Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 3.7e-185 651.4 316 100.0
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 9.4e-157 557.0 313 87.5
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 1.2e-130 470.3 316 75.3
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 1.7e-129 466.5 317 72.9
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 5.4e-128 461.5 317 72.6
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 3.9e-118 428.7 323 68.7
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 6.6e-118 427.9 318 69.2
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 1.5e-114 416.8 318 67.3
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 3.7e-113 412.1 318 66.4
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 1.1e-112 410.6 317 64.0
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 1.4e-112 410.2 316 64.6
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.4e-112 409.5 318 67.6
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 3.0e-110 402.5 313 66.1
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 1.1e-109 400.6 330 64.2
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 4.3e-109 398.7 401 56.4
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 9.5e-109 397.5 309 65.4
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.2e-108 397.1 309 66.0
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.2e-108 397.1 318 63.5
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 2.3e-107 392.9 309 65.0
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 3.1e-107 392.5 223 83.4
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 4.4e-106 388.7 315 64.1
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 2.9e-105 386.0 313 62.9
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 4.1e-104 382.1 313 60.7
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 9.2e-104 380.9 335 60.3
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 9.2e-104 380.9 313 62.9
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.2e-103 380.6 318 60.4
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.3e-102 377.1 315 62.9
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 1.7e-102 376.7 233 73.8
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 3.0e-102 375.9 230 78.7
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.9e-102 375.6 314 61.5
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 3.9e-102 375.6 303 61.4
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 6.6e-102 374.8 226 75.7
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.5e-101 373.6 314 61.5
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 1.5e-101 373.6 303 61.7
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.9e-101 373.2 302 64.9
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 2.5e-101 372.9 289 64.0
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 3.3e-101 372.5 244 71.3
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 3.6e-100 369.0 313 58.8
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.6e-100 369.0 323 58.8
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 4.7e-100 368.6 256 69.9
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 6.2e-100 368.2 281 65.1
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 1.8e-99 366.7 313 59.4
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 2.3e-99 366.3 226 74.8
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 3.1e-99 365.9 226 74.8
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 5.2e-99 365.2 313 61.0
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 8.9e-99 364.4 256 67.6
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 8.9e-99 364.4 313 58.1
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 1.5e-98 363.6 229 74.7
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 2.0e-98 363.2 280 63.6
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.4e-98 362.5 314 60.8
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 4.4e-98 362.1 380 55.0
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 9.9e-98 360.9 316 59.8
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 1.3e-97 360.5 269 63.6
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 1.7e-97 360.1 315 57.5
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 1.7e-97 360.1 223 74.4
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 2.2e-97 359.8 321 58.3
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 2.4e-96 356.3 225 71.1
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 4.1e-96 355.5 313 56.2
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 4.1e-96 355.5 313 58.5
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 5.4e-96 355.1 316 58.9
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 5.4e-96 355.1 317 58.0
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 9.2e-96 354.4 225 72.0
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 9.2e-96 354.4 210 77.1
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 1.2e-95 354.0 230 72.6
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.7e-94 350.1 313 55.6
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 3.0e-94 349.4 316 54.1
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 3.0e-94 349.4 226 70.8
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.6e-94 347.8 246 68.3
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 7.3e-93 344.7 327 58.1
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 1.6e-92 343.6 313 55.0
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 1.6e-92 343.6 313 55.0
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 1.6e-92 343.6 239 65.3
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 2.1e-92 343.2 316 53.5
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.1e-91 340.9 240 65.0
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.4e-91 339.7 316 52.8
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 4.0e-91 339.0 231 65.4
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 1.5e-90 337.0 313 55.3
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 2.0e-90 336.7 231 68.4
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.6e-90 336.3 315 53.7
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 3.4e-90 335.9 313 53.7
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 1.3e-89 334.0 322 54.3
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 2.9e-89 332.8 240 63.3
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 3.8e-89 332.4 272 60.7
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 1.1e-88 330.9 318 54.4
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.9e-88 330.1 321 53.9
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 4.2e-88 328.9 292 58.2
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.2e-87 327.4 313 53.4
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 2.1e-87 326.6 271 59.0
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 4.6e-87 325.5 230 66.1
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 6.0e-87 325.1 230 65.2
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 1.3e-86 323.9 264 62.5
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.7e-86 323.6 231 63.2
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 3.0e-86 322.8 314 52.9
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 1.1e-85 320.9 287 58.5
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 1.5e-85 320.5 313 52.7
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.9e-85 320.1 248 60.9
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 2.5e-85 319.7 313 53.4
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 3.3e-85 319.3 272 58.8
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.6e-84 317.0 209 69.9
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 1.4e-83 313.9 314 52.9
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.4e-83 313.9 318 52.8
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.4e-83 313.9 313 52.7
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 1.5e-82 310.5 289 56.4
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 1.4e-80 303.9 236 58.9
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 2.1e-79 300.1 260 59.6
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 7.8e-79 298.1 233 60.9
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 2.3e-78 296.6 212 65.1
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 1.1e-77 294.3 223 60.1
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.3e-75 285.4 205 63.9
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 6.4e-73 278.5 332 49.7
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 3.2e-72 276.2 217 59.9
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 4.8e-68 262.3 336 43.5
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 3.0e-62 243.0 292 49.7
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 1.3e-57 227.6 236 50.8
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 3.2e-48 196.4 247 47.0
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 2.3e-46 190.3 225 44.9
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.7e-45 185.7 133 66.2
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 2.3e-38 163.7 195 46.2
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 2.7e-31 140.2 92 65.2
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 5.2e-30 136.0 76 80.3
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 6.3e-28 129.0 215 32.6
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 2.0e-26 124.0 227 29.1
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 1.0e-25 121.7 92 56.5
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 8.5e-25 118.6 150 39.3
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.1e-23 114.0 68 73.5
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 2.7e-23 113.6 232 34.5
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 6.8e-22 109.0 155 46.5
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 1.9e-16 90.9 126 35.7
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 1.9e-16 90.9 214 27.6
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 3.6e-15 86.7 245 24.1
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.1e-08 65.1 134 29.9
Eucgr.H03758 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.6e-07 61.2 40 62.5
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 1.0e-06 58.5 59 54.2


User provided reference genes

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