Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 6.4e-52 207.2 111 100.0
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.8e-36 154.8 134 70.1
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.9e-36 154.5 134 70.1
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 6.4e-36 154.1 138 68.1
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.5e-34 148.3 139 66.9
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.0e-33 146.7 134 66.4
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.0e-33 146.7 137 65.7
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 1.3e-33 146.4 134 67.2
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.3e-33 146.4 131 66.4
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.1e-33 144.4 126 69.8
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.1e-32 143.3 131 64.9
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.5e-32 142.9 131 65.6
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.9e-32 142.5 131 63.4
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.5e-32 142.1 131 65.6
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 5.6e-32 141.0 132 65.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 5.6e-32 141.0 132 65.9
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 7.4e-32 140.6 131 64.9
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.6e-31 139.4 132 62.9
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.6e-31 139.4 133 63.2
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 2.1e-31 139.0 124 67.7
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 2.8e-31 138.7 134 64.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 2.8e-31 138.7 133 66.2
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 3.7e-31 138.3 132 63.6
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 6.2e-31 137.5 123 68.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.1e-30 136.7 133 63.9
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.4e-30 136.3 138 58.7
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 1.8e-30 136.0 132 62.9
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.4e-30 135.6 124 65.3
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 3.1e-30 135.2 134 62.7
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.1e-30 135.2 129 65.1
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 5.3e-30 134.4 132 62.1
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 5.3e-30 134.4 131 64.9
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 9.0e-30 133.7 137 59.1
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 9.0e-30 133.7 137 59.1
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.2e-29 133.3 138 58.0
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 2.0e-29 132.5 128 62.5
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.6e-29 132.1 132 64.4
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 2.6e-29 132.1 132 64.4
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 3.4e-29 131.7 135 58.5
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 4.5e-29 131.3 126 62.7
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 4.5e-29 131.3 133 63.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 4.5e-29 131.3 132 62.9
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 7.6e-29 130.6 122 67.2
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 9.9e-29 130.2 122 63.9
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.3e-28 129.8 142 58.5
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.7e-28 129.4 126 63.5
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.7e-28 129.4 124 62.1
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.7e-28 129.4 123 62.6
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 2.2e-28 129.0 134 59.7
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 2.9e-28 128.6 132 60.6
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.9e-28 128.6 134 60.4
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 4.9e-28 127.9 124 60.5
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.1e-27 126.7 118 62.7
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.4e-27 126.3 120 63.3
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.4e-27 126.3 135 58.5
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.9e-27 125.9 124 61.3
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.9e-27 125.9 134 59.7
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.4e-27 125.6 108 70.4
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 9.3e-27 123.6 127 60.6
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.2e-26 123.2 115 63.5
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.2e-26 123.2 157 54.1
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.6e-26 122.9 113 67.3
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.6e-26 122.9 112 67.9
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.6e-26 122.9 132 59.1
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.1e-26 122.5 119 62.2
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 2.1e-26 122.5 129 59.7
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.7e-26 122.1 108 69.4
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 3.5e-26 121.7 122 61.5
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 4.6e-26 121.3 124 61.3
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 6.0e-26 120.9 121 61.2
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.0e-26 120.9 115 62.6
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 6.0e-26 120.9 121 61.2
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.3e-25 119.8 74 82.4
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 2.3e-25 119.0 122 60.7
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 2.3e-25 119.0 118 61.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 2.3e-25 119.0 122 60.7
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 2.3e-25 119.0 122 60.7
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 2.3e-25 119.0 118 61.9
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 3.0e-25 118.6 121 59.5
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 5.1e-25 117.9 120 60.0
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 6.7e-25 117.5 123 61.8
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.9e-24 115.9 109 61.5
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 9.6e-24 113.6 112 62.5
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 9.6e-24 113.6 144 50.7
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 1.3e-23 113.2 115 59.1
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 2.1e-23 112.5 114 61.4
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.7e-23 111.7 109 67.9
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 4.8e-23 111.3 97 63.9
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 8.2e-23 110.5 116 58.6
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 1.4e-22 109.8 118 56.8
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 3.1e-22 108.6 122 53.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.0e-20 103.6 101 63.4
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.0e-20 103.6 75 78.7
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 1.7e-20 102.8 122 53.3
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 4.6e-18 94.7 122 48.4
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 6.0e-18 94.4 118 52.5
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.8e-17 92.8 66 69.7
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.3e-17 92.4 97 53.6
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 8.7e-17 90.5 92 57.6
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.3e-15 86.7 92 56.5
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 3.1e-14 82.0 89 59.6
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.1e-14 81.6 91 57.1
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.3e-12 76.6 111 47.7
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 2.3e-09 65.9 55 61.8
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 8.8e-09 63.9 52 65.4
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 2.8e-07 58.9 45 71.1
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.7e-07 58.5 103 36.9
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-06 55.8 108 35.2


User provided reference genes

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