Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 1.6e-132 476.1 240 100.0
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.2e-89 332.8 242 74.8
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 2.8e-84 315.8 238 69.3
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.4e-80 303.5 244 69.7
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.4e-80 303.5 242 67.8
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 4.1e-80 302.0 242 68.2
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 2.5e-77 292.7 243 65.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.1e-75 287.3 240 65.0
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.1e-75 287.3 240 65.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 3.4e-74 282.3 247 61.9
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 3.7e-73 278.9 243 62.1
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 3.2e-72 275.8 243 62.6
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 9.2e-72 274.2 239 62.3
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 3.0e-70 269.2 245 60.8
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 3.9e-70 268.9 250 62.4
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 6.2e-68 261.5 230 60.0
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.4e-67 260.4 240 57.9
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 2.3e-67 259.6 243 62.6
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.5e-66 256.9 244 57.8
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 3.4e-66 255.8 247 57.5
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 1.7e-65 253.4 250 55.2
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.1e-64 250.8 235 58.7
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 3.2e-64 249.2 241 54.8
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.0e-62 244.2 243 54.7
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 1.3e-62 243.8 240 55.8
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.3e-62 243.8 225 57.8
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 1.5e-61 240.4 247 53.4
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.9e-61 240.0 247 53.8
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 4.3e-61 238.8 239 54.8
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 4.3e-61 238.8 250 51.6
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.2e-60 237.3 254 52.8
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 1.6e-60 236.9 248 53.2
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.1e-60 236.5 249 51.4
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 2.8e-60 236.1 256 49.6
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.6e-60 235.7 245 53.5
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 4.7e-60 235.3 246 51.2
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 6.2e-60 235.0 237 55.7
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 8.9e-59 231.1 250 51.2
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.2e-58 230.7 251 50.6
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.5e-58 230.3 241 53.1
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.5e-58 230.3 246 52.8
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.0e-58 229.9 245 51.8
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.6e-58 229.6 227 59.0
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.4e-58 228.8 245 51.8
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 7.6e-58 228.0 245 51.4
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-57 227.3 245 52.2
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 2.2e-57 226.5 235 55.3
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.9e-57 226.1 245 52.2
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 2.9e-57 226.1 247 52.2
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 6.4e-57 224.9 235 51.1
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.9e-56 223.4 250 49.2
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 2.4e-56 223.0 250 52.4
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.2e-56 222.6 245 51.4
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.2e-56 222.6 238 53.8
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 4.2e-56 222.2 247 52.2
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 7.1e-56 221.5 247 51.0
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 9.3e-56 221.1 225 52.0
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 7.8e-55 218.0 223 56.1
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 7.8e-55 218.0 250 52.0
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 7.8e-55 218.0 240 50.4
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 1.9e-53 213.4 242 52.5
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.1e-52 209.9 237 51.1
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 4.8e-52 208.8 169 59.8
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.1e-51 207.6 257 47.9
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 1.8e-51 206.8 245 50.6
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 2.4e-51 206.5 169 60.9
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 4.0e-51 205.7 172 59.3
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 4.0e-51 205.7 233 50.2
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 1.5e-50 203.8 239 47.3
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 4.9e-49 198.7 170 56.5
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 1.4e-48 197.2 245 48.6
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 2.4e-48 196.4 243 48.1
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 4.2e-48 195.7 254 44.9
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 5.6e-45 185.3 236 49.6
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 4.0e-43 179.1 113 76.1
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.6e-42 176.4 141 63.1
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 7.6e-42 174.9 252 43.3
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 6.4e-41 171.8 232 44.4
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 1.9e-40 170.2 253 39.9
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 4.2e-40 169.1 238 44.1
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.1e-39 166.8 171 50.9
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 3.5e-39 166.0 171 51.5
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 1.8e-38 163.7 169 51.5
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 3.0e-38 162.9 169 50.9
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.5e-37 160.6 111 64.0
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.3e-36 157.5 240 39.2
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 2.8e-36 156.4 169 50.3
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.8e-36 156.4 257 42.8
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.8e-36 156.4 241 39.4
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 4.8e-36 155.6 289 38.4
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 8.2e-36 154.8 266 41.7
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 3.4e-34 149.4 230 43.9
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 5.8e-34 148.7 221 45.7
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.0e-33 147.9 301 37.5
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.9e-32 143.7 209 45.9
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 2.3e-22 110.2 128 50.0
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 8.7e-22 108.2 116 50.9
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 1.1e-21 107.8 218 33.9
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 5.7e-21 105.5 121 45.5
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.8e-20 103.2 107 53.3
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.1e-15 87.0 110 46.4
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 3.6e-15 86.3 259 29.0
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 1.1e-11 74.7 87 50.6
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.4e-10 69.7 240 27.9
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 7.7e-10 68.6 255 29.0
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 2.2e-09 67.0 91 42.9
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 2.2e-09 67.0 145 35.2
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.8e-06 57.4 54 42.6


User provided reference genes

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