Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 2.3e-76 288.9 150 100.0
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.6e-72 275.4 149 96.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.2e-64 250.0 149 85.9
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.1e-62 243.4 149 83.9
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.4e-62 242.3 149 82.6
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.4e-62 242.3 149 81.9
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.4e-62 242.3 148 82.4
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.1e-62 241.5 149 83.2
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 5.4e-62 241.1 149 81.2
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 5.4e-62 241.1 149 81.9
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.2e-62 240.4 149 81.9
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 9.2e-62 240.4 149 81.2
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.7e-61 238.8 149 79.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.7e-61 238.8 148 83.1
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.7e-61 238.8 148 83.1
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.5e-61 238.4 148 82.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 6.0e-61 237.7 149 83.2
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.0e-60 236.9 149 83.2
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.0e-60 236.9 149 81.9
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.3e-60 236.5 149 79.9
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.3e-60 236.5 149 81.2
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.3e-60 236.5 148 81.1
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.3e-60 236.5 149 80.5
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.0e-60 235.3 149 79.2
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 3.9e-60 235.0 149 79.2
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.5e-59 232.3 149 77.2
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 4.3e-59 231.5 149 76.5
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.2e-58 229.9 148 76.4
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.6e-58 229.6 149 78.5
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.6e-58 229.6 149 75.8
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.8e-58 228.8 149 75.8
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.8e-58 228.8 149 75.2
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.8e-58 228.8 148 75.7
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 8.1e-58 227.3 149 76.5
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.1e-57 226.9 148 78.4
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.8e-57 226.1 149 77.9
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 2.4e-57 225.7 149 77.2
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.4e-57 225.7 149 75.8
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 2.4e-57 225.7 149 75.2
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.1e-57 225.3 149 74.5
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.2e-56 223.4 149 75.8
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.5e-56 223.0 149 75.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.0e-56 222.6 149 77.2
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 2.0e-56 222.6 149 78.5
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 3.4e-56 221.9 150 75.3
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 7.6e-56 220.7 148 78.4
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 9.9e-56 220.3 150 74.7
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.9e-55 218.8 150 74.0
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.9e-55 218.8 149 72.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 4.9e-55 218.0 142 74.6
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 4.9e-55 218.0 151 72.2
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 6.4e-55 217.6 149 74.5
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.4e-54 216.5 148 74.3
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.4e-54 216.5 150 74.0
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.4e-54 216.5 150 74.0
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 2.4e-54 215.7 139 79.9
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.2e-54 215.3 151 72.2
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 3.2e-54 215.3 148 75.0
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 4.1e-54 214.9 149 73.8
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 9.2e-54 213.8 206 59.7
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.6e-53 213.0 149 75.2
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 2.7e-53 212.2 148 75.0
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 3.5e-53 211.8 149 72.5
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 7.8e-53 210.7 147 75.5
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 7.8e-53 210.7 148 74.3
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 7.8e-53 210.7 148 74.3
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.3e-52 209.9 149 71.1
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.7e-52 209.5 148 71.6
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.3e-52 209.1 149 72.5
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 5.1e-52 208.0 149 71.8
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 8.6e-52 207.2 153 72.5
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 8.6e-52 207.2 149 73.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 8.6e-52 207.2 133 78.9
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.1e-51 206.8 153 71.9
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.1e-51 206.8 149 72.5
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.5e-51 206.5 134 78.4
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.5e-51 206.5 151 72.2
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.3e-51 205.3 149 73.8
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 5.6e-51 204.5 149 73.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 9.6e-51 203.8 150 72.7
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.2e-50 203.4 149 69.8
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.1e-49 200.3 150 71.3
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 2.4e-49 199.1 150 66.7
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 9.0e-49 197.2 150 68.7
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.2e-48 196.8 172 63.4
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.0e-48 196.1 152 66.4
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 3.4e-48 195.3 149 65.1
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 4.4e-48 194.9 149 69.8
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 7.6e-48 194.1 149 66.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.7e-47 193.0 155 65.8
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 3.8e-47 191.8 149 63.8
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.9e-46 189.5 151 67.5
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 3.2e-46 188.7 151 67.5
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.4e-46 188.0 150 66.0
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 7.1e-46 187.6 151 66.2
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 9.3e-46 187.2 149 61.7
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.3e-44 183.3 149 62.4
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 7.3e-43 177.6 152 60.5
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.1e-42 174.1 148 64.2
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.1e-41 173.7 148 64.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.1e-41 172.2 149 63.8
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.1e-41 172.2 125 70.4
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-39 166.0 110 73.6
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 4.9e-39 164.9 149 61.1
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 4.2e-38 161.8 118 70.3
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 3.5e-37 158.7 148 56.1
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.0e-36 157.1 118 66.9
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.3e-36 156.0 150 55.3
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.4e-33 146.7 272 37.1
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 3.8e-31 138.7 129 58.9
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 7.9e-29 131.0 106 57.5
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.6e-21 106.7 102 58.8
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 3.6e-13 79.0 108 45.4
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.1e-11 73.9 90 52.2
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 5.7e-11 71.6 102 47.1
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 5.3e-09 65.1 149 35.6
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.3e-07 60.5 47 70.2


User provided reference genes

Program Settings