Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.8e-187 659.1 330 100.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.2e-148 529.3 330 79.4
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.9e-148 528.9 330 79.1
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.1e-138 496.1 330 75.5
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.1e-138 496.1 330 75.5
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.6e-135 486.5 330 72.7
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 3.5e-130 468.8 342 69.0
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 4.6e-130 468.4 330 70.6
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 5.1e-129 464.9 330 69.4
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 5.1e-129 464.9 328 70.4
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 8.6e-129 464.2 330 70.0
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 5.6e-128 461.5 327 69.4
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.8e-126 456.4 321 71.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.2e-125 453.8 330 67.3
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.5e-125 453.4 330 69.4
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 7.6e-125 451.1 337 67.7
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.2e-124 449.5 301 75.1
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.9e-124 449.1 330 67.9
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 3.8e-124 448.7 330 68.2
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.1e-123 447.2 330 66.4
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.4e-123 446.0 330 67.9
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 3.2e-123 445.7 330 66.7
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 3.2e-123 445.7 330 66.7
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 6.0e-122 441.4 331 66.2
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 7.8e-122 441.0 330 65.5
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 3.9e-121 438.7 330 67.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 3.9e-121 438.7 330 66.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 5.6e-120 434.9 330 63.9
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 5.6e-120 434.9 332 63.9
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.3e-119 433.7 330 66.7
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.6e-119 433.3 330 63.6
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 6.2e-119 431.4 330 63.6
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 2.4e-118 429.5 331 65.3
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 9.0e-118 427.6 330 66.4
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 9.0e-118 427.6 330 63.6
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.5e-117 426.8 330 65.2
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 3.8e-116 422.2 330 63.6
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 8.4e-116 421.0 330 65.2
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.9e-115 419.9 330 62.7
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 2.4e-115 419.5 332 62.7
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 3.2e-115 419.1 330 63.3
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 5.4e-115 418.3 330 64.5
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 5.4e-115 418.3 334 62.9
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 2.1e-114 416.4 327 62.4
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 7.8e-114 414.5 330 63.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.0e-113 414.1 328 63.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.0e-113 414.1 329 60.8
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 2.3e-113 412.9 333 61.9
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 3.0e-113 412.5 332 62.7
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 3.0e-113 412.5 330 62.1
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 5.1e-113 411.8 327 64.8
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.5e-112 410.2 330 63.6
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.9e-112 409.8 328 62.8
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.9e-112 409.8 330 63.6
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.3e-111 407.1 331 64.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 3.6e-111 405.6 330 62.7
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 4.8e-111 405.2 295 69.2
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.9e-110 401.4 338 62.4
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 9.0e-110 401.0 329 61.7
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.0e-109 399.8 338 62.1
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 3.4e-109 399.1 332 62.7
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 9.9e-109 397.5 328 62.5
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 1.3e-108 397.1 330 59.7
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 3.2e-107 392.5 345 55.7
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 7.1e-107 391.3 330 58.8
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.2e-106 390.6 331 57.7
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 7.9e-106 387.9 372 57.0
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 2.3e-105 386.3 328 61.9
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 3.9e-105 385.6 329 60.5
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 5.1e-105 385.2 331 58.3
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.9e-104 383.3 338 59.8
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.4e-102 376.3 303 64.4
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 3.1e-102 375.9 331 59.8
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 9.0e-102 374.4 333 56.2
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.2e-101 374.0 291 64.3
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 2.6e-101 372.9 342 54.7
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.5e-99 366.3 329 58.7
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 7.9e-98 361.3 329 57.8
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.0e-97 360.9 334 54.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 3.3e-96 355.9 267 66.7
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.1e-94 350.9 334 53.3
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.5e-93 347.1 331 54.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.6e-93 346.3 323 57.0
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 4.5e-93 345.5 330 52.4
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 8.4e-92 341.3 326 56.7
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.4e-91 340.5 332 53.6
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.9e-91 340.1 333 54.1
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.9e-91 340.1 333 54.1
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 7.1e-91 338.2 331 51.7
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 2.1e-90 336.7 335 53.7
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.7e-90 336.3 294 55.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 3.0e-89 332.8 334 56.6
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.1e-86 324.3 333 51.4
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 4.5e-85 318.9 332 50.3
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 4.3e-80 302.4 338 46.4
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 6.3e-79 298.5 269 58.7
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 3.4e-77 292.7 260 56.5
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 6.5e-76 288.5 360 46.7
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 3.0e-73 279.6 331 49.2
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 3.9e-73 279.3 350 44.0
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 5.1e-73 278.9 217 65.4
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.5e-67 260.0 178 71.9
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 2.1e-66 256.9 337 44.2
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.8e-63 246.5 384 38.3
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.2e-61 241.1 383 38.1
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 9.1e-54 214.9 167 68.3
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 7.5e-48 195.3 133 69.2
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.1e-46 191.4 133 68.4
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 1.6e-37 161.0 123 64.2
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.7e-37 160.2 117 65.8
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.9e-36 156.8 133 55.6
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.1e-33 146.7 330 30.9
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 5.8e-32 142.5 104 67.3
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.3e-31 141.4 199 41.7
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 4.9e-31 139.4 123 62.6
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.5e-27 127.9 144 52.1
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.9e-27 127.5 87 71.3
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.2e-24 118.2 98 58.2
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 5.4e-22 109.4 147 44.2
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.8e-17 94.4 60 73.3
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 4.9e-15 86.3 98 51.0
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 6.4e-15 85.9 50 78.0
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 5.4e-14 82.8 326 24.5
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 3.5e-13 80.1 69 52.2
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 5.2e-09 66.2 49 67.3


User provided reference genes

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