Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 8.7e-54 213.4 108 100.0
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 6.0e-39 164.1 91 90.1
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 8.7e-38 160.2 103 77.7
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 1.1e-37 159.8 90 87.8
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 1.1e-37 159.8 103 77.7
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 1.1e-37 159.8 99 80.8
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 1.9e-37 159.1 90 87.8
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 2.5e-37 158.7 100 81.0
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 3.3e-37 158.3 90 85.6
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 3.3e-37 158.3 90 86.7
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 4.3e-37 157.9 90 86.7
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 5.7e-37 157.5 90 84.4
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 5.7e-37 157.5 90 84.4
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 5.7e-37 157.5 90 85.6
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 5.7e-37 157.5 90 86.7
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 7.4e-37 157.1 90 82.2
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 7.4e-37 157.1 99 79.8
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 7.4e-37 157.1 99 79.8
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 9.7e-37 156.8 98 80.6
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 1.3e-36 156.4 90 85.6
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 1.3e-36 156.4 90 85.6
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.3e-36 156.4 90 85.6
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.3e-36 156.4 90 85.6
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 1.3e-36 156.4 90 83.3
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.6e-36 156.0 90 84.4
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.6e-36 156.0 90 84.4
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 2.2e-36 155.6 90 85.6
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 2.2e-36 155.6 99 78.8
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 2.2e-36 155.6 90 86.7
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 2.2e-36 155.6 90 86.7
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.8e-36 155.2 90 84.4
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 3.7e-36 154.8 90 85.6
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 3.7e-36 154.8 90 85.6
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 4.8e-36 154.5 90 85.6
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 6.3e-36 154.1 90 84.4
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 1.1e-35 153.3 109 72.5
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 1.1e-35 153.3 90 82.2
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.1e-35 153.3 90 83.3
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 1.1e-35 153.3 87 83.9
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 1.1e-35 153.3 110 71.8
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 1.4e-35 152.9 90 80.0
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 2.4e-35 152.1 88 84.1
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 3.1e-35 151.8 90 83.3
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 4.1e-35 151.4 90 82.2
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 4.1e-35 151.4 90 81.1
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 4.1e-35 151.4 90 83.3
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 6.9e-35 150.6 90 81.1
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 6.9e-35 150.6 90 78.9
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 9.0e-35 150.2 90 81.1
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 9.0e-35 150.2 90 80.0
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 9.0e-35 150.2 90 82.2
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 1.2e-34 149.8 90 82.2
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 1.5e-34 149.4 90 81.1
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.5e-34 149.4 90 80.0
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 2.6e-34 148.7 99 73.7
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 2.6e-34 148.7 90 80.0
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 2.6e-34 148.7 90 81.1
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 2.6e-34 148.7 100 77.0
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 3.4e-34 148.3 90 81.1
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 3.4e-34 148.3 90 81.1
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 3.4e-34 148.3 90 81.1
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 3.4e-34 148.3 90 80.0
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 4.5e-34 147.9 90 80.0
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 4.5e-34 147.9 90 77.8
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 5.9e-34 147.5 91 80.2
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 5.9e-34 147.5 90 78.9
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 5.9e-34 147.5 90 80.0
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 5.9e-34 147.5 90 77.8
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 5.9e-34 147.5 91 79.1
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 7.6e-34 147.1 98 75.5
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 7.6e-34 147.1 92 79.3
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 7.6e-34 147.1 90 80.0
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 7.6e-34 147.1 90 78.9
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 1.0e-33 146.7 90 76.7
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 1.3e-33 146.4 99 72.7
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 1.7e-33 146.0 91 79.1
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.7e-33 146.0 100 74.0
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 1.7e-33 146.0 90 77.8
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 1.7e-33 146.0 90 78.9
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 2.2e-33 145.6 91 78.0
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 2.2e-33 145.6 110 70.0
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 2.2e-33 145.6 90 80.0
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 2.2e-33 145.6 90 77.8
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 3.8e-33 144.8 90 76.7
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 3.8e-33 144.8 109 67.9
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 3.8e-33 144.8 100 70.0
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 5.0e-33 144.4 98 74.5
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 6.5e-33 144.1 90 75.6
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 8.5e-33 143.7 89 78.7
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 8.5e-33 143.7 90 77.8
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 2.5e-32 142.1 90 76.7
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 3.2e-32 141.7 91 76.9
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 4.2e-32 141.4 92 76.1
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 5.5e-32 141.0 92 75.0
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 9.3e-32 140.2 91 75.8
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 1.2e-31 139.8 90 75.6
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 1.6e-31 139.4 90 74.4
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 2.1e-31 139.0 92 73.9
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 3.6e-31 138.3 91 74.7
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 3.6e-31 138.3 91 73.6
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 1.0e-30 136.7 91 74.7
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 1.4e-30 136.3 90 73.3
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 8.8e-30 133.7 91 73.6
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 8.8e-30 133.7 91 73.6
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 8.8e-30 133.7 91 73.6
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 8.8e-30 133.7 91 73.6
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 8.8e-30 133.7 91 73.6
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 1.1e-29 133.3 91 73.6
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.1e-29 133.3 109 65.1
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 1.5e-29 132.9 89 69.7
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 1.9e-29 132.5 91 72.5
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 1.9e-29 132.5 91 72.5
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 1.9e-29 132.5 91 72.5
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 1.9e-29 132.5 91 72.5
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 3.3e-29 131.7 91 72.5
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 7.4e-29 130.6 90 68.9
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 1.3e-28 129.8 80 77.5
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 1.3e-28 129.8 101 66.3
QL04p026246 Quercus lobata HOM05D005488 ORTHO05D006568 1.7e-28 129.4 70 87.1
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 2.2e-28 129.0 122 57.4
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 3.7e-28 128.3 144 52.1
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 4.1e-27 124.8 160 47.5
Zm00001eb071630 Zea mays HOM05D005488 ORTHO05D006568 9.1e-27 123.6 72 84.7
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 2.6e-26 122.1 90 66.7
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 7.7e-26 120.6 89 60.7
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 1.0e-25 120.2 81 72.8
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 5.5e-24 114.4 91 64.8
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 3.6e-23 111.7 97 63.9
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 6.1e-23 110.9 77 71.4
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 1.8e-22 109.4 90 54.4
Gohir.D07G176200 Gossypium hirsutum HOM05D005488 ORTHO05D006568 1.1e-21 106.7 74 71.6
Gorai.007G266500 Gossypium raimondii HOM05D005488 ORTHO05D006568 6.5e-17 90.9 65 67.7
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 4.7e-15 84.7 61 72.1
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 1.8e-11 72.8 42 85.7
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 7.0e-11 70.9 69 59.4
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 2.0e-10 69.3 41 80.5
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 3.5e-10 68.6 42 81.0
MD00G1150500 Malus domestica HOM05D005488 ORTHO05D006568 6.5e-09 64.3 37 81.1
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 4.7e-07 58.2 41 73.2
THA.LOC104799611 Tarenaya hassleriana HOM05D002686 ORTHO05D003222 2.3e-06 55.8 97 34.0
CAN.G1661.28 Capsicum annuum HOM05D002686 ORTHO05D003222 3.0e-06 55.5 95 34.7
EL10Ac8g19011 Beta vulgaris HOM05D002686 ORTHO05D003222 6.7e-06 54.3 95 31.6


User provided reference genes

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