Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43946 Davidia involucrata HOM05D008109 ORTHO05D009894 1.1e-72 276.6 142 100.0
Dinv43505 Davidia involucrata HOM05D008109 ORTHO05D009894 3.5e-26 122.1 107 69.2
Hma1.2p1_0541F.1_g174770 Hydrangea macrophylla HOM05D008109 ORTHO05D009894 6.5e-25 117.9 154 51.9
vmacro22469 Vaccinium macrocarpon HOM05D008109 ORTHO05D009894 6.5e-25 117.9 147 56.5
Haze_03277 Corylus avellana HOM05D008109 ORTHO05D009894 8.0e-23 110.9 144 52.1
Cfa010699 Carpinus fangiana HOM05D008109 ORTHO05D009894 4.0e-22 108.6 144 50.0
Medtr2g062280 Medicago truncatula HOM05D008109 ORTHO05D009894 6.8e-22 107.8 148 47.3
CiPaw.13G000700 Carya illinoinensis HOM05D008109 ORTHO05D009894 1.5e-21 106.7 150 47.3
Lsat_1_v5_gn_1_89920 Lactuca sativa HOM05D008109 ORTHO05D009894 2.0e-21 106.3 133 48.9
Nn7g35907 Nelumbo nucifera HOM05D008109 ORTHO05D009894 2.6e-21 105.9 169 46.2
Duzib235G0400 Durio zibethinus HOM05D008109 ORTHO05D009894 4.4e-21 105.1 146 49.3
TPR.G10815 Trifolium pratense HOM05D008109 ORTHO05D009894 7.5e-21 104.4 142 48.6
QL04p002011 Quercus lobata HOM05D008109 ORTHO05D009894 6.3e-20 101.3 148 49.3
Thecc.06G002700 Theobroma cacao HOM05D008109 ORTHO05D009894 1.1e-19 100.5 160 43.1
Lalb_Chr25g0283751 Lupinus albus HOM05D008109 ORTHO05D009894 3.1e-19 99.0 149 45.0
Cc02_g26780 Coffea canephora HOM05D008109 ORTHO05D009894 7.0e-19 97.8 135 48.1
Cc02_g26790 Coffea canephora HOM05D008109 ORTHO05D009894 7.0e-19 97.8 150 44.7
Phvul.005G042700 Phaseolus vulgaris HOM05D008109 ORTHO05D009894 1.2e-18 97.1 154 46.8
TWI09G0246 Tripterygium wilfordii HOM05D008109 ORTHO05D009894 1.6e-18 96.7 133 48.9
Gorai.010G246800 Gossypium raimondii HOM05D008109 ORTHO05D009894 2.7e-18 95.9 153 43.8
Gohir.D06G219700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 3.5e-18 95.5 156 44.9
Gohir.A05G110700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 5.9e-18 94.7 144 43.8
Ciclev10032944m.g Citrus clementina HOM05D008109 ORTHO05D009894 1.0e-17 94.0 164 44.5
Nn2g15812 Nelumbo nucifera HOM05D008109 ORTHO05D009894 1.0e-17 94.0 183 41.5
Gohir.A06G202200 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.3e-17 93.6 156 44.9
Duzib192G0509 Durio zibethinus HOM05D008109 ORTHO05D009894 1.7e-17 93.2 152 48.7
VMungo1080G1374 Vigna mungo HOM05D008109 ORTHO05D009894 1.1e-16 90.5 153 43.1
Nitab4.5_0004375g0040 Nicotiana tabacum HOM05D008109 ORTHO05D009894 1.5e-16 90.1 150 45.3
Atru.chr11.2715 Acer truncatum HOM05D008109 ORTHO05D009894 3.3e-16 89.0 178 40.4
MSTRG.28106 Avicennia marina HOM05D008109 ORTHO05D009894 3.3e-16 89.0 136 44.9
Aqoxy1G00435 Aquilegia oxysepala HOM05D008109 ORTHO05D009894 7.2e-16 87.8 170 39.4
PGSC0003DMG400015658 Solanum tuberosum HOM05D008109 ORTHO05D009894 7.2e-16 87.8 121 50.4
Oeu032778.1 Olea europaea HOM05D008109 ORTHO05D009894 2.8e-15 85.9 135 43.7
Gorai.009G115400 Gossypium raimondii HOM05D008109 ORTHO05D009894 3.6e-15 85.5 144 42.4
Lj3g0014063 Lotus japonicus HOM05D008109 ORTHO05D009894 3.6e-15 85.5 171 40.4
Potri.001G232200 Populus trichocarpa HOM05D008109 ORTHO05D009894 6.1e-15 84.7 179 39.7
Gohir.D05G111100 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.0e-14 84.0 144 42.4
Glyma.08G158700 Glycine max HOM05D008109 ORTHO05D009894 1.4e-14 83.6 188 36.2
Solyc06g051220.1 Solanum lycopersicum HOM05D008109 ORTHO05D009894 1.8e-14 83.2 125 49.6
Manes.10G153100 Manihot esculenta HOM05D011216 ORTHO05D009894 2.3e-14 82.8 161 42.2
ClCG09G003640 Citrullus lanatus HOM05D008109 ORTHO05D009894 3.0e-14 82.4 149 43.0
Prupe.2G001600 Prunus persica HOM05D008109 ORTHO05D009894 5.2e-14 81.6 167 40.1
Sabra16G0138900 Salix brachista HOM05D008109 ORTHO05D009894 6.8e-14 81.3 176 38.1
Peaxi162Scf01343g00014 Petunia axillaris HOM05D008109 ORTHO05D009894 1.5e-13 80.1 81 54.3
MELO3C023500.2 Cucumis melo HOM05D008109 ORTHO05D009894 2.0e-13 79.7 145 42.1
CsaV3_7G031540 Cucumis sativus L. HOM05D008109 ORTHO05D009894 3.4e-13 79.0 131 44.3
Oeu024942.1 Olea europaea HOM05D008109 ORTHO05D009894 4.4e-13 78.6 142 40.8
TAR623G1474 Trochodendron aralioides HOM05D008109 ORTHO05D009894 4.4e-13 78.6 243 32.9
Nitab4.5_0000266g0110 Nicotiana tabacum HOM05D008109 ORTHO05D009894 5.7e-13 78.2 130 49.2
THA.LOC104815879 Tarenaya hassleriana HOM05D011216 ORTHO05D009894 5.7e-13 78.2 166 36.7
CAN.G103.18 Capsicum annuum HOM05D008109 ORTHO05D009894 7.5e-13 77.8 126 45.2
PGR031G1804 Punica granatum HOM05D008109 ORTHO05D009894 7.5e-13 77.8 166 41.0
ECA248G0816 Erigeron canadensis HOM05D008109 ORTHO05D009894 2.2e-12 76.3 139 43.2
AUR62012433 Chenopodium quinoa HOM05D008109 ORTHO05D009894 2.8e-12 75.9 152 38.2
Potri.009G024700 Populus trichocarpa HOM05D008109 ORTHO05D009894 3.7e-12 75.5 188 36.7
DCAR_029584 Daucus carota HOM05D008109 ORTHO05D009894 6.3e-12 74.7 147 40.1
MBI01_g20511_MAGBIO Magnolia biondii HOM05D011216 ORTHO05D009894 8.3e-12 74.3 151 39.1
AUR62031557 Chenopodium quinoa HOM05D008109 ORTHO05D009894 1.4e-11 73.6 152 36.8
Glyma.15G267600 Glycine max HOM05D008109 ORTHO05D009894 1.8e-11 73.2 143 40.6
Sed0011083 Sechium edule HOM05D008109 ORTHO05D009894 1.8e-11 73.2 159 42.1
Eucgr.I02808 Eucalyptus grandis HOM05D008109 ORTHO05D009894 3.1e-11 72.4 158 41.1
Sed0022406 Sechium edule HOM05D008109 ORTHO05D009894 9.2e-11 70.9 142 40.8
AL80U10010 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 4.5e-10 68.6 146 39.0
AL4G27230 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 7.8e-10 67.8 146 39.0
COL.COLO4_26840 Corchorus olitorius HOM05D004088 ORTHO05D004736 7.8e-10 67.8 120 41.7
Rhsim07G0049100 Rhododendron simsii HOM05D008109 ORTHO05D009894 1.3e-09 67.0 157 40.1
Carub.0004s1323 Capsella rubella HOM05D011216 ORTHO05D009894 6.6e-09 64.7 150 38.0
Sc06g0000510 Simmondsia chinensis HOM05D008109 ORTHO05D009894 6.6e-09 64.7 148 37.8
A05p13660 Brassica napus HOM05D011216 ORTHO05D009894 8.6e-09 64.3 131 38.9
BraA05t20304Z Brassica rapa HOM05D011216 ORTHO05D009894 8.6e-09 64.3 131 38.9
Sp4g14290 Schrenkiella parvula HOM05D011216 ORTHO05D009894 8.6e-09 64.3 144 38.2
AT2G31930 Arabidopsis thaliana HOM05D011216 ORTHO05D009894 1.1e-08 63.9 147 38.1
C04p17830 Brassica napus HOM05D011216 ORTHO05D009894 9.5e-08 60.8 131 37.4
BolC4t23331H Brassica oleracea HOM05D011216 ORTHO05D009894 9.5e-08 60.8 131 37.4
Thhalv10017383m.g Eutrema salsugineum HOM05D011216 ORTHO05D009894 9.5e-08 60.8 147 38.8
Aqoxy2G00464 Aquilegia oxysepala HOM05D008109 ORTHO05D009894 6.1e-07 58.2 123 39.0
Nitab4.5_0003123g0020 Nicotiana tabacum HOM05D008109 ORTHO05D009894 6.1e-07 58.2 101 46.5
Ah.16g104750 Amaranthus hybridus HOM05D008109 ORTHO05D009894 1.8e-06 56.6 130 35.4
SGA_v2.0_scaffold95G28763 Striga asiatica HOM05D008109 ORTHO05D009894 2.3e-06 56.2 144 34.0


User provided reference genes

Program Settings