Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 9.5e-239 829.7 399 100.0
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 4.0e-189 664.8 397 81.4
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 6.9e-189 664.1 397 81.4
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 9.3e-186 653.7 397 78.1
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 1.2e-185 653.3 383 81.5
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.6e-182 642.9 384 80.7
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.8e-181 639.4 388 80.4
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 4.0e-181 638.3 384 78.6
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 1.2e-180 636.7 385 79.5
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 8.4e-179 630.6 385 79.0
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 4.2e-178 628.2 399 74.9
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 5.5e-178 627.9 381 79.0
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 2.1e-177 625.9 381 77.2
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 2.3e-176 622.5 408 74.3
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 5.1e-176 621.3 385 77.1
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 9.6e-175 617.1 381 76.9
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 9.6e-175 617.1 388 78.6
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.6e-174 616.3 394 74.1
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 2.8e-174 615.5 394 74.9
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.8e-173 612.8 385 75.8
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 6.9e-173 610.9 385 76.6
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 1.5e-172 609.8 385 75.1
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 2.0e-172 609.4 385 76.6
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 2.6e-172 609.0 383 74.9
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 2.6e-172 609.0 384 75.3
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 1.3e-171 606.7 385 75.3
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.2e-171 605.9 381 75.1
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 2.9e-171 605.5 384 74.5
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 3.8e-171 605.1 381 75.1
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 1.1e-170 603.6 395 73.4
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 1.1e-170 603.6 385 76.6
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 9.3e-170 600.5 384 74.7
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 2.7e-169 599.0 398 72.1
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 1.0e-168 597.0 385 75.3
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 3.0e-168 595.5 383 73.6
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 2.5e-167 592.4 410 71.0
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 7.4e-167 590.9 387 73.4
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 1.3e-166 590.1 390 72.1
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 2.2e-166 589.3 380 73.2
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 2.8e-166 589.0 386 73.8
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 4.8e-166 588.2 385 72.2
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 8.2e-166 587.4 422 69.4
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.1e-165 587.0 386 73.6
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 4.1e-165 585.1 373 76.4
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.1e-165 585.1 386 73.1
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 4.1e-165 585.1 385 72.2
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 5.3e-165 584.7 386 73.3
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.3e-165 584.7 386 73.3
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.3e-165 584.7 386 73.3
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 5.3e-165 584.7 386 73.1
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-164 582.8 386 72.8
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.6e-164 582.4 388 73.5
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 3.4e-164 582.0 381 72.4
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.2e-163 579.3 386 72.5
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 2.9e-163 578.9 385 70.9
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 3.8e-163 578.6 384 72.7
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.1e-162 577.0 381 71.1
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.4e-162 576.6 387 73.4
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 2.5e-162 575.9 392 72.7
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 7.2e-162 574.3 387 72.4
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.6e-161 573.2 436 65.4
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 2.1e-161 572.8 359 77.2
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 4.6e-161 571.6 387 72.9
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.8e-160 569.7 390 70.5
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 2.3e-160 569.3 398 70.6
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.2e-158 562.8 435 64.8
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 2.2e-158 562.8 386 70.2
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.8e-158 562.4 383 71.3
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 8.2e-158 560.8 399 68.9
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 5.3e-157 558.1 386 71.2
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 6.9e-157 557.8 388 70.6
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 2.0e-156 556.2 395 69.4
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 3.4e-156 555.4 386 70.7
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 7.7e-156 554.3 382 70.4
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 7.7e-156 554.3 382 70.4
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 3.8e-155 552.0 398 67.1
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.4e-154 550.1 385 71.7
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.9e-154 549.7 382 69.9
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 3.2e-154 548.9 401 69.1
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 2.7e-153 545.8 395 68.6
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 7.9e-153 544.3 396 69.2
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 3.9e-152 542.0 382 70.2
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 2.0e-151 539.7 385 69.4
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 4.4e-151 538.5 385 69.9
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 1.3e-150 537.0 418 64.4
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 2.2e-150 536.2 392 67.3
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.4e-144 516.9 391 67.5
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.1e-141 507.3 398 65.6
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 3.1e-141 505.8 383 63.4
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 5.3e-141 505.0 383 62.9
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.0e-139 500.7 379 64.6
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 2.2e-139 499.6 389 65.6
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 3.2e-138 495.7 382 64.1
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.4e-136 490.3 379 64.1
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 1.3e-134 483.8 593 46.2
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.6e-127 459.5 335 66.6
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 7.0e-125 451.4 257 81.3
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 6.0e-100 368.6 241 73.4
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-93 347.8 192 83.9
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 2.6e-87 326.6 183 83.6
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.0e-75 288.1 163 81.6
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 6.6e-75 285.4 467 37.0
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 8.7e-75 285.0 191 68.6
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.1e-73 280.4 223 58.7
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.1e-69 268.1 203 63.1
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.5e-69 265.8 191 68.1
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 4.6e-68 262.7 191 67.5
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 2.1e-60 237.3 516 31.2
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.5e-60 236.5 536 30.6
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 5.9e-55 219.2 448 31.5
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 6.7e-43 179.1 137 62.0
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 4.1e-40 169.9 363 30.9
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 1.2e-36 158.3 108 69.4
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 6.1e-28 129.4 92 64.1
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 6.7e-27 125.9 82 68.3
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-24 118.6 161 43.5
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 2.4e-24 117.5 68 80.9
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.0e-22 112.1 61 78.7
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 5.7e-18 96.3 58 72.4
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 5.4e-16 89.7 156 34.0
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 3.6e-12 77.0 280 25.7
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.2e-10 72.0 78 56.4
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 4.4e-10 70.1 42 69.0
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 1.1e-08 65.5 42 69.0
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 1.4e-08 65.1 35 85.7
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 1.0e-06 58.9 57 50.9


User provided reference genes

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