Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 3.0e-48 194.9 102 100.0
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 4.2e-34 147.9 88 84.1
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.2e-33 146.4 89 86.5
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 3.6e-33 144.8 88 83.0
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 4.7e-33 144.4 88 81.8
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 6.1e-33 144.1 88 81.8
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 1.4e-32 142.9 91 84.6
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 1.4e-32 142.9 88 81.8
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 3.0e-32 141.7 88 80.7
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 1.2e-31 139.8 88 79.5
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 2.0e-31 139.0 88 81.8
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 2.0e-31 139.0 88 81.8
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 7.5e-31 137.1 88 77.3
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 9.8e-31 136.7 88 77.3
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 1.7e-30 136.0 89 80.9
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 1.7e-30 136.0 88 80.7
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 6.3e-30 134.0 88 75.0
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 1.1e-29 133.3 88 77.3
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 1.8e-29 132.5 88 73.9
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 1.8e-29 132.5 89 77.5
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 4.1e-29 131.3 88 73.9
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 4.1e-29 131.3 95 69.5
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 1.2e-28 129.8 95 71.6
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 1.2e-28 129.8 88 75.0
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 1.6e-28 129.4 88 75.0
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 2.0e-28 129.0 89 75.3
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 3.5e-28 128.3 88 76.1
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 4.5e-28 127.9 86 72.1
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 1.3e-27 126.3 89 79.8
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.3e-27 126.3 89 79.8
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 1.7e-27 125.9 89 79.8
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 2.3e-27 125.6 88 71.6
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.9e-27 125.2 89 79.8
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 3.8e-27 124.8 89 70.8
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 3.8e-27 124.8 95 66.3
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 5.0e-27 124.4 89 70.8
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 5.0e-27 124.4 88 73.9
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 5.0e-27 124.4 90 73.3
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 6.5e-27 124.0 89 78.7
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 6.5e-27 124.0 89 73.0
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 6.5e-27 124.0 89 74.2
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 8.6e-27 123.6 90 72.2
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 8.6e-27 123.6 88 71.6
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 1.1e-26 123.2 90 72.2
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 1.1e-26 123.2 89 70.8
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 1.1e-26 123.2 90 77.8
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.1e-26 123.2 89 78.7
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 1.5e-26 122.9 90 74.4
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.5e-26 122.9 90 72.2
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 1.5e-26 122.9 91 73.6
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 1.9e-26 122.5 89 70.8
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.9e-26 122.5 89 78.7
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 2.5e-26 122.1 95 65.3
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 2.5e-26 122.1 88 71.6
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 3.3e-26 121.7 90 75.6
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 4.2e-26 121.3 90 70.0
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 4.2e-26 121.3 90 75.6
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.2e-25 119.8 88 68.2
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.6e-25 119.4 92 72.8
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 1.6e-25 119.4 90 70.0
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 2.1e-25 119.0 88 70.5
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 2.8e-25 118.6 89 69.7
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 2.8e-25 118.6 97 68.0
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 3.6e-25 118.2 90 68.9
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 3.6e-25 118.2 90 73.3
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 6.1e-25 117.5 90 70.0
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 8.0e-25 117.1 97 64.9
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 8.0e-25 117.1 88 69.3
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 1.0e-24 116.7 93 67.7
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 1.4e-24 116.3 90 65.6
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 1.8e-24 115.9 90 74.4
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 2.3e-24 115.5 90 64.4
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 3.0e-24 115.2 88 67.0
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 4.0e-24 114.8 96 63.5
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 4.0e-24 114.8 88 67.0
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 5.2e-24 114.4 91 67.0
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 6.8e-24 114.0 88 65.9
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 6.8e-24 114.0 90 68.9
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 8.9e-24 113.6 88 64.8
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 1.2e-23 113.2 88 65.9
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.2e-23 113.2 91 67.0
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 1.5e-23 112.8 90 63.3
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.5e-23 112.8 91 68.1
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 1.5e-23 112.8 91 68.1
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 2.0e-23 112.5 89 64.0
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 2.0e-23 112.5 88 69.3
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 3.4e-23 111.7 88 63.6
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 3.4e-23 111.7 88 62.5
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 3.4e-23 111.7 88 63.6
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 3.4e-23 111.7 88 63.6
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 3.4e-23 111.7 88 63.6
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 4.4e-23 111.3 120 55.8
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 5.7e-23 110.9 87 64.4
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 5.7e-23 110.9 89 62.9
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 7.5e-23 110.5 90 63.3
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 9.8e-23 110.2 91 62.6
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 3.7e-22 108.2 89 61.8
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 4.9e-22 107.8 89 61.8
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 4.9e-22 107.8 89 61.8
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 6.3e-22 107.5 89 62.9
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 8.3e-22 107.1 89 61.8
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 8.3e-22 107.1 92 65.2
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 1.1e-21 106.7 89 62.9
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 1.4e-21 106.3 90 62.2
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 2.4e-21 105.5 90 62.2
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 3.1e-21 105.1 91 62.6
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 3.1e-21 105.1 89 65.2
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 7.0e-21 104.0 91 65.9
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 9.2e-21 103.6 89 64.0
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 2.0e-20 102.4 99 61.6
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 2.7e-20 102.1 88 63.6
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 2.9e-19 98.6 90 58.9
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 6.6e-19 97.4 87 60.9
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 8.6e-19 97.1 91 58.2
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 8.6e-19 97.1 58 79.3
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 1.5e-18 96.3 96 56.2
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 1.5e-18 96.3 59 78.0
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 1.2e-17 93.2 70 72.9
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 1.4e-16 89.7 95 53.7
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 3.0e-16 88.6 75 65.3
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 1.5e-15 86.3 69 68.1
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 5.8e-15 84.3 56 73.2
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 7.5e-15 84.0 82 54.9
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 7.5e-15 84.0 58 72.4
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 9.8e-15 83.6 70 70.0
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 5.4e-13 77.8 58 63.8
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 1.0e-11 73.6 40 92.5
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 1.3e-11 73.2 53 64.2
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 2.3e-11 72.4 42 85.7
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 5.0e-11 71.2 44 77.3
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 6.6e-11 70.9 40 87.5
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 1.9e-10 69.3 42 81.0
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 3.3e-10 68.6 41 80.5
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 8.0e-09 63.9 41 73.2
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 1.4e-08 63.2 48 62.5


User provided reference genes

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