Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 8.9e-128 460.3 235 100.0
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.1e-93 347.1 236 76.3
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.6e-89 332.0 213 80.3
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 3.1e-88 328.9 238 70.6
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.5e-87 326.6 217 75.1
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 5.8e-87 324.7 211 78.7
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 6.4e-86 321.2 219 74.4
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 1.9e-85 319.7 233 69.5
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 2.4e-85 319.3 211 74.9
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 2.4e-85 319.3 230 69.6
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 6.7e-83 311.2 196 77.6
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 5.6e-82 308.1 230 68.7
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.1e-81 306.2 220 70.0
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 2.1e-81 306.2 237 69.6
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.8e-80 303.1 227 70.9
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.8e-80 303.1 234 66.7
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.8e-80 303.1 229 68.1
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 6.9e-80 301.2 213 69.5
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.0e-80 300.8 190 77.4
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 9.0e-80 300.8 191 74.3
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 1.5e-79 300.1 234 67.5
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 2.6e-79 299.3 216 65.7
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 3.4e-79 298.9 192 75.5
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 3.4e-79 298.9 195 77.4
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 3.4e-79 298.9 225 69.3
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 4.5e-79 298.5 217 68.7
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.5e-79 298.5 190 76.8
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.5e-79 298.5 190 76.8
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 4.5e-79 298.5 217 70.0
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.8e-79 298.1 190 76.8
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 1.3e-78 297.0 229 68.6
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.9e-78 295.8 183 78.1
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 2.9e-78 295.8 217 70.0
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.7e-76 289.3 190 75.3
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 3.5e-76 288.9 176 80.1
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 4.6e-76 288.5 175 81.7
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.0e-75 287.3 236 65.7
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.3e-75 287.0 184 76.1
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.3e-75 287.0 206 68.4
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.3e-75 287.0 228 67.1
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.3e-75 286.2 193 72.5
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 3.0e-75 285.8 184 76.1
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 6.7e-75 284.6 228 67.5
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 8.7e-75 284.3 193 74.6
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 8.7e-75 284.3 233 63.9
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.1e-74 283.9 228 65.8
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.1e-74 283.9 193 71.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.9e-74 283.1 218 67.4
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 2.5e-74 282.7 207 69.6
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.5e-74 282.7 228 65.8
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 3.3e-74 282.3 227 65.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 3.3e-74 282.3 195 70.8
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 4.3e-74 282.0 188 76.1
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 7.4e-74 281.2 209 68.9
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 9.6e-74 280.8 184 76.1
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 3.7e-73 278.9 209 68.9
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 3.7e-73 278.9 209 67.9
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 6.3e-73 278.1 216 63.0
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 6.3e-73 278.1 181 74.6
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 8.2e-73 277.7 207 69.6
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 8.2e-73 277.7 185 74.1
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 9.0e-72 274.2 194 70.6
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 7.6e-71 271.2 191 69.6
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 7.6e-71 271.2 176 77.8
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.0e-70 270.8 182 72.0
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.3e-70 270.4 250 58.8
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 1.7e-70 270.0 185 70.3
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.7e-70 270.0 228 61.0
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 2.9e-70 269.2 185 70.3
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 5.0e-70 268.5 226 61.5
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 6.5e-70 268.1 185 69.7
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 6.5e-70 268.1 213 70.4
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.4e-69 266.9 185 69.7
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.4e-69 266.9 207 64.3
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.4e-69 266.9 248 62.5
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.9e-69 266.5 186 68.8
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.9e-69 266.5 186 68.3
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.2e-68 263.8 185 69.2
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.2e-68 263.8 186 68.3
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 4.6e-68 261.9 207 65.2
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 5.1e-67 258.5 233 62.7
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.3e-66 255.4 227 63.4
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.8e-65 251.9 173 72.3
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.8e-64 250.0 197 71.6
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 5.3e-64 248.4 173 71.1
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.5e-61 239.6 276 50.4
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 2.5e-61 239.6 192 63.0
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 5.7e-58 228.4 185 62.2
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 3.7e-57 225.7 153 75.2
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 3.1e-56 222.6 149 73.2
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 5.9e-55 218.4 139 77.7
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 2.1e-52 209.9 190 62.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.4e-51 207.2 145 70.3
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.4e-51 207.2 179 64.2
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 2.3e-51 206.5 187 60.4
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.1e-50 204.1 139 76.3
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.3e-49 200.7 119 84.9
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 2.8e-49 199.5 127 78.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 6.3e-49 198.4 152 67.1
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.3e-49 198.4 122 82.0
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.6e-47 193.0 139 74.1
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 2.3e-43 179.9 156 64.1
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.1e-40 171.0 152 57.9
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.2e-39 167.5 109 78.0
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.6e-39 167.2 171 53.2
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.6e-36 157.1 106 74.5
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.2e-35 152.1 98 78.6
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 5.2e-35 152.1 128 60.9
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 8.8e-35 151.4 178 46.1
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 4.7e-28 129.0 99 64.6
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 4.0e-27 125.9 168 43.5
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.5e-23 112.8 133 46.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 9.5e-21 104.8 73 68.5
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 2.2e-17 93.6 165 38.2
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.8e-16 90.5 79 59.5
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 4.1e-16 89.4 58 74.1
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 8.9e-11 71.6 60 56.7
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 4.4e-10 69.3 78 50.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.7e-09 67.4 48 62.5
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 1.1e-08 64.7 42 69.0
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.4e-08 64.3 99 43.4
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 2.7e-07 60.1 66 50.0


User provided reference genes

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