Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44567 Davidia involucrata HOM05D006451 ORTHO05D007680 2.5e-127 458.8 228 100.0
vmacro15365 Vaccinium macrocarpon HOM05D006451 ORTHO05D007680 5.6e-111 404.4 228 85.5
CSS0023735 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 8.1e-110 400.6 227 85.5
Atru.chr4.2375 Acer truncatum HOM05D006451 ORTHO05D007680 6.9e-109 397.5 228 82.9
Actinidia08470 Actinidia chinensis HOM05D006451 ORTHO05D007680 6.9e-109 397.5 228 84.6
TWI09G1365 Tripterygium wilfordii HOM05D006451 ORTHO05D007680 5.8e-108 394.4 227 83.3
Atru.chr4.2399 Acer truncatum HOM05D006451 ORTHO05D007680 9.9e-108 393.7 228 82.0
QL06p001354 Quercus lobata HOM05D006451 ORTHO05D007680 1.3e-107 393.3 227 84.1
Rhsim02G0028200 Rhododendron simsii HOM05D006451 ORTHO05D007680 1.3e-107 393.3 227 84.1
Glyma.02G004400 Glycine max HOM05D006451 ORTHO05D007680 6.4e-107 391.0 227 81.1
Lj6g0024617 Lotus japonicus HOM05D006451 ORTHO05D007680 8.4e-107 390.6 228 82.9
Oeu058962.1 Olea europaea HOM05D006451 ORTHO05D007680 8.4e-107 390.6 227 83.3
Cfa008457 Carpinus fangiana HOM05D006451 ORTHO05D007680 1.4e-106 389.8 227 83.7
Duzib052G1229 Durio zibethinus HOM05D006451 ORTHO05D007680 4.2e-106 388.3 227 81.1
Potri.010G082900 Populus trichocarpa HOM05D006451 ORTHO05D007680 7.1e-106 387.5 227 81.1
Cc03_g04170 Coffea canephora HOM05D006451 ORTHO05D007680 9.3e-106 387.1 227 82.8
Sabra10G0060200 Salix brachista HOM05D006451 ORTHO05D007680 9.3e-106 387.1 227 80.2
Medtr1g041435 Medicago truncatula HOM05D006451 ORTHO05D007680 1.2e-105 386.7 227 81.1
Manes.15G032000 Manihot esculenta HOM05D006451 ORTHO05D007680 1.6e-105 386.3 227 81.5
COL.COLO4_21546 Corchorus olitorius HOM05D006451 ORTHO05D007680 2.1e-105 386.0 227 81.1
TAR362G1293 Trochodendron aralioides HOM05D006451 ORTHO05D007680 2.1e-105 386.0 227 80.2
Ca_12151_v3 Cicer arietinum L. HOM05D006451 ORTHO05D007680 2.7e-105 385.6 227 81.1
Thecc.04G237100 Theobroma cacao HOM05D006451 ORTHO05D007680 3.5e-105 385.2 227 81.5
Ciclev10005444m.g Citrus clementina HOM05D006451 ORTHO05D007680 4.6e-105 384.8 227 79.3
Aqoxy2G03443 Aquilegia oxysepala HOM05D006451 ORTHO05D007680 6.0e-105 384.4 227 79.3
Gohir.A01G023900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 6.0e-105 384.4 227 81.1
Gorai.002G024400 Gossypium raimondii HOM05D006451 ORTHO05D007680 2.3e-104 382.5 227 81.1
Manes.03G174100 Manihot esculenta HOM05D006451 ORTHO05D007680 2.3e-104 382.5 227 79.7
Potri.008G156500 Populus trichocarpa HOM05D006451 ORTHO05D007680 3.0e-104 382.1 227 79.7
CiPaw.01G196900 Carya illinoinensis HOM05D006451 ORTHO05D007680 3.9e-104 381.7 227 80.2
Glyma.10G003800 Glycine max HOM05D006451 ORTHO05D007680 3.9e-104 381.7 227 79.7
GSVIVG01018026001 Vitis vinifera HOM05D006451 ORTHO05D007680 3.9e-104 381.7 227 80.6
Gohir.D01G021900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 5.1e-104 381.3 227 80.6
VMungo0720G2899 Vigna mungo HOM05D006451 ORTHO05D007680 5.1e-104 381.3 228 81.6
PGSC0003DMG402007686 Solanum tuberosum HOM05D006451 ORTHO05D007680 6.6e-104 380.9 228 80.3
CsaV3_2G013500 Cucumis sativus L. HOM05D006451 ORTHO05D007680 3.3e-103 378.6 227 78.9
Psat6g104120 Pisum sativum HOM05D006451 ORTHO05D007680 3.3e-103 378.6 227 79.3
MSTRG.4055 Avicennia marina HOM05D006451 ORTHO05D007680 4.3e-103 378.3 227 79.7
CAN.G1402.12 Capsicum annuum HOM05D006451 ORTHO05D007680 7.3e-103 377.5 227 79.7
Nitab4.5_0000085g0050 Nicotiana tabacum HOM05D006451 ORTHO05D007680 7.3e-103 377.5 227 80.2
Duzib151G0283 Durio zibethinus HOM05D006451 ORTHO05D007680 9.6e-103 377.1 227 80.2
Prupe.1G019800 Prunus persica HOM05D006451 ORTHO05D007680 9.6e-103 377.1 227 78.9
Sopen09g031400 Solanum pennellii HOM05D006451 ORTHO05D007680 2.1e-102 375.9 227 78.9
THA.LOC104826059 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 2.1e-102 375.9 227 78.4
Phvul.007G277400 Phaseolus vulgaris HOM05D006451 ORTHO05D007680 4.8e-102 374.8 227 79.3
Solyc09g082540.3 Solanum lycopersicum HOM05D006451 ORTHO05D007680 8.1e-102 374.0 227 78.4
Eucgr.H03421 Eucalyptus grandis HOM05D006451 ORTHO05D007680 1.4e-101 373.2 227 78.0
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 5.3e-101 371.3 227 78.4
MD13G1198100 Malus domestica HOM05D006451 ORTHO05D007680 5.3e-101 371.3 227 78.0
arahy.Tifrunner.gnm1.ann1.E7JLC4 Arachis hypogaea HOM05D006451 ORTHO05D007680 9.0e-101 370.5 254 71.7
CANSAT78G2142 Cannabis sativa HOM05D006451 ORTHO05D007680 2.0e-100 369.4 227 76.2
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 3.4e-100 368.6 227 77.1
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 7.6e-100 367.5 227 77.1
ClCG06G006410 Citrullus lanatus HOM05D006451 ORTHO05D007680 7.6e-100 367.5 242 74.4
Sabra08G0119100 Salix brachista HOM05D006451 ORTHO05D007680 7.6e-100 367.5 227 77.1
MD16G1198200 Malus domestica HOM05D006451 ORTHO05D007680 1.7e-99 366.3 227 77.1
Sed0026394 Sechium edule HOM05D006451 ORTHO05D007680 2.2e-99 365.9 227 75.8
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 2.9e-99 365.5 227 76.2
A08p37070 Brassica napus HOM05D006451 ORTHO05D007680 2.9e-99 365.5 227 76.7
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 2.9e-99 365.5 227 76.2
BraA08t35607Z Brassica rapa HOM05D006451 ORTHO05D007680 2.9e-99 365.5 227 76.7
CSS0014602 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 6.4e-99 364.4 227 78.9
FvH4_4g00880 Fragaria vesca HOM05D006451 ORTHO05D007680 1.4e-98 363.2 227 76.7
RcHm_v2.0_Chr4g0387501 Rosa chinensis HOM05D006451 ORTHO05D007680 2.4e-98 362.5 227 76.7
MELO3C014291.2 Cucumis melo HOM05D006451 ORTHO05D007680 3.2e-98 362.1 225 75.6
BcaC07g42200 Brassica carinata HOM05D006451 ORTHO05D007680 7.1e-98 360.9 227 75.3
Lj6A610G48 Lonicera japonica HOM05D006451 ORTHO05D007680 7.1e-98 360.9 209 85.6
PGR004G2173 Punica granatum HOM05D006451 ORTHO05D007680 6.0e-97 357.8 227 75.8
ECA248G3783 Erigeron canadensis HOM05D006451 ORTHO05D007680 1.0e-96 357.1 227 74.0
PSO210G4482 Papaver somniferum HOM05D006451 ORTHO05D007680 1.3e-96 356.7 227 73.1
Lsat_1_v5_gn_1_112581 Lactuca sativa HOM05D006451 ORTHO05D007680 3.0e-96 355.5 220 76.4
PSO170G5536 Papaver somniferum HOM05D006451 ORTHO05D007680 3.9e-96 355.1 227 73.6
AUR62034703 Chenopodium quinoa HOM05D006451 ORTHO05D007680 1.1e-95 353.6 227 73.1
THA.LOC104801113 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 3.3e-95 352.1 208 79.8
HanXRQChr11g0342781 Helianthus annuus HOM05D006451 ORTHO05D007680 5.6e-95 351.3 227 73.1
Sp1g03010 Schrenkiella parvula HOM05D006451 ORTHO05D007680 3.1e-93 345.5 208 78.4
SGA_v2.0_scaffold191G40453 Striga asiatica HOM05D006451 ORTHO05D007680 3.1e-93 345.5 209 79.9
AUR62043956 Chenopodium quinoa HOM05D006451 ORTHO05D007680 4.0e-93 345.1 227 71.8
AL1G13790 Arabidopsis lyrata HOM05D006451 ORTHO05D007680 5.3e-93 344.7 208 77.4
Carub.0001s0338 Capsella rubella HOM05D006451 ORTHO05D007680 9.0e-93 344.0 208 77.9
Peaxi162Scf00520g00039 Petunia axillaris HOM05D006451 ORTHO05D007680 2.0e-92 342.8 209 79.9
Nitab4.5_0003249g0030 Nicotiana tabacum HOM05D006451 ORTHO05D007680 2.6e-92 342.4 208 80.3
AT1G04190 Arabidopsis thaliana HOM05D006451 ORTHO05D007680 1.0e-91 340.5 208 76.9
Thhalv10008141m.g Eutrema salsugineum HOM05D006451 ORTHO05D007680 1.0e-91 340.5 211 76.3
FAN22G0671 Fragaria x ananassa HOM05D006451 ORTHO05D007680 1.0e-91 340.5 259 66.8
Aa31LG1G20650 Aethionema arabicum HOM05D006451 ORTHO05D007680 1.7e-91 339.7 207 77.3
CARHR003520 Cardamine hirsuta HOM05D006451 ORTHO05D007680 6.4e-91 337.8 208 76.0
CDE10G0543 Ceratophyllum demersum HOM05D006451 ORTHO05D007680 6.4e-91 337.8 227 70.5
Os12g0604800 Oryza sativa ssp. japonica HOM05D006451 ORTHO05D007680 6.4e-91 337.8 227 70.0
Zm00001eb031280 Zea mays HOM05D006451 ORTHO05D007680 2.5e-90 335.9 227 69.6
Haze_11218 Corylus avellana HOM05D006451 ORTHO05D007680 7.1e-90 334.3 232 72.8
CDE10G0598 Ceratophyllum demersum HOM05D006451 ORTHO05D007680 1.0e-88 330.5 227 70.0
EL10Ac3g06461 Beta vulgaris HOM05D006451 ORTHO05D007680 1.3e-88 330.1 300 57.0
HPP92_001912 Vanilla planifolia HOM05D006451 ORTHO05D007680 1.5e-87 326.6 229 69.0
ATR0665G102 Amborella trichopoda HOM05D006451 ORTHO05D007680 1.6e-86 323.2 228 68.0
Ah.07g204140 Amaranthus hybridus HOM05D006451 ORTHO05D007680 4.0e-85 318.5 227 67.0
Migut.G00375 Erythranthe guttata HOM05D006451 ORTHO05D007680 4.0e-85 318.5 211 73.0
FAN17G1940 Fragaria x ananassa HOM05D006451 ORTHO05D007680 1.0e-83 313.9 229 69.0
unitig_899.g14873 Utricularia gibba HOM05D006451 ORTHO05D007680 2.5e-79 299.3 234 64.1
Nn6g34139 Nelumbo nucifera HOM05D006451 ORTHO05D007680 5.7e-79 298.1 163 84.0
arahy.Tifrunner.gnm1.ann1.9LTU7I Arachis hypogaea HOM05D006451 ORTHO05D007680 1.6e-78 296.6 161 83.2
arahy.Tifrunner.gnm1.ann1.D3KIH0 Arachis hypogaea HOM05D006451 ORTHO05D007680 1.6e-78 296.6 161 83.2
DCAR_027237 Daucus carota HOM05D006451 ORTHO05D007680 1.0e-64 250.8 167 74.3
SalBow2G3248 Salvia bowleyana HOM05D006451 ORTHO05D007680 1.4e-64 250.4 143 76.2
FAN12G3362 Fragaria x ananassa HOM05D006451 ORTHO05D007680 3.7e-62 242.3 166 74.1
TPR.G25159 Trifolium pratense HOM05D006451 ORTHO05D007680 5.3e-61 238.4 148 79.1
SMO348G0048 Selaginella moellendorffii HOM05D006451 ORTHO05D007680 3.1e-53 212.6 230 48.3
Mapoly0182s0013 Marchantia polymorpha HOM05D006451 ORTHO05D007680 1.2e-49 200.7 229 45.4
AagrBONN_evm.TU.Sc2ySwM_362.195 Anthoceros agrestis HOM05D006451 ORTHO05D007680 1.4e-48 197.2 211 47.4
Haze_11222 Corylus avellana HOM05D006451 ORTHO05D007680 6.3e-46 188.3 266 47.0
CBR_g18988 Chara braunii HOM05D006451 ORTHO05D007680 2.3e-35 153.3 231 37.2
FAN12G0848 Fragaria x ananassa HOM05D006451 ORTHO05D007680 3.5e-28 129.4 69 79.7
Pp3c17_1530 Physcomitrium patens HOM05D006451 ORTHO05D007680 8.9e-24 114.8 172 41.9
arahy.Tifrunner.gnm1.ann1.1SA9RR Arachis hypogaea HOM05D006451 ORTHO05D007680 4.6e-20 102.4 71 73.2
arahy.Tifrunner.gnm1.ann1.45YQSM Arachis hypogaea HOM05D006451 ORTHO05D007680 2.9e-14 83.2 61 70.5
arahy.Tifrunner.gnm1.ann1.Q3A75N Arachis hypogaea HOM05D006451 ORTHO05D007680 2.9e-14 83.2 61 70.5
vmacro13396 Vaccinium macrocarpon HOM05D006451 ORTHO05D007680 4.3e-10 69.3 49 71.4
unitig_736.g22460 Utricularia gibba HOM05D006451 ORTHO05D007680 3.7e-06 56.2 47 57.4


User provided reference genes

Program Settings