Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 0.0e+00 1128.2 538 100.0
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 8.7e-288 993.0 468 99.8
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 2.0e-255 885.6 467 88.0
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.1e-253 879.8 468 86.5
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 8.5e-251 870.2 467 85.0
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 8.5e-251 870.2 468 85.9
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.5e-250 869.4 468 84.8
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 3.2e-250 868.2 467 84.8
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 5.5e-250 867.5 468 85.3
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 1.2e-249 866.3 479 83.3
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 6.7e-248 860.5 468 84.6
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 1.2e-247 859.8 468 84.2
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 3.3e-247 858.2 468 83.5
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 4.4e-247 857.8 468 84.2
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 5.7e-247 857.4 468 83.1
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 9.7e-247 856.7 468 83.5
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.1e-245 853.2 468 82.7
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 1.4e-245 852.8 468 82.5
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 2.4e-245 852.0 479 82.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 3.1e-245 851.7 479 81.4
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.6e-244 849.4 479 81.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 2.7e-244 848.6 478 82.6
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 7.7e-244 847.0 479 81.4
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 1.0e-243 846.7 468 84.8
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 1.7e-243 845.9 479 80.6
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 2.9e-243 845.1 491 80.4
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 6.5e-243 844.0 468 82.5
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 4.2e-242 841.3 468 82.1
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 7.2e-242 840.5 478 81.0
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 9.4e-242 840.1 468 82.1
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.2e-241 839.7 468 81.6
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 1.2e-241 839.7 478 80.3
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 4.7e-241 837.8 467 82.4
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 4.7e-241 837.8 478 80.5
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 6.1e-241 837.4 468 82.3
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 1.0e-240 836.6 478 80.5
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 5.7e-239 830.9 489 78.3
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 6.3e-238 827.4 470 81.1
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 8.3e-238 827.0 468 80.1
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 1.1e-237 826.6 478 79.3
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.1e-237 826.6 468 81.6
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.4e-237 826.2 478 78.9
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 9.1e-237 823.5 468 80.1
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 9.1e-237 823.5 468 79.5
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 1.2e-236 823.2 509 75.4
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.6e-236 822.8 478 78.7
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 2.0e-236 822.4 432 88.2
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 3.5e-236 821.6 468 80.3
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 4.5e-236 821.2 541 72.1
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.7e-235 819.3 468 80.8
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 2.9e-235 818.5 478 79.1
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 3.8e-235 818.1 468 79.3
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 6.6e-235 817.4 478 78.2
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.5e-234 816.2 478 78.5
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.5e-234 815.5 478 77.6
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 4.2e-234 814.7 477 77.6
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 4.2e-234 814.7 528 74.6
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 5.5e-234 814.3 478 78.2
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 5.5e-234 814.3 467 79.9
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.2e-233 813.1 478 76.8
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.2e-233 813.1 468 79.5
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.6e-233 812.8 478 77.6
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.6e-233 812.8 478 77.6
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.0e-232 810.1 517 73.5
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 1.4e-232 809.7 478 77.2
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.8e-232 809.3 468 78.2
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 2.3e-232 808.9 523 72.5
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.2e-231 806.6 468 80.3
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.4e-231 805.1 468 80.1
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 4.4e-231 804.7 468 77.8
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.3e-230 803.1 504 74.8
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.6e-228 796.2 476 79.2
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 2.0e-228 795.8 488 75.2
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.3e-227 792.3 524 71.0
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 2.3e-224 782.3 468 76.5
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 8.9e-224 780.4 479 76.2
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 5.8e-223 777.7 525 71.0
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 2.4e-221 772.3 468 77.1
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 2.4e-221 772.3 615 63.3
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.5e-218 763.1 450 78.0
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 4.0e-216 755.0 468 76.5
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 2.1e-212 742.7 418 80.6
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 2.1e-212 742.7 478 73.6
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 5.1e-211 738.0 471 71.5
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 4.0e-208 728.4 470 70.6
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 6.0e-204 714.5 468 73.3
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 2.3e-203 712.6 468 73.1
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 2.5e-194 682.6 369 83.5
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 7.6e-191 671.0 480 66.2
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 2.9e-190 669.1 449 72.4
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 7.6e-183 644.4 423 69.7
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 5.8e-175 618.2 441 66.2
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 2.1e-164 583.2 479 58.5
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 4.7e-148 528.9 516 52.9
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 1.5e-146 523.9 364 66.2
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 1.1e-141 507.7 486 51.9
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 5.5e-141 505.4 456 55.7
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 3.7e-129 466.1 484 48.1
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 1.5e-117 427.6 286 71.3
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.9e-105 386.7 277 69.0
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.1e-101 374.8 201 83.6
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.9e-96 357.5 202 79.2
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 3.7e-89 333.2 318 56.9
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 6.8e-83 312.4 172 81.4
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.3e-76 291.6 182 74.2
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.2e-56 223.4 150 70.7
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.3e-54 217.6 120 83.3
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 9.7e-45 185.7 110 77.3
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.7e-41 174.9 105 81.0
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 5.0e-41 173.3 100 77.0
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 1.8e-38 164.9 111 72.1
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.2e-36 157.9 127 65.4
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.2e-34 152.1 127 63.0
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 8.5e-33 146.0 82 76.8
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.3e-27 126.7 112 60.7
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.3e-27 126.7 112 60.7
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 3.6e-23 114.0 75 70.7
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-21 109.0 78 74.4
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 9.8e-13 79.3 50 72.0
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.4e-11 75.5 41 85.4
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.4e-11 74.7 35 91.4
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.2e-10 72.4 40 82.5
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.2e-10 72.4 40 82.5
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 7.7e-10 69.7 50 70.0
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.5e-08 65.5 34 82.4
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 7.2e-08 63.2 42 61.9


User provided reference genes

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