Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44135 Davidia involucrata HOM05D000057 ORTHO05D000021 4.0e-72 274.6 136 100.0
Hma1.2p1_0301F.1_g118380 Hydrangea macrophylla HOM05D000057 ORTHO05D000021 1.1e-24 117.1 92 67.4
Nitab4.5_0006348g0020 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.7e-14 83.2 99 53.5
Gohir.D08G157000 Gossypium hirsutum HOM05D000057 ORTHO05D000021 6.5e-14 81.3 102 49.0
Gorai.004G163400 Gossypium raimondii HOM05D000057 ORTHO05D000021 6.5e-14 81.3 102 49.0
Lj9P567T20 Lonicera japonica HOM05D000057 ORTHO05D000021 6.5e-14 81.3 99 52.5
TAR388G0001 Trochodendron aralioides HOM05D000057 ORTHO05D000021 4.2e-13 78.6 99 47.5
TAR629G1216 Trochodendron aralioides HOM05D000057 ORTHO05D000021 4.2e-13 78.6 99 47.5
vmacro21026 Vaccinium macrocarpon HOM05D000057 ORTHO05D000021 1.2e-12 77.0 92 53.3
Gohir.A08G136200 Gossypium hirsutum HOM05D000057 ORTHO05D000021 1.6e-12 76.6 102 49.0
Nitab4.5_0008453g0010 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.6e-12 76.6 99 51.5
Rhsim01G0149700 Rhododendron simsii HOM05D000057 ORTHO05D000021 1.6e-12 76.6 107 49.5
Oeu034652.1 Olea europaea HOM05D000057 ORTHO05D000021 3.6e-12 75.5 99 46.5
Oeu005807.1 Olea europaea HOM05D000057 ORTHO05D000021 4.7e-12 75.1 99 45.5
Duzib138G1105 Durio zibethinus HOM05D000057 ORTHO05D000021 2.3e-11 72.8 100 47.0
Peaxi162Scf00013g00253 Petunia axillaris HOM05D000057 ORTHO05D000021 2.3e-11 72.8 99 49.5
Manes.05G047900 Manihot esculenta HOM05D000057 ORTHO05D000021 3.9e-11 72.0 100 45.0
PGSC0003DMG400026010 Solanum tuberosum HOM05D000057 ORTHO05D000021 3.9e-11 72.0 99 47.5
Ciclev10022560m.g Citrus clementina HOM05D000057 ORTHO05D000021 6.7e-11 71.2 102 47.1
Gohir.A11G079600 Gossypium hirsutum HOM05D000057 ORTHO05D000021 6.7e-11 71.2 100 46.0
Solyc01g091030.3 Solanum lycopersicum HOM05D000057 ORTHO05D000021 8.8e-11 70.9 99 46.5
Sopen01g036760 Solanum pennellii HOM05D000057 ORTHO05D000021 8.8e-11 70.9 99 46.5
Thecc.01G379800 Theobroma cacao HOM05D000057 ORTHO05D000021 1.1e-10 70.5 100 45.0
TAR375G0538 Trochodendron aralioides HOM05D000057 ORTHO05D000021 1.1e-10 70.5 96 49.0
FvH4_7g11280 Fragaria vesca HOM05D000057 ORTHO05D000021 1.5e-10 70.1 104 46.2
FAN03G2970 Fragaria x ananassa HOM05D000057 ORTHO05D000021 1.5e-10 70.1 104 46.2
FAN06G2393 Fragaria x ananassa HOM05D000057 ORTHO05D000021 1.5e-10 70.1 104 46.2
FAN06G2441 Fragaria x ananassa HOM05D000057 ORTHO05D000021 1.5e-10 70.1 104 46.2
RcHm_v2.0_Chr1g0349431 Rosa chinensis HOM05D000057 ORTHO05D000021 1.5e-10 70.1 103 47.6
Gohir.D11G084300 Gossypium hirsutum HOM05D000057 ORTHO05D000021 2.6e-10 69.3 100 46.0
Gorai.007G089900 Gossypium raimondii HOM05D000057 ORTHO05D000021 2.6e-10 69.3 100 46.0
FAN01G2251 Fragaria x ananassa HOM05D000057 ORTHO05D000021 4.4e-10 68.6 104 45.2
CSS0019390 Camellia sinensis var. sinensis HOM05D000057 ORTHO05D000021 5.7e-10 68.2 101 49.5
Nn1g01094 Nelumbo nucifera HOM05D000057 ORTHO05D000021 7.4e-10 67.8 100 43.0
FAN10G1522 Fragaria x ananassa HOM05D000057 ORTHO05D000021 1.7e-09 66.6 104 44.2
Nn6g34051 Nelumbo nucifera HOM05D000057 ORTHO05D000021 1.7e-09 66.6 108 46.3
CSS0028750 Camellia sinensis var. sinensis HOM05D000057 ORTHO05D000021 2.8e-09 65.9 101 48.5
FAN10G0349 Fragaria x ananassa HOM05D000057 ORTHO05D000021 2.8e-09 65.9 104 44.2
Lj7P532T42 Lonicera japonica HOM05D000057 ORTHO05D000021 6.3e-09 64.7 102 45.1
Rhsim07G0030100 Rhododendron simsii HOM05D000057 ORTHO05D000021 6.3e-09 64.7 94 42.6
PGR042G0472 Punica granatum HOM05D000057 ORTHO05D000021 8.2e-09 64.3 101 43.6
Cfa011191 Carpinus fangiana HOM05D000057 ORTHO05D000021 2.4e-08 62.8 100 45.0
Duzib133G1438 Durio zibethinus HOM05D000057 ORTHO05D000021 2.4e-08 62.8 100 45.0
Manes.01G267900 Manihot esculenta HOM05D000057 ORTHO05D000021 2.4e-08 62.8 100 43.0
Haze_02657 Corylus avellana HOM05D000057 ORTHO05D000021 3.1e-08 62.4 100 45.0
Migut.B01608 Erythranthe guttata HOM05D000057 ORTHO05D000021 3.1e-08 62.4 98 41.8
Potri.014G066900 Populus trichocarpa HOM05D000057 ORTHO05D000021 4.1e-08 62.0 103 44.7
PGSC0003DMG400004785 Solanum tuberosum HOM05D000057 ORTHO05D000021 4.1e-08 62.0 100 41.0
Gohir.A12G101100 Gossypium hirsutum HOM05D000057 ORTHO05D000021 5.3e-08 61.6 101 42.6
Nitab4.5_0004575g0050 Nicotiana tabacum HOM05D000057 ORTHO05D000021 5.3e-08 61.6 114 40.4
TWI59G1097 Tripterygium wilfordii HOM05D000057 ORTHO05D000021 5.3e-08 61.6 101 44.6
Nitab4.5_0004575g0040 Nicotiana tabacum HOM05D000057 ORTHO05D000021 7.0e-08 61.2 100 42.0
QL04p039508 Quercus lobata HOM05D000057 ORTHO05D000021 1.5e-07 60.1 99 42.4
CANSAT56G0850 Cannabis sativa HOM05D000057 ORTHO05D000021 2.0e-07 59.7 97 45.4
CANSAT56G2873 Cannabis sativa HOM05D000057 ORTHO05D000021 2.0e-07 59.7 97 45.4
CiPaw.13G034000 Carya illinoinensis HOM05D000057 ORTHO05D000021 2.0e-07 59.7 105 41.9
Dinv21594 Davidia involucrata HOM05D000057 ORTHO05D000021 2.0e-07 59.7 96 43.8
Cfa012779 Carpinus fangiana HOM05D000057 ORTHO05D000021 2.6e-07 59.3 116 39.7
CiPaw.14G026800 Carya illinoinensis HOM05D000057 ORTHO05D000021 2.6e-07 59.3 106 41.5
ECA236G4741 Erigeron canadensis HOM05D000057 ORTHO05D000021 2.6e-07 59.3 107 42.1
MD02G1205700 Malus domestica HOM05D000057 ORTHO05D000021 2.6e-07 59.3 103 43.7
Sc01g0009320 Simmondsia chinensis HOM05D000057 ORTHO05D000021 2.6e-07 59.3 95 36.8
Gohir.D12G104000 Gossypium hirsutum HOM05D000057 ORTHO05D000021 3.4e-07 58.9 101 41.6
Gorai.008G113100 Gossypium raimondii HOM05D000057 ORTHO05D000021 3.4e-07 58.9 101 41.6
Nitab4.5_0003983g0010 Nicotiana tabacum HOM05D000057 ORTHO05D000021 4.5e-07 58.5 114 37.7
Solyc08g079150.1 Solanum lycopersicum HOM05D000057 ORTHO05D000021 4.5e-07 58.5 95 40.0
Nn1g08246 Nelumbo nucifera HOM05D000057 ORTHO05D000021 5.9e-07 58.2 100 40.0
Sopen08g027600 Solanum pennellii HOM05D000057 ORTHO05D000021 5.9e-07 58.2 95 38.9
GSVIVG01001263001 Vitis vinifera HOM05D000057 ORTHO05D000021 7.7e-07 57.8 101 40.6
Nitab4.5_0004740g0030 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.3e-06 57.0 103 38.8
Nitab4.5_0007886g0020 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.3e-06 57.0 100 40.0
HanXRQChr06g0169431 Helianthus annuus HOM05D000057 ORTHO05D000021 2.2e-06 56.2 101 43.6
Oeu055508.1 Olea europaea HOM05D000057 ORTHO05D000021 2.2e-06 56.2 104 38.5
Potri.002G145300 Populus trichocarpa HOM05D000057 ORTHO05D000021 2.2e-06 56.2 103 40.8
Oeu055509.1 Olea europaea HOM05D000057 ORTHO05D000021 2.9e-06 55.8 104 38.5
RcHm_v2.0_Chr7g0202161 Rosa chinensis HOM05D000057 ORTHO05D000021 2.9e-06 55.8 111 36.9
MD07G1117400 Malus domestica HOM05D000057 ORTHO05D000021 6.5e-06 54.7 103 43.7


User provided reference genes

Program Settings