Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 2.5e-209 731.9 365 100.0
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 3.5e-139 498.8 350 75.7
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.5e-105 387.1 347 60.8
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.0e-98 364.4 349 59.9
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.6e-96 357.1 357 59.7
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.0e-94 350.1 348 58.0
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 7.9e-91 338.2 343 54.5
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 1.9e-89 333.6 348 55.2
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 9.7e-89 331.3 354 53.4
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 2.3e-82 310.1 345 51.6
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.8e-79 300.4 357 51.0
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 2.9e-77 293.1 339 50.4
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 3.2e-76 289.7 348 49.7
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 4.7e-75 285.8 344 48.0
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.6e-73 280.0 356 46.3
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 3.3e-73 279.6 345 49.0
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 6.3e-72 275.4 359 49.0
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.1e-71 274.6 381 46.2
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 5.9e-70 268.9 339 48.1
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.2e-69 266.9 345 47.0
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.5e-68 264.2 345 46.7
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.4e-65 252.7 352 47.4
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.3e-64 251.1 382 45.0
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.8e-64 250.0 386 43.0
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 3.7e-64 249.6 348 45.7
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 4.8e-64 249.2 344 44.2
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 8.5e-61 238.4 291 48.8
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 9.4e-60 235.0 339 46.0
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.2e-59 234.6 345 44.6
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.4e-57 226.5 252 54.8
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.3e-56 224.6 348 42.5
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.4e-55 220.3 347 42.9
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.4e-55 220.3 339 44.0
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 5.4e-55 219.2 357 42.6
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.6e-54 217.6 346 42.5
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.3e-53 214.5 339 43.1
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-53 214.5 339 43.1
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-53 214.5 339 43.1
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.7e-53 214.2 347 41.2
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 2.2e-53 213.8 353 43.3
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 8.5e-53 211.8 354 39.0
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 2.5e-52 210.3 350 42.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 3.6e-51 206.5 342 40.9
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 3.6e-51 206.5 359 39.8
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 4.7e-51 206.1 342 40.9
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.0e-50 204.9 341 41.1
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 5.2e-50 202.6 281 44.8
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.0e-49 200.7 343 40.8
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 4.4e-49 199.5 379 38.5
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 5.7e-49 199.1 365 38.9
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 5.7e-49 199.1 349 39.3
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.7e-48 197.6 342 39.2
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 1.6e-46 191.0 369 38.2
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.5e-46 189.9 338 39.6
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 2.3e-45 187.2 359 37.0
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.5e-44 183.7 399 36.1
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 7.3e-44 182.2 268 42.5
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 7.3e-44 182.2 282 42.6
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 9.5e-44 181.8 378 34.7
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 1.0e-42 178.3 238 46.6
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 5.7e-41 172.6 349 37.0
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.8e-39 167.5 340 36.5
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.6e-38 164.5 166 58.4
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 4.6e-38 162.9 229 45.4
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 2.3e-37 160.6 338 35.5
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.3e-37 160.6 338 36.7
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 6.6e-37 159.1 318 38.1
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 3.3e-36 156.8 417 31.7
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 1.5e-33 147.9 136 58.8
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 3.2e-31 140.2 157 52.2
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 4.1e-31 139.8 164 43.9
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.3e-29 134.0 268 36.2
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 8.6e-29 132.1 335 33.4
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 7.3e-28 129.0 318 33.0
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 6.2e-27 125.9 344 33.4
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 5.2e-26 122.9 327 33.9
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 7.1e-23 112.5 120 55.8
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.1e-18 98.6 285 28.4
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 2.0e-17 94.4 101 53.5
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 6.4e-16 89.4 320 31.9
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 1.1e-15 88.6 357 27.2
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 5.4e-15 86.3 297 28.6
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.0e-13 82.0 60 65.0
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 2.3e-13 80.9 235 30.6
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 5.1e-13 79.7 81 56.8
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 4.7e-11 73.2 82 43.9
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 1.4e-10 71.6 156 32.7
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 1.5e-09 68.2 219 26.9
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 2.2e-08 64.3 97 40.2


User provided reference genes

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