Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43805 Davidia involucrata HOM05D005367 ORTHO05D006328 1.6e-113 412.9 225 100.0
Hma1.2p1_0001F.1_g001380 Hydrangea macrophylla HOM05D005367 ORTHO05D006328 5.1e-64 248.4 229 64.6
CSS0033809 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.4e-53 213.8 174 66.1
Haze_15487 Corylus avellana HOM05D005367 ORTHO05D006328 1.8e-53 213.4 231 57.6
Cfa003939 Carpinus fangiana HOM05D005367 ORTHO05D006328 2.6e-52 209.5 235 56.2
GSVIVG01026893001 Vitis vinifera HOM05D005367 ORTHO05D006328 4.9e-51 205.3 164 62.8
Prupe.2G167900 Prunus persica HOM05D005367 ORTHO05D006328 1.1e-50 204.1 218 51.4
CSS0040093 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 5.5e-50 201.8 226 56.2
Ciclev10021865m.g Citrus clementina HOM05D005367 ORTHO05D006328 5.5e-50 201.8 225 50.7
Actinidia20916 Actinidia chinensis HOM05D005367 ORTHO05D006328 4.6e-49 198.7 174 62.1
Nn1g01501 Nelumbo nucifera HOM05D005367 ORTHO05D006328 7.9e-49 198.0 194 53.6
Cpa.g.sc18.245 Carica papaya HOM05D005367 ORTHO05D006328 1.1e-47 194.1 226 50.9
TAR375G0799 Trochodendron aralioides HOM05D005367 ORTHO05D006328 1.9e-47 193.4 172 61.0
vmacro13291 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 9.6e-47 191.0 175 56.6
Lj9A582T87 Lonicera japonica HOM05D005367 ORTHO05D006328 2.1e-46 189.9 172 54.1
CiPaw.02G029900 Carya illinoinensis HOM05D005367 ORTHO05D006328 4.8e-46 188.7 232 52.2
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 1.8e-45 186.8 201 56.7
Nitab4.5_0001702g0150 Nicotiana tabacum HOM05D005367 ORTHO05D006328 4.0e-45 185.7 174 56.9
TWI14G0016 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 5.3e-45 185.3 198 51.5
MD07G1139200 Malus domestica HOM05D005367 ORTHO05D006328 9.0e-45 184.5 218 49.1
MD01G1057500 Malus domestica HOM05D005367 ORTHO05D006328 2.0e-44 183.3 219 48.9
TWI59G0064 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 2.6e-44 183.0 173 53.2
QL08p049031 Quercus lobata HOM05D005367 ORTHO05D006328 7.6e-44 181.4 178 53.9
Cc02_g37850 Coffea canephora HOM05D005367 ORTHO05D006328 2.2e-43 179.9 195 53.8
Gohir.D08G152300 Gossypium hirsutum HOM05D005367 ORTHO05D006328 8.4e-43 177.9 190 51.6
Gorai.004G158200 Gossypium raimondii HOM05D005367 ORTHO05D006328 3.2e-42 176.0 190 50.5
COL.COLO4_12698 Corchorus olitorius HOM05D005367 ORTHO05D006328 7.1e-42 174.9 223 52.0
Peaxi162Scf00191g01425 Petunia axillaris HOM05D005367 ORTHO05D006328 1.2e-41 174.1 171 56.1
Duzib133G0249 Durio zibethinus HOM05D005367 ORTHO05D006328 2.1e-41 173.3 168 57.1
Thecc.01G360700 Theobroma cacao HOM05D005367 ORTHO05D006328 3.5e-41 172.6 165 55.8
Nitab4.5_0008050g0010 Nicotiana tabacum HOM05D005367 ORTHO05D006328 7.9e-41 171.4 172 54.1
Gorai.007G098700 Gossypium raimondii HOM05D005367 ORTHO05D006328 1.0e-40 171.0 222 52.7
RcHm_v2.0_Chr1g0355051 Rosa chinensis HOM05D005367 ORTHO05D006328 1.0e-40 171.0 181 50.3
Potri.014G082600 Populus trichocarpa HOM05D005367 ORTHO05D006328 1.8e-40 170.2 177 52.5
Gohir.A11G088100 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.3e-40 169.9 168 56.5
Sopen05g028210 Solanum pennellii HOM05D005367 ORTHO05D006328 2.3e-40 169.9 199 51.8
Gohir.D11G092400 Gossypium hirsutum HOM05D005367 ORTHO05D006328 3.0e-40 169.5 222 52.7
Sc01g0003360 Simmondsia chinensis HOM05D005367 ORTHO05D006328 3.0e-40 169.5 175 51.4
Solyc05g049880.3 Solanum lycopersicum HOM05D005367 ORTHO05D006328 3.9e-40 169.1 199 51.8
PGSC0003DMG400021656 Solanum tuberosum HOM05D005367 ORTHO05D006328 1.1e-39 167.5 198 51.0
ClCG06G003800 Citrullus lanatus HOM05D005367 ORTHO05D006328 1.5e-39 167.2 199 51.3
Gohir.A08G130800 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.9e-39 166.8 188 50.0
Eucgr.D02282 Eucalyptus grandis HOM05D005367 ORTHO05D006328 2.5e-39 166.4 190 50.5
Lalb_Chr24g0401631 Lupinus albus HOM05D005367 ORTHO05D006328 2.5e-39 166.4 164 54.3
PGR031G3282 Punica granatum HOM05D005367 ORTHO05D006328 2.5e-39 166.4 168 53.0
Glyma.18G231900 Glycine max HOM05D005367 ORTHO05D006328 4.3e-39 165.6 174 54.0
Manes.05G036200 Manihot esculenta HOM05D005367 ORTHO05D006328 5.7e-39 165.2 180 53.3
Lalb_Chr01g0011531 Lupinus albus HOM05D005367 ORTHO05D006328 7.4e-39 164.9 164 53.7
HanXRQChr16g0522831 Helianthus annuus HOM05D005367 ORTHO05D006328 9.6e-39 164.5 178 51.1
Lsat_1_v5_gn_4_36280 Lactuca sativa HOM05D005367 ORTHO05D006328 2.8e-38 162.9 180 50.6
Nn6g33454 Nelumbo nucifera HOM05D005367 ORTHO05D006328 2.8e-38 162.9 196 48.5
Potri.002G158500 Populus trichocarpa HOM05D005367 ORTHO05D006328 3.1e-37 159.5 227 46.3
Oeu056369.1 Olea europaea HOM05D005367 ORTHO05D006328 5.3e-37 158.7 190 51.1
SGA_v2.0_scaffold11G05663 Striga asiatica HOM05D000368 ORTHO05D006328 6.9e-37 158.3 173 50.3
Atru.chr5.466 Acer truncatum HOM05D005367 ORTHO05D006328 5.9e-36 155.2 200 47.0
EL10Ac1g00429 Beta vulgaris HOM05D005367 ORTHO05D006328 5.9e-36 155.2 165 49.7
MSTRG.20826 Avicennia marina HOM05D005367 ORTHO05D006328 1.3e-35 154.1 170 48.8
Manes.01G258500 Manihot esculenta HOM05D005367 ORTHO05D006328 1.7e-35 153.7 179 49.2
MELO3C021217.2 Cucumis melo HOM05D005367 ORTHO05D006328 3.8e-35 152.5 198 47.5
FAN03G1221 Fragaria x ananassa HOM05D005367 ORTHO05D006328 5.0e-35 152.1 187 46.5
Hund16930 Selenicereus undatus HOM05D005367 ORTHO05D006328 5.0e-35 152.1 220 40.9
Migut.B01742 Erythranthe guttata HOM05D005367 ORTHO05D006328 8.4e-35 151.4 172 49.4
RcHm_v2.0_Chr1g0354801 Rosa chinensis HOM05D005367 ORTHO05D006328 1.1e-34 151.0 181 46.4
FAN10G0042 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.4e-34 150.6 187 46.0
SalBow3G2019 Salvia bowleyana HOM05D005367 ORTHO05D006328 1.4e-34 150.6 168 49.4
FAN01G2456 Fragaria x ananassa HOM05D005367 ORTHO05D006328 5.5e-34 148.7 187 45.5
THA.LOC104801446 Tarenaya hassleriana HOM05D005367 ORTHO05D006328 9.3e-34 147.9 168 47.0
PGR042G0868 Punica granatum HOM05D005367 ORTHO05D006328 1.2e-33 147.5 182 48.9
FvH4_7g14150 Fragaria vesca HOM05D005367 ORTHO05D006328 2.1e-33 146.7 187 45.5
Eucgr.E00158 Eucalyptus grandis HOM05D005367 ORTHO05D006328 2.7e-33 146.4 170 47.1
FAN06G0563 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.7e-33 146.4 187 45.5
CsaV3_6G000470 Cucumis sativus L. HOM05D005367 ORTHO05D006328 3.5e-33 146.0 193 44.6
Sed0017642 Sechium edule HOM05D005367 ORTHO05D006328 3.5e-33 146.0 172 48.3
Ca_07909_v3 Cicer arietinum L. HOM05D005367 ORTHO05D006328 3.9e-32 142.5 169 46.2
arahy.Tifrunner.gnm1.ann1.G5US7K Arachis hypogaea HOM05D005367 ORTHO05D006328 1.1e-31 141.0 174 45.4
ECA234G3275 Erigeron canadensis HOM05D005367 ORTHO05D006328 1.1e-31 141.0 165 49.1
arahy.Tifrunner.gnm1.ann1.D8DQXR Arachis hypogaea HOM05D005367 ORTHO05D006328 1.9e-31 140.2 174 44.8
CANSAT56G3377 Cannabis sativa HOM05D005367 ORTHO05D006328 1.9e-31 140.2 196 43.4
Atru.chr1.441 Acer truncatum HOM05D005367 ORTHO05D006328 2.5e-31 139.8 176 45.5
AUR62004342 Chenopodium quinoa HOM05D005367 ORTHO05D006328 5.7e-31 138.7 145 49.7
PSO782G1827 Papaver somniferum HOM05D005367 ORTHO05D006328 7.4e-31 138.3 207 44.0
Psat3g109400 Pisum sativum HOM05D005367 ORTHO05D006328 2.8e-30 136.3 167 44.9
PSO478G0766 Papaver somniferum HOM05D005367 ORTHO05D006328 8.2e-30 134.8 204 43.1
Manes.06G148200 Manihot esculenta HOM05D005367 ORTHO05D006328 1.4e-29 134.0 175 42.9
Sp1g00570 Schrenkiella parvula HOM05D005367 ORTHO05D006328 1.8e-29 133.7 175 46.3
VMungo1383G2792 Vigna mungo HOM05D005367 ORTHO05D006328 2.4e-29 133.3 170 47.6
Phvul.008G065800 Phaseolus vulgaris HOM05D005367 ORTHO05D006328 3.1e-29 132.9 162 47.5
TPR.G37815 Trifolium pratense HOM05D005367 ORTHO05D006328 3.1e-29 132.9 165 44.2
RcHm_v2.0_Chr1g0377581 Rosa chinensis HOM05D005367 ORTHO05D006328 5.3e-29 132.1 159 45.9
Medtr7g077380 Medicago truncatula HOM05D005367 ORTHO05D006328 6.9e-29 131.7 169 42.0
Lj1g0004821 Lotus japonicus HOM05D005367 ORTHO05D006328 9.0e-29 131.3 192 43.2
Atru.chr1.440 Acer truncatum HOM05D005367 ORTHO05D006328 2.0e-28 130.2 165 44.2
unitig_61.g26388 Utricularia gibba HOM05D005367 ORTHO05D006328 4.5e-28 129.0 164 45.7
Ah.05g180710 Amaranthus hybridus HOM05D005367 ORTHO05D006328 5.9e-28 128.6 184 43.5
Duzib205G1257 Durio zibethinus HOM05D005367 ORTHO05D006328 1.3e-27 127.5 169 43.2
Aqoxy7G00339 Aquilegia oxysepala HOM05D005367 ORTHO05D006328 1.7e-27 127.1 153 48.4
QL09p013904 Quercus lobata HOM05D005367 ORTHO05D006328 3.8e-27 125.9 225 37.8
FAN10G3657 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.1e-26 124.4 187 42.2
FvH4_7g29600 Fragaria vesca HOM05D005367 ORTHO05D006328 1.4e-26 124.0 191 41.4
FAN10G4254 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.9e-26 123.6 191 41.9
Ciclev10006075m.g Citrus clementina HOM05D005367 ORTHO05D006328 4.2e-26 122.5 167 40.7
Sabra14G0059900 Salix brachista HOM05D005367 ORTHO05D006328 4.2e-26 122.5 223 38.6
Carub.0001s0048 Capsella rubella HOM05D005367 ORTHO05D006328 1.0e-24 117.9 182 41.8
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.8e-24 117.1 188 37.8
BolC8t52897H Brassica oleracea HOM05D000368 ORTHO05D000289 1.8e-24 117.1 188 37.8
vmacro06668 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 3.9e-24 115.9 174 40.8
BraA09t42260Z Brassica rapa HOM05D005367 ORTHO05D006328 8.8e-24 114.8 222 33.8
COL.COLO4_14330 Corchorus olitorius HOM05D005367 ORTHO05D006328 8.8e-24 114.8 174 39.7
AT1G01730 Arabidopsis thaliana HOM05D005367 ORTHO05D006328 1.1e-23 114.4 169 41.4
Thhalv10008538m.g Eutrema salsugineum HOM05D005367 ORTHO05D006328 1.5e-23 114.0 198 36.9
VMungo1383G2823 Vigna mungo HOM05D005367 ORTHO05D006328 2.0e-23 113.6 166 39.2
AL1G10610 Arabidopsis lyrata HOM05D005367 ORTHO05D006328 7.4e-23 111.7 222 38.3
MD01G1202200 Malus domestica HOM05D005367 ORTHO05D006328 1.3e-22 110.9 159 40.3
DCAR_000242 Daucus carota HOM05D005367 ORTHO05D006328 1.4e-21 107.5 117 46.2
DCAR_010300 Daucus carota HOM05D005367 ORTHO05D006328 2.4e-21 106.7 168 39.9
Potri.015G145000 Populus trichocarpa HOM05D005367 ORTHO05D006328 1.5e-20 104.0 133 45.1
FAN10G0871 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.6e-20 103.2 137 46.0
MBI17_g24635_MAGBIO Magnolia biondii HOM05D005367 ORTHO05D006328 2.9e-19 99.8 190 32.1
Dinv35219 Davidia involucrata HOM05D005367 ORTHO05D006328 8.5e-19 98.2 150 38.0
FAN28G3009 Fragaria x ananassa HOM05D005367 ORTHO05D006328 8.5e-19 98.2 99 51.5
FAN10G3879 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.1e-18 97.8 141 44.0
FAN10G2377 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.9e-18 97.1 92 54.3
FAN03G1577 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.5e-18 96.7 141 41.8
AUR62022549 Chenopodium quinoa HOM05D005367 ORTHO05D006328 3.2e-18 96.3 114 46.5
Rhsim03G0187100 Rhododendron simsii HOM05D005367 ORTHO05D006328 2.1e-17 93.6 206 35.0
HPP92_027620 Vanilla planifolia HOM05D005367 ORTHO05D006328 3.9e-16 89.4 185 31.9
HPP92_022052 Vanilla planifolia HOM05D005367 ORTHO05D006328 5.1e-16 89.0 185 31.9
Actinidia34119 Actinidia chinensis HOM05D005367 ORTHO05D006328 1.3e-14 84.3 157 35.0
FAN06G3705 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.4e-13 80.9 191 33.5
FAN06G4288 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.4e-13 80.9 191 33.5
FAN10G1555 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.2e-12 77.8 116 38.8
Aa31LG1G11100 Aethionema arabicum HOM05D005367 ORTHO05D006328 1.6e-12 77.4 54 64.8
AUR62022543 Chenopodium quinoa HOM05D000713 ORTHO05D000547 5.9e-12 75.5 93 47.3
Os04g0556900 Oryza sativa ssp. japonica HOM05D005367 ORTHO05D006328 7.7e-12 75.1 164 31.1
Sabra02G0126000 Salix brachista HOM05D005367 ORTHO05D006328 1.3e-11 74.3 144 35.4
MD01G1056800 Malus domestica HOM05D005367 ORTHO05D006328 1.7e-11 73.9 100 42.0
Prupe.2G295600 Prunus persica HOM05D005367 ORTHO05D006328 2.5e-10 70.1 118 37.3
CSS0041755 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.0e-08 64.7 37 81.1
Aa31LG1G11110 Aethionema arabicum HOM05D005367 ORTHO05D006328 2.6e-07 60.1 117 32.5
CARHR000590 Cardamine hirsuta HOM05D005367 ORTHO05D006328 5.7e-07 58.9 121 35.5
Mapoly0101s0052 Marchantia polymorpha HOM05D019105 ORTHO05D018335 9.7e-07 58.2 62 37.1
CDE08G1175 Ceratophyllum demersum HOM05D005367 ORTHO05D006328 1.7e-06 57.4 79 36.7
Mapoly0093s0070 Marchantia polymorpha HOM05D019105 ORTHO05D018335 3.7e-06 56.2 117 29.1


User provided reference genes

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