Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 3.0e-58 228.4 125 100.0
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 4.4e-33 144.8 127 72.4
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 3.0e-26 122.1 110 70.9
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 6.0e-22 107.8 145 53.1
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 7.8e-22 107.5 141 53.9
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.6e-19 99.8 126 52.4
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 4.7e-19 98.2 80 72.5
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 8.0e-19 97.4 97 61.9
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 1.4e-18 96.7 126 53.2
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 4.0e-18 95.1 83 67.5
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 8.9e-18 94.0 106 62.3
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 1.2e-17 93.6 97 61.9
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 4.4e-17 91.7 123 53.7
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 4.4e-17 91.7 125 48.8
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 5.8e-17 91.3 74 71.6
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 5.8e-17 91.3 95 60.0
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 7.5e-17 90.9 156 46.2
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 7.5e-17 90.9 70 77.1
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 9.8e-17 90.5 106 56.6
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.3e-16 90.1 71 77.5
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 2.2e-16 89.4 133 50.4
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 1.1e-15 87.0 86 61.6
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 1.4e-15 86.7 96 58.3
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 1.9e-15 86.3 86 62.8
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 5.4e-15 84.7 123 50.4
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 5.4e-15 84.7 112 55.4
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 5.4e-15 84.7 125 51.2
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 7.0e-15 84.3 72 69.4
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 9.2e-15 84.0 125 48.0
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 9.2e-15 84.0 94 59.6
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 2.1e-14 82.8 164 41.5
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 2.1e-14 82.8 94 57.4
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 2.7e-14 82.4 106 53.8
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 2.7e-14 82.4 126 53.2
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 4.6e-14 81.6 78 62.8
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 6.0e-14 81.3 75 64.0
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 6.0e-14 81.3 82 59.8
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 1.3e-13 80.1 70 68.6
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 1.3e-13 80.1 125 48.0
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 2.3e-13 79.3 123 46.3
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 5.1e-13 78.2 106 51.9
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 5.1e-13 78.2 82 57.3
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.1e-12 77.0 122 51.6
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.5e-12 76.6 90 60.0
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 1.9e-12 76.3 103 49.5
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 7.3e-12 74.3 84 60.7
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 7.3e-12 74.3 116 45.7
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 9.5e-12 73.9 69 66.7
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 9.5e-12 73.9 89 57.3
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 1.6e-11 73.2 95 52.6
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 1.6e-11 73.2 100 53.0
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 6.2e-11 71.2 82 57.3
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 6.2e-11 71.2 102 45.1
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 1.8e-10 69.7 99 50.5
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 2.3e-10 69.3 57 75.4
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 2.3e-10 69.3 83 50.6
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 2.3e-10 69.3 70 62.9
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 8.9e-10 67.4 107 45.8
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 8.9e-10 67.4 107 45.8
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 8.9e-10 67.4 107 46.7
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 8.9e-10 67.4 122 43.4
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 1.2e-09 67.0 123 42.3
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 1.5e-09 66.6 69 62.3
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 4.4e-09 65.1 76 59.2
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 7.5e-09 64.3 107 44.9
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.7e-06 55.8 128 39.8
Haze_02941 Corylus avellana HOM05D008143 ORTHO05D010256 3.5e-06 55.5 52 57.7


User provided reference genes

Program Settings