Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.7e-61 238.0 121 100.0
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 2.5e-57 225.3 121 93.4
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 2.0e-51 205.7 121 85.1
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.0e-50 203.4 121 78.5
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 2.5e-49 198.7 121 81.8
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.2e-48 196.4 121 78.5
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 2.1e-48 195.7 121 78.5
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 8.0e-48 193.7 119 79.8
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.8e-47 192.6 121 77.7
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 3.0e-47 191.8 119 79.0
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 4.0e-47 191.4 121 78.5
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.2e-47 191.0 121 79.3
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 8.8e-47 190.3 121 76.9
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.2e-46 189.9 121 79.3
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.5e-46 189.5 114 79.8
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.5e-46 189.5 121 79.3
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 3.4e-46 188.3 121 78.5
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.4e-46 188.3 121 79.3
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.4e-46 188.0 121 79.3
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.4e-46 188.0 121 79.3
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 5.7e-46 187.6 121 76.9
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 7.5e-46 187.2 121 78.5
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 9.8e-46 186.8 121 76.0
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 9.8e-46 186.8 121 78.5
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 76.9
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 73.6
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 76.0
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 75.2
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 2.2e-45 185.7 121 78.5
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.2e-45 185.7 121 76.9
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 2.2e-45 185.7 114 79.8
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.2e-45 185.7 121 77.7
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 3.7e-45 184.9 121 75.2
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 3.7e-45 184.9 121 79.3
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 4.8e-45 184.5 121 73.6
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 8.3e-45 183.7 114 78.9
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.1e-44 183.3 121 76.0
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 1.1e-44 183.3 121 73.6
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 1.8e-44 182.6 121 77.7
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 2.4e-44 182.2 114 78.9
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.4e-44 182.2 121 72.7
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 3.1e-44 181.8 121 72.7
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 4.1e-44 181.4 114 78.1
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 4.1e-44 181.4 121 76.9
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 4.1e-44 181.4 116 76.7
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.4e-44 181.0 121 75.2
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 7.0e-44 180.6 121 72.7
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 7.0e-44 180.6 121 72.7
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 9.1e-44 180.3 116 75.9
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 3.5e-43 178.3 121 74.4
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 3.5e-43 178.3 121 72.7
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 5.9e-43 177.6 121 76.9
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 5.9e-43 177.6 114 75.4
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.0e-42 176.8 121 74.4
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.7e-42 176.0 104 83.7
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 6.5e-42 174.1 146 65.8
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 6.5e-42 174.1 114 77.2
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 6.5e-42 174.1 121 71.1
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 8.5e-42 173.7 121 73.6
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 71.1
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 72.7
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.5e-41 172.9 114 74.6
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.5e-41 172.9 113 75.2
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.9e-41 172.6 101 82.2
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.9e-41 172.6 111 79.3
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.2e-40 169.9 108 74.1
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.2e-40 169.9 121 68.6
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.6e-40 169.5 114 72.8
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.6e-40 169.5 112 74.1
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 73.2
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 2.8e-40 168.7 104 81.7
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.8e-40 168.7 114 72.8
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 4.7e-40 167.9 114 71.9
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 6.1e-40 167.5 112 72.3
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 8.0e-40 167.2 114 71.9
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 8.0e-40 167.2 114 71.9
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 1.0e-39 166.8 114 74.6
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.4e-39 166.4 112 75.9
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 1.8e-39 166.0 114 71.1
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.8e-39 166.0 114 73.7
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 2.3e-39 165.6 114 71.1
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.3e-39 165.6 114 71.1
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 2.3e-39 165.6 114 71.1
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 2.3e-39 165.6 114 71.1
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.3e-39 165.6 111 73.0
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.5e-38 162.9 104 76.9
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.6e-38 162.2 104 72.1
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.6e-38 162.2 109 70.6
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 3.4e-38 161.8 104 80.8
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 7.5e-38 160.6 115 70.4
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 7.5e-38 160.6 121 68.6
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 7.5e-38 160.6 115 66.1
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 2.2e-37 159.1 112 74.1
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.2e-37 159.1 111 70.3
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 2.8e-37 158.7 112 75.9
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 8.3e-37 157.1 110 74.5
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-36 156.8 104 76.0
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 2.4e-36 155.6 89 85.4
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 5.4e-36 154.5 107 70.1
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 2.7e-35 152.1 114 68.4
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 2.7e-35 152.1 102 77.5
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 4.5e-35 151.4 104 71.2
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.5e-35 151.4 104 72.1
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 7.8e-35 150.6 99 79.8
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.0e-34 150.2 109 66.1
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 1.3e-34 149.8 104 73.1
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.7e-34 149.4 104 73.1
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 1.7e-34 149.4 105 65.7
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 2.9e-34 148.7 104 69.2
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.9e-34 148.7 104 69.2
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 5.0e-34 147.9 106 67.0
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 6.6e-34 147.5 126 65.1
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.5e-33 146.4 110 65.5
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 2.5e-33 145.6 105 70.5
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 3.3e-33 145.2 105 63.8
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 4.3e-33 144.8 102 72.5
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.2e-32 143.3 89 79.8
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.7e-32 141.4 85 81.2
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 4.7e-32 141.4 107 64.5
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.0e-31 140.2 90 73.3
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 5.2e-31 137.9 111 56.8
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 9.8e-30 133.7 101 65.3
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 4.1e-28 128.3 103 64.1
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.2e-27 126.7 103 57.3
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 1.3e-26 123.2 95 58.9
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.2e-24 116.7 109 56.9
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.1e-24 115.9 93 58.1
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 3.6e-24 115.2 75 81.3
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 4.0e-23 111.7 113 46.0
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-20 103.6 70 74.3
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 4.6e-19 98.2 105 55.2
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.8e-19 97.4 56 82.1
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 8.6e-18 94.0 85 56.5
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.3e-15 85.9 66 63.6
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.9e-13 79.0 109 41.3
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.6e-11 73.2 81 50.6
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.0e-10 68.9 52 61.5
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 6.2e-08 61.2 108 32.4
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 2.6e-06 55.8 94 30.9
CSS0033510 Camellia sinensis var. sinensis HOM05D034713 ORTHO05D006862 4.4e-06 55.1 71 47.9


User provided reference genes

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