Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 1.4e-134 483.0 250 100.0
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 1.0e-60 237.7 274 52.9
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 2.9e-60 236.1 218 64.7
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 1.0e-52 211.1 291 47.1
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 4.2e-51 205.7 258 50.8
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 1.2e-50 204.1 282 47.9
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 3.9e-49 199.1 288 49.0
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 3.9e-49 199.1 275 48.7
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 5.1e-49 198.7 289 47.1
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 2.8e-47 193.0 306 44.1
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 1.4e-46 190.7 312 44.9
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 1.4e-46 190.7 283 47.3
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 1.2e-45 187.6 210 48.1
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 3.4e-45 186.0 308 45.8
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 7.7e-45 184.9 294 44.6
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.0e-44 184.5 307 45.6
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 1.4e-43 180.6 290 46.6
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 2.5e-43 179.9 307 42.7
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 9.4e-43 177.9 304 44.7
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.6e-42 177.2 291 44.0
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 3.6e-42 176.0 290 40.7
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 6.1e-42 175.3 275 42.9
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 2.3e-41 173.3 299 45.5
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 3.0e-41 172.9 228 43.9
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.9e-41 172.6 297 43.4
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 6.7e-41 171.8 303 42.2
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.1e-40 171.0 317 41.6
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 1.5e-40 170.6 295 40.3
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 2.8e-39 166.4 300 41.7
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 8.2e-39 164.9 287 39.0
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.4e-38 163.3 322 38.5
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 5.3e-38 162.2 299 39.1
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 3.4e-37 159.5 321 41.7
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 4.5e-37 159.1 297 39.7
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.9e-36 156.4 278 42.8
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 5.0e-36 155.6 324 37.3
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 1.6e-34 150.6 304 43.4
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 1.4e-33 147.5 289 38.8
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 1.8e-33 147.1 294 38.1
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-33 147.1 293 37.9
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-33 147.1 290 37.9
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 3.0e-33 146.4 324 37.3
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.9e-33 146.0 290 37.6
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 5.2e-33 145.6 311 37.6
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.7e-32 141.4 280 35.7
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 3.7e-31 139.4 308 40.9
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 3.7e-31 139.4 292 39.0
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.4e-30 137.5 262 41.6
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 2.4e-30 136.7 304 39.5
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 4.1e-30 136.0 291 38.8
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 5.3e-30 135.6 299 38.8
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 2.0e-29 133.7 263 41.8
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.5e-29 132.9 302 39.4
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.5e-29 132.5 293 39.2
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 4.5e-29 132.5 304 35.9
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 4.5e-29 132.5 234 39.7
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 7.7e-29 131.7 291 35.1
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.7e-29 131.7 291 35.1
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.7e-28 130.6 298 37.9
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.7e-28 130.6 290 39.0
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 2.9e-28 129.8 313 34.5
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 2.9e-28 129.8 322 36.0
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 5.0e-28 129.0 265 39.2
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 5.0e-28 129.0 280 41.1
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 5.0e-28 129.0 303 36.0
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 1.5e-27 127.5 316 34.5
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 2.5e-27 126.7 308 36.4
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 7.2e-27 125.2 268 41.8
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 1.2e-26 124.4 268 38.8
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 1.6e-26 124.0 347 34.0
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 3.6e-26 122.9 295 38.6
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 3.6e-26 122.9 309 37.9
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 4.7e-26 122.5 316 35.1
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 6.1e-26 122.1 288 37.2
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 1.4e-25 120.9 276 37.7
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.3e-25 120.2 337 35.6
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 2.3e-25 120.2 282 38.7
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 4.0e-25 119.4 279 40.5
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 6.7e-25 118.6 290 40.0
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 5.7e-24 115.5 317 36.0
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 2.2e-23 113.6 309 36.9
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 3.7e-23 112.8 286 38.8
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 1.8e-22 110.5 293 37.2
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 2.7e-21 106.7 307 36.2
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 4.5e-21 105.9 317 34.1
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 1.0e-20 104.8 267 39.0
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 3.8e-20 102.8 311 30.9
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 5.0e-20 102.4 240 35.8
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 6.5e-20 102.1 323 31.9
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 1.1e-19 101.3 281 36.3
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.5e-19 100.9 280 30.7
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 7.2e-19 98.6 235 32.8
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 1.6e-18 97.4 306 32.4
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 3.6e-18 96.3 194 36.6
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 8.8e-17 91.7 175 40.6
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 2.6e-16 90.1 260 33.5
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 3.4e-16 89.7 288 33.3
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.4e-16 89.7 189 39.2
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 1.3e-15 87.8 179 35.2
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 2.8e-15 86.7 283 32.9
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.1e-14 84.7 177 33.9
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 2.4e-14 83.6 272 33.1
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 4.1e-14 82.8 297 33.7
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 5.4e-14 82.4 117 48.7
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.1e-14 81.6 284 28.5
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 1.2e-13 81.3 146 33.6
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.6e-13 80.9 284 28.2
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 2.0e-13 80.5 284 27.5
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 3.5e-13 79.7 312 31.7
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 4.5e-13 79.3 274 35.0
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.5e-13 79.3 283 27.2
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 7.7e-13 78.6 266 33.5
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 1.0e-12 78.2 312 29.2
Solyc03g095830.3 Solanum lycopersicum HOM05D064734 ORTHO05D005694 2.9e-12 76.6 229 31.0
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 3.8e-12 76.3 224 31.7
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 8.6e-12 75.1 310 29.7
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 8.6e-12 75.1 294 30.6
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.5e-11 74.3 283 32.9
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 2.5e-11 73.6 188 32.4
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 3.2e-11 73.2 249 31.7
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 7.2e-11 72.0 313 28.1
THA.LOC104801575 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 7.2e-11 72.0 99 46.5
BcaC04g24184 Brassica carinata HOM05D012121 ORTHO05D005694 2.8e-10 70.1 306 27.8
BolC9t52962H Brassica oleracea HOM05D012121 ORTHO05D005694 2.8e-10 70.1 306 27.8
Zm00001eb047010 Zea mays HOM05D024295 ORTHO05D020951 2.8e-10 70.1 146 34.9
CAN.G342.1 Capsicum annuum HOM05D006343 ORTHO05D005694 8.0e-10 68.6 174 35.1
Zm00001eb222450 Zea mays HOM05D024295 ORTHO05D020951 1.0e-09 68.2 191 28.8
HPP92_025479 Vanilla planifolia HOM05D049984 ORTHO05D020951 1.4e-09 67.8 253 31.2
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 3.0e-09 66.6 308 27.3
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 3.0e-09 66.6 306 28.1
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 3.0e-09 66.6 211 29.9
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 6.8e-09 65.5 261 30.3
CAN.G526.2 Capsicum annuum HOM05D006343 ORTHO05D005694 2.0e-08 63.9 177 35.6
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 2.0e-08 63.9 172 29.7
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 2.6e-08 63.5 285 31.6
PSO782G0031 Papaver somniferum HOM05D020029 ORTHO05D005694 2.6e-08 63.5 212 28.3
Sc01g0003560 Simmondsia chinensis HOM05D006343 ORTHO05D005694 3.4e-08 63.2 181 35.9
Gorai.004G159200 Gossypium raimondii HOM05D006343 ORTHO05D005694 1.7e-07 60.8 273 31.5
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.7e-07 59.7 76 48.7
Gohir.A08G131933 Gossypium hirsutum HOM05D006343 ORTHO05D005694 3.7e-07 59.7 87 42.5
Sabra14G0073200 Salix brachista HOM05D006343 ORTHO05D005694 3.1e-06 56.6 217 29.0
BraA09t35701Z Brassica rapa HOM05D012121 ORTHO05D005694 9.2e-06 55.1 312 26.9


User provided reference genes

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