Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44201 Davidia involucrata HOM05D038375 ORTHO05D025241 1.3e-117 426.4 216 100.0
DCAR_023920 Daucus carota HOM05D038375 ORTHO05D025241 2.4e-18 96.7 162 34.0
Sopen12g010530 Solanum pennellii HOM05D055983 ORTHO05D025241 2.6e-17 93.2 178 34.8
DCAR_027525 Daucus carota HOM05D038375 ORTHO05D025241 3.4e-17 92.8 162 34.0
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 5.1e-13 79.0 155 32.9
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 6.7e-13 78.6 152 32.2
Dinv43288 Davidia involucrata HOM05D022454 ORTHO05D015080 2.8e-11 73.2 151 33.1
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.4e-10 70.9 160 30.0
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.4e-10 70.1 156 30.8
PGSC0003DMG400012943 Solanum tuberosum HOM05D055983 ORTHO05D025241 3.1e-10 69.7 139 33.1
Rhsim04G0206200 Rhododendron simsii HOM05D018759 ORTHO05D012721 5.3e-10 68.9 168 34.5
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 6.9e-10 68.6 154 29.9
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 6.9e-10 68.6 154 29.9
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 2.0e-09 67.0 155 29.7
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 2.0e-09 67.0 154 29.9
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 4.5e-09 65.9 156 32.1
HanXRQChr13g0420231 Helianthus annuus HOM05D002687 ORTHO05D002052 5.9e-09 65.5 129 30.2
Dinv42812 Davidia involucrata HOM05D022454 ORTHO05D015080 1.0e-08 64.7 137 33.6
CAN.G363.23 Capsicum annuum HOM05D019896 ORTHO05D020311 1.3e-08 64.3 142 30.3
SGA_v2.0_scaffold8G04288 Striga asiatica HOM05D066503 ORTHO05D015170 2.2e-08 63.5 157 29.3
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 5.0e-08 62.4 150 28.7
Peaxi162Scf00710g00052 Petunia axillaris HOM05D014175 ORTHO05D015170 8.5e-08 61.6 153 31.4
Nitab4.5_0001873g0070 Nicotiana tabacum HOM05D014175 ORTHO05D015170 1.9e-07 60.5 108 31.5
Peaxi162Scf00010g00351 Petunia axillaris HOM05D002687 ORTHO05D002052 1.9e-07 60.5 116 31.9
Nitab4.5_0000203g0260 Nicotiana tabacum HOM05D014175 ORTHO05D015170 5.5e-07 58.9 135 32.6
Eucgr.J00544 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.2e-06 57.8 146 26.7
Lsat_1_v5_gn_3_112681 Lactuca sativa HOM05D002687 ORTHO05D002052 1.2e-06 57.8 128 29.7
Lsat_1_v5_gn_3_114421 Lactuca sativa HOM05D002687 ORTHO05D002052 2.7e-06 56.6 125 31.2
Sopen05g001230 Solanum pennellii HOM05D014175 ORTHO05D015170 7.9e-06 55.1 131 29.8


User provided reference genes

Program Settings