Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.3e-116 422.9 198 100.0
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 6.7e-68 261.2 170 73.5
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 5.9e-56 221.5 162 63.6
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.6e-53 213.4 167 58.1
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.6e-53 211.8 166 56.0
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.0e-52 209.1 163 58.3
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.5e-51 206.8 174 57.5
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 5.9e-48 194.9 168 53.6
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 1.0e-47 194.1 167 55.7
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 5.0e-47 191.8 164 55.5
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-46 190.7 167 53.3
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.5e-46 189.5 166 52.4
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 1.2e-45 187.2 167 51.5
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-45 186.8 167 52.1
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 2.1e-45 186.4 165 52.1
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-45 186.4 166 53.6
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.6e-45 185.3 167 53.3
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.1e-45 184.9 169 50.3
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 6.1e-45 184.9 167 53.3
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.9e-45 184.5 167 52.7
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.4e-44 183.7 153 57.5
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.0e-44 182.6 167 50.9
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 6.7e-44 181.4 168 51.8
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 8.8e-44 181.0 170 52.9
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 8.8e-44 181.0 158 55.1
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-43 180.6 167 50.3
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.3e-43 179.1 167 46.1
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-42 177.2 166 50.6
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-42 176.4 167 48.5
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-41 174.1 167 49.1
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.4e-41 173.7 167 49.1
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-38 164.1 163 49.7
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.2e-38 162.5 170 41.8
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 9.4e-38 161.0 167 41.9
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-37 160.2 165 45.5
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-37 158.3 142 52.8
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.8e-36 156.8 133 47.4
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 2.0e-35 153.3 160 46.2
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 3.1e-33 146.0 140 49.3
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.2e-30 136.0 122 50.8
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-29 133.3 135 46.7
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.6e-29 132.5 128 47.7
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.0e-28 131.0 159 44.7
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.3e-28 129.8 132 46.2
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 8.2e-26 121.3 167 38.3
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.1e-25 119.0 108 52.8
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 4.5e-24 115.5 152 43.4
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.7e-24 114.8 114 45.6
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 6.5e-23 111.7 164 35.4
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 9.4e-22 107.8 175 38.3
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-21 107.5 114 43.9
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 2.7e-21 106.3 92 52.2
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 1.2e-19 100.9 149 36.2
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.2e-19 100.9 142 42.3
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 2.0e-19 100.1 134 46.3
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 5.7e-19 98.6 90 52.2
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 2.8e-18 96.3 199 29.6
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 4.8e-18 95.5 70 54.3
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-17 93.6 145 35.2
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.1e-17 92.8 165 32.7
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.2e-16 90.9 142 39.4
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-15 87.8 185 30.3
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.5e-14 84.0 111 37.8
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.7e-13 79.7 128 37.5
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 3.6e-13 79.3 158 34.8
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 2.3e-12 76.6 157 27.4
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 3.4e-11 72.8 145 29.0
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.4e-11 72.4 116 35.3
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.5e-11 71.6 63 52.4
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 4.9e-10 68.9 65 47.7
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.1e-09 66.2 93 32.3
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 2.7e-08 63.2 171 28.1
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 3.5e-08 62.8 160 25.0
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 7.7e-08 61.6 188 28.2
Eucgr.E02013 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.0e-07 58.9 118 33.9
Cfa011927 Carpinus fangiana HOM05D001713 ORTHO05D001669 8.6e-07 58.2 118 33.1
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 2.5e-06 56.6 155 25.8
Haze_09172 Corylus avellana HOM05D001713 ORTHO05D001669 4.3e-06 55.8 118 32.2
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.3e-06 55.1 79 35.4
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 9.5e-06 54.7 40 57.5


User provided reference genes

Program Settings