Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44010 Davidia involucrata HOM05D005609 ORTHO05D006871 1.6e-64 249.2 124 100.0
Hma1.2p1_0973F.1_g243010 Hydrangea macrophylla HOM05D005609 ORTHO05D006871 7.7e-30 134.0 124 66.9
GSVIVG01022468001 Vitis vinifera HOM05D005609 ORTHO05D006871 2.5e-28 129.0 121 61.2
Actinidia05794 Actinidia chinensis HOM05D005609 ORTHO05D006871 8.0e-27 124.0 121 60.3
Dinv43582 Davidia involucrata HOM05D005609 ORTHO05D006871 1.3e-24 116.7 99 68.7
Rhsim07G0039900 Rhododendron simsii HOM05D005609 ORTHO05D006871 1.7e-24 116.3 114 59.6
Cfa022162 Carpinus fangiana HOM05D005609 ORTHO05D006871 8.2e-24 114.0 121 56.2
Lsat_1_v5_gn_4_38680 Lactuca sativa HOM05D005609 ORTHO05D006871 1.1e-23 113.6 123 52.8
CiPaw.14G015500 Carya illinoinensis HOM05D005609 ORTHO05D006871 5.3e-23 111.3 121 54.5
Haze_02915 Corylus avellana HOM05D005609 ORTHO05D006871 5.9e-22 107.8 139 49.6
Nitab4.5_0011341g0010 Nicotiana tabacum HOM05D005609 ORTHO05D006871 2.9e-21 105.5 115 54.8
QL04p025874 Quercus lobata HOM05D005609 ORTHO05D006871 2.9e-21 105.5 115 53.0
PGSC0003DMG403017205 Solanum tuberosum HOM05D005609 ORTHO05D006871 8.5e-21 104.0 121 52.1
Aqoxy3G02536 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 1.1e-20 103.6 116 50.0
Nn1g00634 Nelumbo nucifera HOM05D005609 ORTHO05D006871 1.9e-20 102.8 116 53.4
vmacro13537 Vaccinium macrocarpon HOM05D005609 ORTHO05D006871 2.5e-20 102.4 114 56.1
Solyc09g090460.3 Solanum lycopersicum HOM05D005609 ORTHO05D006871 3.2e-20 102.1 121 52.1
Sopen09g033380 Solanum pennellii HOM05D005609 ORTHO05D006871 3.2e-20 102.1 121 52.1
MSTRG.20658 Avicennia marina HOM05D005609 ORTHO05D006871 4.2e-20 101.7 121 53.7
Nitab4.5_0000204g0040 Nicotiana tabacum HOM05D005609 ORTHO05D006871 4.2e-20 101.7 115 53.9
CAN.G221.2 Capsicum annuum HOM05D005609 ORTHO05D006871 7.2e-20 100.9 121 52.9
PSO017G2814 Papaver somniferum HOM05D005609 ORTHO05D006871 9.4e-20 100.5 118 49.2
PSO063G0967 Papaver somniferum HOM05D005609 ORTHO05D006871 1.2e-19 100.1 118 50.0
CANSAT25G0413 Cannabis sativa HOM05D005609 ORTHO05D006871 4.7e-19 98.2 123 49.6
TWI23G1015 Tripterygium wilfordii HOM05D005609 ORTHO05D006871 8.0e-19 97.4 121 50.4
Oeu021960.2 Olea europaea HOM05D005609 ORTHO05D006871 3.0e-18 95.5 115 50.4
Manes.05G059500 Manihot esculenta HOM05D005609 ORTHO05D006871 1.2e-17 93.6 123 50.4
Migut.K00777 Erythranthe guttata HOM05D005609 ORTHO05D006871 1.5e-17 93.2 123 49.6
HanXRQChr02g0046691 Helianthus annuus HOM05D005609 ORTHO05D006871 4.4e-17 91.7 117 46.2
FAN10G3950 Fragaria x ananassa HOM05D005609 ORTHO05D006871 7.5e-17 90.9 122 49.2
Prupe.2G114600 Prunus persica HOM05D005609 ORTHO05D006871 7.5e-17 90.9 121 49.6
FAN10G3233 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.3e-16 90.1 122 49.2
Potri.002G134900 Populus trichocarpa HOM05D005609 ORTHO05D006871 1.7e-16 89.7 122 48.4
FvH4_7g08680 Fragaria vesca HOM05D005609 ORTHO05D006871 3.7e-16 88.6 122 48.4
PGR142G0047 Punica granatum HOM05D005609 ORTHO05D006871 4.8e-16 88.2 120 47.5
ClCG05G002820 Citrullus lanatus HOM05D005609 ORTHO05D006871 1.1e-15 87.0 118 43.2
Peaxi162Scf00103g01924 Petunia axillaris HOM05D005609 ORTHO05D006871 1.4e-15 86.7 121 44.6
EL10Ac1g00709 Beta vulgaris HOM05D005609 ORTHO05D006871 1.8e-15 86.3 111 46.8
CSS0041858 Camellia sinensis var. sinensis HOM05D005609 ORTHO05D006871 1.8e-15 86.3 86 58.1
RcHm_v2.0_Chr1g0343911 Rosa chinensis HOM05D005609 ORTHO05D006871 1.8e-15 86.3 122 45.1
Sed0001863 Sechium edule HOM05D005609 ORTHO05D006871 1.8e-15 86.3 119 41.2
MD07G1087900 Malus domestica HOM05D005609 ORTHO05D006871 2.4e-15 85.9 121 45.5
SGA_v2.0_scaffold45G17248 Striga asiatica HOM05D005609 ORTHO05D006871 2.4e-15 85.9 125 48.0
unitig_26.g8865 Utricularia gibba HOM05D005609 ORTHO05D006871 2.4e-15 85.9 124 42.7
ECA234G4049 Erigeron canadensis HOM05D005609 ORTHO05D006871 4.1e-15 85.1 87 55.2
CsaV3_3G010350 Cucumis sativus L. HOM05D005609 ORTHO05D006871 2.7e-14 82.4 119 42.9
CDE02G3958 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 3.5e-14 82.0 109 45.0
MD02G1225900 Malus domestica HOM05D005609 ORTHO05D006871 3.5e-14 82.0 120 45.0
Duzib268G1371 Durio zibethinus HOM05D005609 ORTHO05D006871 5.9e-14 81.3 120 43.3
Lj9A548T58 Lonicera japonica HOM05D005609 ORTHO05D006871 7.7e-14 80.9 113 46.0
TAR375G0879 Trochodendron aralioides HOM05D005609 ORTHO05D006871 1.0e-13 80.5 71 59.2
Thecc.02G366200 Theobroma cacao HOM05D005609 ORTHO05D006871 1.3e-13 80.1 114 43.9
FAN03G0926 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.7e-13 79.7 122 46.7
FAN06G0131 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.7e-13 79.7 93 49.5
Eucgr.E03531 Eucalyptus grandis HOM05D005609 ORTHO05D006871 2.9e-13 79.0 109 46.8
AUR62013794 Chenopodium quinoa HOM05D005609 ORTHO05D006871 5.0e-13 78.2 122 40.2
AUR62023361 Chenopodium quinoa HOM05D005609 ORTHO05D006871 6.5e-13 77.8 122 41.0
Sc26g0001790 Simmondsia chinensis HOM05D005609 ORTHO05D006871 8.5e-13 77.4 123 42.3
MELO3C006259.2 Cucumis melo HOM05D005609 ORTHO05D006871 4.2e-12 75.1 95 43.2
Cpa.g.sc52.59 Carica papaya HOM05D005609 ORTHO05D006871 4.7e-11 71.6 156 37.2
DCAR_029525 Daucus carota HOM05D005609 ORTHO05D006871 1.4e-10 70.1 73 50.7
TPR.G20612 Trifolium pratense HOM05D005609 ORTHO05D006871 2.3e-10 69.3 127 37.8
ATR0665G596 Amborella trichopoda HOM05D005609 ORTHO05D006871 4.0e-10 68.6 121 39.7
Aqoxy7G01889 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 2.0e-09 66.2 72 50.0
Lj1g0022406 Lotus japonicus HOM05D005609 ORTHO05D006871 2.0e-09 66.2 116 38.8
arahy.Tifrunner.gnm1.ann1.HH0QF2 Arachis hypogaea HOM05D005609 ORTHO05D006871 1.3e-08 63.5 81 43.2
Gorai.006G186900 Gossypium raimondii HOM05D005609 ORTHO05D006871 1.7e-08 63.2 120 39.2
Medtr7g450930 Medicago truncatula HOM05D005609 ORTHO05D006871 1.7e-08 63.2 93 44.1
arahy.Tifrunner.gnm1.ann1.R04L27 Arachis hypogaea HOM05D005609 ORTHO05D006871 2.2e-08 62.8 77 44.2
Gohir.A09G169400 Gossypium hirsutum HOM05D005609 ORTHO05D006871 3.7e-08 62.0 120 39.2
Gohir.D09G165100 Gossypium hirsutum HOM05D005609 ORTHO05D006871 4.9e-08 61.6 120 38.3
CDE11G0052 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 1.4e-07 60.1 65 47.7
Ah.16g103320 Amaranthus hybridus HOM05D005609 ORTHO05D006871 1.8e-07 59.7 78 42.3
Lalb_Chr03g0040871 Lupinus albus HOM05D005609 ORTHO05D006871 1.8e-07 59.7 125 36.0
Hund17127 Selenicereus undatus HOM05D005609 ORTHO05D006871 1.8e-07 59.7 65 49.2
Glyma.08G340000 Glycine max HOM05D005609 ORTHO05D006871 1.2e-06 57.0 79 40.5
VMungo1080G1222 Vigna mungo HOM05D005609 ORTHO05D006871 1.6e-06 56.6 88 38.6
Phvul.008G139400 Phaseolus vulgaris HOM05D005609 ORTHO05D006871 2.0e-06 56.2 79 40.5
Ca_20451_v3 Cicer arietinum L. HOM05D005609 ORTHO05D006871 7.7e-06 54.3 128 35.9


User provided reference genes

Program Settings