Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 0.0e+00 1075.1 517 100.0
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.4e-249 864.8 524 82.1
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 6.7e-245 850.5 531 79.5
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 7.7e-241 837.0 459 86.3
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.7e-240 835.9 524 79.6
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.4e-239 832.8 541 76.9
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 3.0e-237 825.1 510 79.2
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 3.7e-235 818.1 516 77.3
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 8.2e-235 817.0 520 77.9
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 2.2e-232 808.9 459 83.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.0e-232 807.7 502 80.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 4.2e-231 804.7 457 83.2
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.2e-231 804.7 452 83.4
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 7.2e-231 803.9 498 78.1
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 1.2e-230 803.1 512 76.6
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.6e-230 802.7 510 76.3
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.6e-230 802.7 510 78.2
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 3.6e-230 801.6 517 75.0
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 8.0e-230 800.4 510 76.3
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 5.2e-229 797.7 467 81.4
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 4.4e-228 794.7 508 77.2
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 7.5e-228 793.9 513 75.6
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 1.7e-227 792.7 516 75.4
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.7e-227 791.6 520 75.6
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 6.3e-227 790.8 476 79.2
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 8.2e-227 790.4 520 75.4
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 1.1e-226 790.0 515 75.3
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 2.4e-226 788.9 452 83.4
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 4.1e-226 788.1 505 75.4
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.2e-225 786.6 516 75.2
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.6e-225 786.2 471 79.2
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 4.5e-225 784.6 455 81.5
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.0e-224 783.5 472 77.5
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.3e-224 783.1 507 74.0
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 1.3e-224 783.1 513 74.3
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 1.7e-224 782.7 474 78.7
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 2.2e-224 782.3 486 76.1
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 2.2e-224 782.3 466 79.2
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 8.5e-224 780.4 520 73.3
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 8.5e-224 780.4 521 73.5
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.9e-223 779.2 510 74.7
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 2.5e-223 778.9 451 79.8
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 5.5e-223 777.7 500 75.0
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 3.6e-222 775.0 511 73.6
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 4.7e-222 774.6 514 74.9
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.0e-221 773.5 483 76.4
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 3.0e-221 771.9 487 74.7
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 3.0e-221 771.9 503 74.4
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 4.0e-221 771.5 546 72.0
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.0e-221 771.5 549 71.0
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 5.2e-221 771.2 533 72.6
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 3.4e-220 768.5 519 72.3
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.4e-220 768.1 488 76.6
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 7.5e-220 767.3 452 79.6
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 9.8e-220 766.9 499 73.1
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.3e-219 766.5 478 75.3
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 8.3e-219 763.8 462 78.8
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 8.3e-219 763.8 455 78.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.2e-217 760.0 513 71.7
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.3e-216 756.5 497 73.2
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 1.7e-216 756.1 500 72.8
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.2e-216 755.7 478 74.3
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 6.5e-216 754.2 521 70.1
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 8.5e-216 753.8 524 70.0
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.5e-215 753.1 452 77.2
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.5e-215 753.1 493 73.0
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 1.9e-215 752.7 493 72.8
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 3.2e-215 751.9 481 74.0
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 4.2e-215 751.5 493 72.6
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 5.5e-215 751.1 493 72.8
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 9.5e-215 750.4 466 74.9
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 1.2e-214 750.0 452 77.9
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 2.8e-214 748.8 497 72.0
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 3.6e-214 748.4 493 72.2
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 4.7e-214 748.0 490 71.8
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 1.0e-213 746.9 452 77.0
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 4.0e-213 745.0 481 73.4
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 4.0e-213 745.0 452 77.2
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.2e-213 744.6 465 77.4
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 1.5e-212 743.0 514 71.4
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 4.4e-212 741.5 486 72.6
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 9.8e-212 740.3 486 72.6
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 9.8e-212 740.3 450 77.3
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.7e-211 739.6 452 77.0
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 3.7e-211 738.4 465 73.3
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 3.1e-210 735.3 440 77.3
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.7e-208 729.6 453 74.0
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 3.3e-207 725.3 462 75.1
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 9.5e-207 723.8 500 70.0
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 6.8e-205 717.6 515 67.4
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 2.7e-193 679.1 457 72.0
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.2e-190 670.2 434 73.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 1.6e-185 653.3 464 68.3
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 3.9e-184 648.7 449 65.5
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 5.1e-184 648.3 495 64.6
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 3.6e-182 642.1 466 68.7
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 4.9e-179 631.7 456 64.9
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 3.5e-177 625.5 474 64.1
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.3e-176 623.6 366 81.1
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.5e-175 620.2 451 63.9
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 5.6e-175 618.2 427 71.0
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.6e-172 609.4 508 60.8
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.4e-165 586.3 417 69.8
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 4.6e-145 518.8 371 70.9
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.5e-140 503.8 477 57.2
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.0e-128 464.5 450 51.1
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.2e-124 451.1 316 71.2
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 2.6e-116 423.3 471 48.2
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 2.5e-106 390.2 315 62.9
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 4.8e-102 375.9 476 45.2
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.5e-82 311.2 451 40.4
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 2.7e-44 184.1 226 42.5
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.5e-42 177.6 100 82.0
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.4e-37 161.8 96 80.2
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.4e-37 161.8 96 80.2
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.4e-37 161.8 96 80.2
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.4e-37 161.8 96 80.2
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 2.2e-30 137.9 280 33.9
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 5.3e-24 116.7 87 60.9
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.7e-17 95.1 72 61.1
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 6.1e-12 76.6 116 41.4
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 1.8e-11 75.1 43 83.7
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.5e-07 62.0 41 78.0
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 3.5e-07 60.8 40 65.0
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.9e-06 57.8 118 33.1


User provided reference genes

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