Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43963 Davidia involucrata HOM05D008698 ORTHO05D010072 7.8e-40 167.9 200 100.0
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 1.7e-23 113.6 207 71.0
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 7.5e-19 98.2 205 59.5
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 3.7e-18 95.9 208 69.7
CiPaw.02G047000 Carya illinoinensis HOM05D008698 ORTHO05D010072 4.1e-17 92.4 205 80.5
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 1.6e-16 90.5 208 73.6
GSVIVG01019304001 Vitis vinifera HOM05D008698 ORTHO05D010072 8.6e-15 84.7 208 64.9
Actinidia31735 Actinidia chinensis HOM05D008698 ORTHO05D010072 1.9e-14 83.6 182 81.9
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 2.1e-13 80.1 200 67.0
Duzib128G0528 Durio zibethinus HOM05D008698 ORTHO05D010072 6.2e-13 78.6 209 68.4
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 6.8e-12 75.1 199 64.8
Oeu054159.1 Olea europaea HOM05D008698 ORTHO05D010072 1.5e-11 73.9 208 67.3
Sed0010525 Sechium edule HOM05D023437 ORTHO05D010072 1.3e-10 70.9 70 61.4
Eucgr.L01353 Eucalyptus grandis HOM05D008698 ORTHO05D010072 3.8e-10 69.3 77 64.9
Thecc.05G234300 Theobroma cacao HOM05D008698 ORTHO05D010072 3.8e-10 69.3 205 60.5
Eucgr.D01072 Eucalyptus grandis HOM05D008698 ORTHO05D010072 6.4e-10 68.6 77 63.6
Actinidia20018 Actinidia chinensis HOM05D020756 ORTHO05D010072 8.4e-10 68.2 75 70.7
ClCG05G002490 Citrullus lanatus HOM05D023437 ORTHO05D010072 1.9e-09 67.0 215 51.2
Cc05_g03920 Coffea canephora HOM05D008698 ORTHO05D010072 7.1e-09 65.1 195 69.7
QL04p053348 Quercus lobata HOM05D008698 ORTHO05D010072 7.1e-09 65.1 204 69.1
Nn1g09349 Nelumbo nucifera HOM05D016621 ORTHO05D010071 1.2e-08 64.3 209 54.5
Nn3g19109 Nelumbo nucifera HOM05D016621 ORTHO05D010071 1.2e-08 64.3 218 56.0
Prupe.2G106300 Prunus persica HOM05D008698 ORTHO05D010072 1.6e-08 63.9 211 60.7
Sc23g0004570 Simmondsia chinensis HOM05D008698 ORTHO05D010072 3.5e-08 62.8 195 59.0
Glyma.07G122400 Glycine max HOM05D015382 ORTHO05D019009 4.6e-08 62.4 79 57.0
CANSAT25G0609 Cannabis sativa HOM05D015382 ORTHO05D010072 7.8e-08 61.6 69 71.0
Manes.08G156500 Manihot esculenta HOM05D008698 ORTHO05D010072 7.8e-08 61.6 203 63.5
Potri.013G070900 Populus trichocarpa HOM05D008698 ORTHO05D010072 7.8e-08 61.6 156 67.3
Atru.chr2.1638 Acer truncatum HOM05D008698 ORTHO05D021066 2.3e-07 60.1 206 59.2
MELO3C006213.2 Cucumis melo HOM05D023437 ORTHO05D010072 8.7e-07 58.2 78 47.4
Duzib177G0681 Durio zibethinus HOM05D008698 ORTHO05D010072 8.7e-07 58.2 32 81.2
Medtr8g009720 Medicago truncatula HOM05D015382 ORTHO05D019009 1.1e-06 57.8 187 58.3
Hma1.2p1_0353F.1_g133170 Hydrangea macrophylla HOM05D008698 ORTHO05D010072 1.5e-06 57.4 198 63.1
Actinidia32790 Actinidia chinensis HOM05D016621 ORTHO05D010071 1.9e-06 57.0 100 46.0
Ah.05g177120 Amaranthus hybridus HOM05D008698 ORTHO05D010072 1.9e-06 57.0 67 55.2
HanXRQChr04g0117701 Helianthus annuus HOM05D018323 ORTHO05D010072 2.5e-06 56.6 85 58.8
HanXRQChr07g0198711 Helianthus annuus HOM05D013051 ORTHO05D010071 4.3e-06 55.8 92 50.0
Cfa003696 Carpinus fangiana HOM05D008698 ORTHO05D010072 5.6e-06 55.5 215 60.9
ECA236G5065 Erigeron canadensis HOM05D018323 ORTHO05D010072 5.6e-06 55.5 89 55.1
MD02G1232500 Malus domestica HOM05D018025 ORTHO05D020667 5.6e-06 55.5 212 63.2
Actinidia01252 Actinidia chinensis HOM05D016621 ORTHO05D010071 7.3e-06 55.1 92 50.0
Gohir.D11G236900 Gossypium hirsutum HOM05D008698 ORTHO05D010072 7.3e-06 55.1 36 77.8
Gorai.007G250000 Gossypium raimondii HOM05D008698 ORTHO05D010072 7.3e-06 55.1 36 77.8
TAR375G0911 Trochodendron aralioides HOM05D008698 ORTHO05D010072 7.3e-06 55.1 59 69.5
Duzib177G0795 Durio zibethinus HOM05D008698 ORTHO05D010072 9.6e-06 54.7 172 68.0


User provided reference genes

Program Settings