05D003019 7.2e-11 71.2 78 50.0
Gohir.D09G220820 Gossypium hirsutum HOM05D000585 ORTHO05D003019 7.2e-11 71.2 78 50.0
Gorai.006G241800 Gossypium raimondii HOM05D000585 ORTHO05D003019 7.2e-11 71.2 78 50.0
PSO210G2806 Papaver somniferum HOM05D000585 ORTHO05D003019 7.2e-11 71.2 116 46.6
PGR142G1588 Punica granatum HOM05D000585 ORTHO05D003019 7.2e-11 71.2 103 44.7
arahy.Tifrunner.gnm1.ann1.52TGP1 Arachis hypogaea HOM05D000585 ORTHO05D003019 9.4e-11 70.9 101 50.5
arahy.Tifrunner.gnm1.ann1.D45XKE Arachis hypogaea HOM05D000585 ORTHO05D003019 9.4e-11 70.9 101 50.5
Atru.chr4.2401 Acer truncatum HOM05D000585 ORTHO05D003019 1.6e-10 70.1 96 50.0
Actinidia08468 Actinidia chinensis HOM05D000585 ORTHO05D003019 1.6e-10 70.1 90 52.2
TPR.G26099 Trifolium pratense HOM05D000585 ORTHO05D003019 1.6e-10 70.1 100 48.0
Atru.chr4.2377 Acer truncatum HOM05D000585 ORTHO05D003019 2.1e-10 69.7 95 50.5
Manes.03G173900 Manihot esculenta HOM05D000585 ORTHO05D003019 2.7e-10 69.3 90 51.1
ClCG06G006420 Citrullus lanatus HOM05D000585 ORTHO05D003019 3.6e-10 68.9 60 66.7
CsaV3_2G013480 Cucumis sativus L. HOM05D000585 ORTHO05D003019 6.1e-10 68.2 103 48.5
HanXRQChr05g0143221 Helianthus annuus HOM05D000585 ORTHO05D003019 6.1e-10 68.2 99 48.5
Medtr1g103070 Medicago truncatula HOM05D000585 ORTHO05D003019 6.1e-10 68.2 105 47.6
Psat6g205440 Pisum sativum HOM05D000585 ORTHO05D003019 8.0e-10 67.8 106 46.2
PGR004G0742 Punica granatum HOM05D000585 ORTHO05D003019 8.0e-10 67.8 107 46.7
CSS0004802 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D003019 1.4e-09 67.0 97 52.6
VMungo0720G1515 Vigna mungo HOM05D000585 ORTHO05D003019 1.4e-09 67.0 107 44.9
Sed0022726 Sechium edule HOM05D000585 ORTHO05D003019 1.8e-09 66.6 102 47.1
BcaC07g37850 Brassica carinata HOM05D000585 ORTHO05D003019 2.3e-09 66.2 101 48.5
HanXRQChr03g0064051 Helianthus annuus HOM05D000585 ORTHO05D003019 2.3e-09 66.2 88 45.5
MELO3C014290.2 Cucumis melo HOM05D000585 ORTHO05D003019 3.0e-09 65.9 103 46.6
Actinidia18531 Actinidia chinensis HOM05D000585 ORTHO05D003019 4.0e-09 65.5 75 56.0
Lj5g0007146 Lotus japonicus HOM05D000585 ORTHO05D003019 4.0e-09 65.5 109 44.0
Medtr1g041430 Medicago truncatula HOM05D000585 ORTHO05D003019 4.0e-09 65.5 96 45.8
PSO170G4407 Papaver somniferum HOM05D000585 ORTHO05D003019 6.7e-09 64.7 111 43.2
Prupe.1G020000 Prunus persica HOM05D000585 ORTHO05D003019 6.7e-09 64.7 115 44.3
Glyma.10G245000 Glycine max HOM05D000585 ORTHO05D003019 1.2e-08 63.9 109 43.1
CAN.G1402.14 Capsicum annuum HOM05D000585 ORTHO05D003019 1.5e-08 63.5 120 40.0
A08p11460 Brassica napus HOM05D000585 ORTHO05D003019 2.0e-08 63.2 61 62.3
BolC8t48241H Brassica oleracea HOM05D000585 ORTHO05D003019 2.0e-08 63.2 101 47.5
BraA08t33140Z Brassica rapa HOM05D000585 ORTHO05D003019 2.0e-08 63.2 61 62.3
Peaxi162Scf00316g01115 Petunia axillaris HOM05D000585 ORTHO05D003019 2.0e-08 63.2 69 55.1
BraA01t02194Z Brassica rapa HOM05D000585 ORTHO05D003019 2.6e-08 62.8 108 43.5
Lsat_1_v5_gn_8_60501 Lactuca sativa HOM05D000585 ORTHO05D003019 3.3e-08 62.4 97 45.4
Psat6g104080 Pisum sativum HOM05D000585 ORTHO05D003019 3.3e-08 62.4 96 45.8
SGA_v2.0_scaffold191G40448 Striga asiatica HOM05D000585 ORTHO05D003019 4.4e-08 62.0 69 56.5
Aa31LG9G2620 Aethionema arabicum HOM05D000585 ORTHO05D003019 5.7e-08 61.6 101 42.6
BcaB04g18260 Brassica carinata HOM05D000585 ORTHO05D003019 5.7e-08 61.6 60 61.7
Gohir.D10G150666 Gossypium hirsutum HOM05D000585 ORTHO05D003019 7.5e-08 61.2 81 51.9
Gorai.011G167700 Gossypium raimondii HOM05D000585 ORTHO05D003019 7.5e-08 61.2 81 53.1
Sp7g12880 Schrenkiella parvula HOM05D000585 ORTHO05D003019 7.5e-08 61.2 98 46.9
MSTRG.4056 Avicennia marina HOM05D000585 ORTHO05D003019 1.3e-07 60.5 102 44.1
THA.LOC104827553 Tarenaya hassleriana HOM05D000585 ORTHO05D003019 1.7e-07 60.1 76 47.4
CANSAT54G1360 Cannabis sativa HOM05D000585 ORTHO05D003019 2.2e-07 59.7 98 43.9
BcaC09g50156 Brassica carinata HOM05D000585 ORTHO05D003019 2.8e-07 59.3 108 41.7
A01p22820 Brassica napus HOM05D000585 ORTHO05D003019 2.8e-07 59.3 108 42.6
C01p28400 Brassica napus HOM05D000585 ORTHO05D003019 2.8e-07 59.3 108 41.7
BolC1t02769H Brassica oleracea HOM05D000585 ORTHO05D003019 2.8e-07 59.3 108 41.7
CARHR221250 Cardamine hirsuta HOM05D000585 ORTHO05D003019 2.8e-07 59.3 111 40.5
Thhalv10025526m.g Eutrema salsugineum HOM05D000585 ORTHO05D003019 2.8e-07 59.3 77 51.9
Ah.01g018370 Amaranthus hybridus HOM05D000585 ORTHO05D003019 3.7e-07 58.9 77 46.8
Oeu021876.1 Olea europaea HOM05D000585 ORTHO05D003019 3.7e-07 58.9 89 40.4
Sed0026798 Sechium edule HOM05D000585 ORTHO05D003019 3.7e-07 58.9 62 58.1
MSTRG.21871 Avicennia marina HOM05D000585 ORTHO05D003019 4.8e-07 58.5 103 41.7
Sed0022543 Sechium edule HOM05D000585 ORTHO05D003019 4.8e-07 58.5 79 44.3
CDE06G1490 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 8.2e-07 57.8 99 40.4
MELO3C006504.2 Cucumis melo HOM05D000585 ORTHO05D003019 8.2e-07 57.8 79 45.6
CsaV3_3G012950 Cucumis sativus L. HOM05D000585 ORTHO05D003019 1.1e-06 57.4 79 46.8
CDE07G1410 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 1.4e-06 57.0 95 42.1
MD13G1198300 Malus domestica HOM05D000585 ORTHO05D003019 1.8e-06 56.6 100 47.0
PSO210G6900 Papaver somniferum HOM05D000585 ORTHO05D003019 1.8e-06 56.6 101 42.6
PSO832G2375 Papaver somniferum HOM05D000585 ORTHO05D003019 1.8e-06 56.6 101 42.6
Phvul.007G060900 Phaseolus vulgaris HOM05D000585 ORTHO05D003019 1.8e-06 56.6 64 54.7
HPP92_007954 Vanilla planifolia HOM05D000585 ORTHO05D003019 1.8e-06 56.6 96 43.8
Ca_12152_v3 Cicer arietinum L. HOM05D000585 ORTHO05D003019 2.4e-06 56.2 97 42.3
Glyma.02G004600 Glycine max HOM05D000585 ORTHO05D003019 2.4e-06 56.2 94 41.5
ClCG05G004910 Citrullus lanatus HOM05D000585 ORTHO05D003019 5.3e-06 55.1 90 41.1
Dinv02200 Davidia involucrata HOM05D000585 ORTHO05D003019 5.3e-06 55.1 91 41.8
ECA236G2779 Erigeron canadensis HOM05D000585 ORTHO05D003019 5.3e-06 55.1 99 42.4
Carub.0007s2739 Capsella rubella HOM05D000585 ORTHO05D003019 9.1e-06 54.3 60 55.0


User provided reference genes

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