Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 2.2e-117 425.6 216 100.0
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 6.4e-40 168.3 106 77.4
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 4.6e-38 162.2 104 78.8
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.1e-36 157.5 107 73.8
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 3.3e-36 156.0 107 72.9
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 5.6e-36 155.2 108 70.4
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.3e-35 154.1 108 71.3
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.6e-35 153.7 108 70.4
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 4.8e-35 152.1 104 71.2
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 4.0e-34 149.1 107 67.3
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.2e-33 147.5 106 67.0
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 7.6e-33 144.8 116 64.7
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 9.9e-33 144.4 107 68.2
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.3e-32 144.1 107 65.4
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.7e-32 143.7 106 63.2
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 2.2e-32 143.3 108 67.6
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 2.2e-32 143.3 119 63.9
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.8e-32 142.5 99 70.7
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 8.4e-32 141.4 106 65.1
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 8.4e-32 141.4 108 63.0
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.1e-31 141.0 98 67.3
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 1.9e-31 140.2 107 61.7
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 3.2e-31 139.4 96 72.9
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 5.4e-31 138.7 108 63.9
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 5.4e-31 138.7 107 65.4
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 7.1e-31 138.3 106 67.0
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 9.3e-31 137.9 111 63.1
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.2e-30 137.5 126 57.1
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 2.7e-30 136.3 107 63.6
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 4.6e-30 135.6 98 67.3
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 6.0e-30 135.2 106 64.2
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 6.0e-30 135.2 109 63.3
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 7.9e-30 134.8 109 67.0
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 1.0e-29 134.4 107 59.8
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.3e-29 134.0 107 63.6
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.3e-29 134.0 119 59.7
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 1.8e-29 133.7 102 64.7
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 2.3e-29 133.3 103 68.0
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 2.3e-29 133.3 115 62.6
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 2.3e-29 133.3 107 60.7
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.3e-29 133.3 106 64.2
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 2.3e-29 133.3 103 63.1
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 2.3e-29 133.3 129 58.9
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 2.3e-29 133.3 107 62.6
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 3.0e-29 132.9 103 63.1
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 3.9e-29 132.5 101 62.4
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.9e-29 132.5 107 59.8
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 3.9e-29 132.5 95 67.4
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.9e-29 132.5 98 68.4
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 5.1e-29 132.1 105 65.7
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 5.1e-29 132.1 104 64.4
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 8.7e-29 131.3 107 58.9
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 8.7e-29 131.3 107 58.9
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 8.7e-29 131.3 129 56.6
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.1e-28 131.0 109 63.3
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 2.5e-28 129.8 106 62.3
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 2.5e-28 129.8 90 68.9
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 3.3e-28 129.4 106 62.3
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 5.6e-28 128.6 103 65.0
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 7.4e-28 128.3 103 64.1
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.3e-27 127.5 84 76.2
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.6e-27 127.1 107 58.9
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 2.1e-27 126.7 95 62.1
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.1e-27 126.7 118 56.8
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 2.1e-27 126.7 108 60.2
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 2.8e-27 126.3 103 59.2
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 3.6e-27 125.9 96 61.5
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 8.1e-27 124.8 108 60.2
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.1e-26 124.4 107 60.7
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.1e-26 124.4 118 56.8
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 1.1e-26 124.4 111 63.1
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.4e-26 124.0 79 74.7
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.8e-26 123.6 125 54.4
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.8e-26 123.6 125 54.4
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.8e-26 123.6 115 58.3
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 2.4e-26 123.2 89 66.3
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 5.3e-26 122.1 97 63.9
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 9.0e-26 121.3 107 58.9
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-25 120.9 72 76.4
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 1.2e-25 120.9 78 74.4
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 1.5e-25 120.6 109 57.8
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 1.5e-25 120.6 100 59.0
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 2.6e-25 119.8 78 70.5
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 3.4e-25 119.4 93 62.4
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 3.4e-25 119.4 108 57.4
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 4.5e-25 119.0 93 62.4
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 4.5e-25 119.0 110 54.5
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 4.5e-25 119.0 110 54.5
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 4.5e-25 119.0 108 55.6
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.8e-25 118.6 91 61.5
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 7.6e-25 118.2 94 62.8
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 7.6e-25 118.2 98 62.2
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 7.6e-25 118.2 78 70.5
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.3e-24 117.5 88 62.5
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.7e-24 117.1 110 54.5
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 2.2e-24 116.7 108 56.5
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 2.2e-24 116.7 114 52.6
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 2.2e-24 116.7 91 62.6
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 2.2e-24 116.7 93 61.3
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 2.2e-24 116.7 109 56.0
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 2.9e-24 116.3 108 54.6
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.8e-24 115.9 82 64.6
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 4.9e-24 115.5 114 51.8
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 8.4e-24 114.8 109 54.1
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.1e-23 114.4 113 53.1
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 1.4e-23 114.0 86 61.6
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.9e-23 113.6 107 55.1
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 3.2e-23 112.8 91 63.7
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 5.5e-23 112.1 117 49.6
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 5.5e-23 112.1 117 49.6
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 5.5e-23 112.1 117 49.6
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 7.1e-23 111.7 95 60.0
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 9.3e-23 111.3 93 60.2
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 2.1e-22 110.2 77 66.2
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 3.5e-22 109.4 120 49.2
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 2.3e-21 106.7 92 55.4
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 3.0e-21 106.3 68 69.1
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 1.5e-20 104.0 85 60.0
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 6.2e-19 98.6 74 59.5
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 2.6e-17 93.2 59 72.9
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 4.9e-16 89.0 60 68.3
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 9.3e-15 84.7 71 52.1
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 7.9e-14 81.6 63 55.6
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 3.9e-13 79.3 60 56.7
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.4e-10 70.9 50 74.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 4.1e-10 69.3 85 38.8
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 5.3e-10 68.9 60 50.0
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 3.2e-07 59.7 61 57.4
COL.COLO4_15118 Corchorus olitorius HOM05D006279 ORTHO05D155850 6.1e-06 55.5 45 64.4


User provided reference genes

Program Settings