Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 2.7e-45 185.7 151 100.0
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.5e-30 136.0 151 78.8
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.5e-30 136.0 151 78.8
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.0e-28 130.6 151 78.1
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.0e-28 130.6 151 78.1
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 3.0e-28 129.0 151 82.1
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 6.7e-28 127.9 151 83.4
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 2.0e-24 116.3 130 83.8
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 1.0e-23 114.0 153 50.3
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.6e-21 106.7 151 71.5
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.4e-20 103.6 129 84.5
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 2.3e-20 102.8 151 65.6
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 6.7e-20 101.3 151 70.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 6.7e-20 101.3 153 46.4
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.1e-19 100.5 133 78.2
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 3.3e-19 99.0 155 67.1
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 5.7e-19 98.2 148 70.3
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 5.7e-19 98.2 152 71.1
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.4e-19 97.8 148 70.3
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 2.8e-18 95.9 152 67.8
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 4.8e-18 95.1 151 66.9
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 4.8e-18 95.1 152 64.5
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.8e-18 95.1 140 72.9
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 1.1e-17 94.0 149 71.1
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.4e-17 93.6 115 82.6
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.4e-17 92.8 148 69.6
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 2.4e-17 92.8 151 70.9
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 9.1e-17 90.9 155 45.8
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.2e-16 90.5 154 69.5
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.2e-16 90.5 157 69.4
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.6e-16 90.1 151 70.2
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.6e-16 90.1 135 65.9
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 2.0e-16 89.7 144 70.8
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 2.6e-16 89.4 136 64.7
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 2.6e-16 89.4 148 63.5
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 2.6e-16 89.4 152 65.1
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 3.5e-16 89.0 151 67.5
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 7.7e-16 87.8 133 72.9
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 7.7e-16 87.8 152 67.1
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 1.0e-15 87.4 151 69.5
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.3e-15 87.0 143 72.0
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.2e-15 86.3 154 68.8
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.2e-15 86.3 150 66.0
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 3.8e-15 85.5 144 60.4
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 8.5e-15 84.3 146 62.3
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.1e-14 84.0 127 76.4
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.9e-14 83.2 112 75.9
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 3.2e-14 82.4 112 73.2
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 5.5e-14 81.6 144 68.8
Nitab4.5_0000960g0100 Nicotiana tabacum HOM05D006719 ORTHO05D007063 1.2e-13 80.5 152 68.4
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.2e-13 80.5 138 71.7
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 2.7e-13 79.3 144 67.4
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 3.6e-13 79.0 151 67.5
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 8.0e-13 77.8 150 67.3
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.4e-12 77.0 149 64.4
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 1.8e-12 76.6 139 70.5
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.8e-12 76.6 135 59.3
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 5.2e-12 75.1 131 70.2
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 8.8e-12 74.3 136 71.3
CAN.G129.20 Capsicum annuum HOM05D006719 ORTHO05D007063 1.2e-11 73.9 138 66.7
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 2.0e-11 73.2 154 66.2
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.6e-11 72.8 161 40.4
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 2.6e-11 72.8 126 74.6
Nitab4.5_0005076g0040 Nicotiana tabacum HOM05D006719 ORTHO05D007063 3.3e-11 72.4 151 66.9
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 4.4e-11 72.0 160 63.1
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.7e-11 71.6 154 64.3
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.7e-10 70.1 148 62.2
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 6.3e-10 68.2 148 62.2
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 6.3e-10 68.2 148 64.9
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 1.4e-09 67.0 138 50.0
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-09 66.6 135 68.9
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 2.4e-09 66.2 110 67.3
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 2.4e-09 66.2 151 60.9
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 2.4e-09 66.2 137 54.7
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 5.3e-09 65.1 148 59.5
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.3e-09 65.1 157 38.2
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 7.0e-09 64.7 149 65.1
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 1.6e-08 63.5 133 67.7
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.0e-08 63.2 139 61.9
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 2.7e-08 62.8 119 61.3
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 2.7e-08 62.8 138 65.2
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 2.7e-08 62.8 41 73.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 2.7e-08 62.8 150 65.3
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.7e-08 62.8 150 62.7
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 3.5e-08 62.4 133 63.2
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.2e-07 59.7 165 54.5
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 2.2e-07 59.7 149 50.3
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.9e-07 59.3 180 45.6
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.9e-07 59.3 153 62.7
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 2.9e-07 59.3 110 67.3
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 3.8e-07 58.9 148 62.8
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 5.0e-07 58.5 148 60.8
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 6.5e-07 58.2 119 35.3
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 6.5e-07 58.2 119 35.3
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 6.5e-07 58.2 130 66.9
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 1.1e-06 57.4 51 58.8
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 1.5e-06 57.0 156 59.6
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 1.5e-06 57.0 149 62.4
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 2.5e-06 56.2 54 55.6
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 2.5e-06 56.2 154 63.6
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 2.5e-06 56.2 140 63.6
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 5.5e-06 55.1 156 60.3


User provided reference genes

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