Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44434 Davidia involucrata HOM05D007701 ORTHO05D006440 5.5e-63 244.2 130 100.0
Dinv38332 Davidia involucrata HOM05D007701 ORTHO05D006440 1.4e-34 149.8 121 76.0
Haze_01050 Corylus avellana HOM05D007701 ORTHO05D006440 5.6e-23 111.3 120 61.7
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 2.1e-22 109.4 127 60.6
Cfa015502 Carpinus fangiana HOM05D007701 ORTHO05D006440 3.1e-21 105.5 120 60.8
Duzib151G0788 Durio zibethinus HOM05D007701 ORTHO05D006440 8.9e-21 104.0 124 59.7
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 1.3e-19 100.1 123 54.5
QL12p038321 Quercus lobata HOM05D007701 ORTHO05D006440 4.2e-18 95.1 121 57.0
Thecc.04G276200 Theobroma cacao HOM05D007701 ORTHO05D006440 7.1e-18 94.4 124 54.8
Glyma.15G098700 Glycine max HOM05D007701 ORTHO05D006440 2.7e-17 92.4 135 48.1
Phvul.006G160600 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 3.5e-17 92.0 102 58.8
CiPaw.01G153900 Carya illinoinensis HOM05D007701 ORTHO05D006440 6.0e-17 91.3 121 53.7
Duzib212G0358 Durio zibethinus HOM05D007701 ORTHO05D006440 1.3e-16 90.1 120 52.5
CiPaw.02G087100 Carya illinoinensis HOM05D007701 ORTHO05D006440 2.3e-16 89.4 121 54.5
Glyma.13G214500 Glycine max HOM05D007701 ORTHO05D006440 3.9e-16 88.6 137 46.7
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 8.7e-16 87.4 124 54.0
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 5.6e-15 84.7 114 53.5
QL06p007247 Quercus lobata HOM05D007701 ORTHO05D006440 5.6e-15 84.7 113 52.2
Ca_00580_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 7.3e-15 84.3 125 46.4
Medtr2g020370 Medicago truncatula HOM05D007701 ORTHO05D006440 1.6e-14 83.2 123 47.2
COL.COLO4_13938 Corchorus olitorius HOM05D007701 ORTHO05D006440 2.1e-14 82.8 117 53.8
TWI09G0131 Tripterygium wilfordii HOM05D007701 ORTHO05D006440 2.1e-14 82.8 104 53.8
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 2.8e-14 82.4 122 51.6
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 2.8e-14 82.4 119 52.9
Prupe.8G252700 Prunus persica HOM05D007701 ORTHO05D006440 1.8e-13 79.7 122 54.1
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 5.3e-13 78.2 122 48.4
Lalb_Chr15g0087071 Lupinus albus HOM05D007701 ORTHO05D006440 6.9e-13 77.8 106 55.7
Gohir.A11G118000 Gossypium hirsutum HOM05D007701 ORTHO05D006440 1.2e-12 77.0 118 50.8
TPR.G1519 Trifolium pratense HOM05D007701 ORTHO05D006440 1.5e-12 76.6 104 51.0
Oeu021618.1 Olea europaea HOM05D007701 ORTHO05D006440 2.0e-12 76.3 112 53.6
Gohir.D11G122900 Gossypium hirsutum HOM05D007701 ORTHO05D006440 4.4e-12 75.1 120 50.8
Gorai.007G131800 Gossypium raimondii HOM05D007701 ORTHO05D006440 4.4e-12 75.1 120 50.8
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 5.8e-12 74.7 117 48.7
CANSAT25G3325 Cannabis sativa HOM05D007701 ORTHO05D006440 7.6e-12 74.3 107 54.2
Duzib138G0471 Durio zibethinus HOM05D007701 ORTHO05D006440 7.6e-12 74.3 122 49.2
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 9.9e-12 73.9 111 54.1
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 9.9e-12 73.9 133 46.6
Thecc.01G290700 Theobroma cacao HOM05D007701 ORTHO05D006440 1.3e-11 73.6 119 47.9
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 2.2e-11 72.8 116 47.4
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 2.2e-11 72.8 124 47.6
Gohir.A08G072500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 2.9e-11 72.4 121 47.1
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 6.4e-11 71.2 111 53.2
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 6.4e-11 71.2 110 52.7
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 1.9e-10 69.7 120 50.0
Potri.008G195700 Populus trichocarpa HOM05D007701 ORTHO05D006440 4.2e-10 68.6 113 49.6
Migut.G00219 Erythranthe guttata HOM05D007701 ORTHO05D006440 7.1e-10 67.8 123 46.3
Gohir.D08G080500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 7.1e-10 67.8 121 45.5
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 7.1e-10 67.8 103 52.4
Nitab4.5_0000232g0150 Nicotiana tabacum HOM05D020366 ORTHO05D006440 9.3e-10 67.4 119 44.5
LjContig00389g0004887 Lotus japonicus HOM05D007701 ORTHO05D006440 1.6e-09 66.6 118 46.6
Lalb_Chr20g0118191 Lupinus albus HOM05D007701 ORTHO05D006440 1.6e-09 66.6 86 55.8
Peaxi162Scf00041g01724 Petunia axillaris HOM05D020366 ORTHO05D006440 1.6e-09 66.6 101 51.5
Potri.010G031700 Populus trichocarpa HOM05D007701 ORTHO05D006440 1.6e-09 66.6 116 49.1
RcHm_v2.0_Chr4g0420861 Rosa chinensis HOM05D016333 ORTHO05D006440 2.1e-09 66.2 122 45.1
Medtr1g088970 Medicago truncatula HOM05D007701 ORTHO05D006440 2.7e-09 65.9 93 52.7
Prupe.1G143000 Prunus persica HOM05D016333 ORTHO05D006440 2.7e-09 65.9 130 46.2
COL.COLO4_08025 Corchorus olitorius HOM05D007701 ORTHO05D006440 4.6e-09 65.1 113 46.0
Gorai.004G085600 Gossypium raimondii HOM05D007701 ORTHO05D006440 6.0e-09 64.7 73 57.5
Nitab4.5_0003631g0050 Nicotiana tabacum HOM05D020366 ORTHO05D006440 7.8e-09 64.3 101 50.5
Psat1g187000 Pisum sativum HOM05D007701 ORTHO05D006440 1.3e-08 63.5 125 41.6
SalBow2G1499 Salvia bowleyana HOM05D007701 ORTHO05D006440 1.7e-08 63.2 101 51.5
CDE05G2550 Ceratophyllum demersum HOM05D007701 ORTHO05D006440 3.0e-08 62.4 90 53.3
Eucgr.K03437 Eucalyptus grandis HOM05D007701 ORTHO05D006440 3.9e-08 62.0 111 47.7
Sopen11g019180 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-08 61.6 103 47.6
Migut.D00227 Erythranthe guttata HOM05D007701 ORTHO05D006440 1.5e-07 60.1 115 47.0
CAN.G101.7 Capsicum annuum HOM05D020366 ORTHO05D006440 4.3e-07 58.5 116 47.4
FvH4_4g17060 Fragaria vesca HOM05D016333 ORTHO05D006440 4.3e-07 58.5 109 45.0
FAN07G1026 Fragaria x ananassa HOM05D016333 ORTHO05D006440 4.3e-07 58.5 109 45.0
FAN12G2150 Fragaria x ananassa HOM05D016333 ORTHO05D006440 4.3e-07 58.5 109 45.0
FAN12G2470 Fragaria x ananassa HOM05D016333 ORTHO05D006440 4.3e-07 58.5 109 45.0
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 5.6e-07 58.2 101 45.5
Sopen00g012820 Solanum pennellii HOM05D020366 ORTHO05D006440 5.6e-07 58.2 111 45.9
CiPaw.08G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 7.3e-07 57.8 98 45.9
Ca_10375_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 7.3e-07 57.8 92 50.0
Solyc04g074167.1 Solanum lycopersicum HOM05D020366 ORTHO05D006440 7.3e-07 57.8 117 46.2
AL39U10120 Arabidopsis lyrata HOM05D011411 ORTHO05D006440 2.8e-06 55.8 123 48.8
AL4G47520 Arabidopsis lyrata HOM05D011411 ORTHO05D006440 2.8e-06 55.8 123 48.8
Carub.0004s3065 Capsella rubella HOM05D011411 ORTHO05D006440 8.1e-06 54.3 110 48.2


User provided reference genes

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