Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.3e-154 549.7 271 100.0
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.9e-105 386.3 263 73.0
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 6.0e-104 381.3 266 73.3
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 2.3e-103 379.4 266 71.1
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 4.3e-102 375.2 268 70.1
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 2.8e-101 372.5 259 71.8
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 8.2e-101 370.9 263 71.1
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 1.1e-100 370.5 263 70.0
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 2.4e-100 369.4 263 69.2
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.5e-99 366.7 266 66.5
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 2.0e-99 366.3 263 71.1
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 2.0e-99 366.3 264 67.8
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 2.6e-99 365.9 263 68.8
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 2.6e-99 365.9 263 68.8
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 3.4e-99 365.5 267 70.4
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.4e-99 365.5 266 69.5
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 5.9e-99 364.8 266 68.8
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 5.9e-99 364.8 263 69.6
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.0e-98 364.0 264 67.4
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 3.8e-98 362.1 268 67.9
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 8.5e-98 360.9 267 69.3
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 1.4e-97 360.1 263 68.1
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 3.2e-97 359.0 257 70.4
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 4.2e-97 358.6 263 67.3
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 4.2e-97 358.6 259 68.7
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 7.2e-97 357.8 263 65.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 2.1e-96 356.3 267 67.0
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.7e-96 355.9 263 65.8
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 2.7e-96 355.9 263 65.8
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 4.6e-96 355.1 266 66.2
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 7.9e-96 354.4 263 68.1
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 1.0e-95 354.0 266 65.8
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.4e-95 353.6 263 65.0
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.8e-95 353.2 263 65.8
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 2.5e-94 349.4 270 64.8
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 9.7e-94 347.4 267 65.2
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 2.2e-93 346.3 263 66.5
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 4.8e-93 345.1 267 65.5
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.4e-92 343.6 262 66.4
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 4.1e-92 342.0 263 65.8
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 1.2e-91 340.5 268 62.7
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 5.9e-91 338.2 267 63.3
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.7e-90 336.7 269 63.2
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 1.7e-90 336.7 263 64.3
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.1e-89 334.0 268 61.6
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.1e-89 334.0 267 64.8
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 1.4e-89 333.6 266 63.5
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.4e-89 333.6 264 65.9
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 1.9e-89 333.2 264 64.0
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.9e-89 333.2 267 62.5
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 7.2e-89 331.3 267 62.2
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 7.2e-89 331.3 270 62.2
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 9.4e-89 330.9 267 64.4
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 1.2e-88 330.5 264 65.5
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.6e-88 330.1 264 62.9
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 1.6e-88 330.1 266 62.4
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 2.7e-88 329.3 266 62.8
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 6.1e-88 328.2 263 59.7
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.8e-87 326.6 268 59.7
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 3.0e-87 325.9 267 62.5
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 3.0e-87 325.9 269 63.6
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 6.7e-87 324.7 264 60.6
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 8.8e-87 324.3 266 62.8
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 7.4e-86 321.2 270 60.0
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 7.4e-86 321.2 270 59.6
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.8e-84 316.6 252 61.9
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.8e-84 316.6 252 61.9
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 2.4e-84 316.2 266 60.5
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.7e-82 310.1 263 61.2
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 2.9e-82 309.3 269 57.2
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 2.9e-82 309.3 269 57.2
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 3.2e-81 305.8 268 58.2
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 1.2e-80 303.9 268 57.1
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 5.2e-79 298.5 279 55.2
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 9.7e-78 294.3 267 55.4
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.7e-77 293.5 267 55.4
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 6.3e-77 291.6 270 55.6
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 8.2e-77 291.2 249 58.6
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 1.4e-76 290.4 272 55.1
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 5.9e-75 285.0 221 65.2
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 1.0e-74 284.3 271 53.5
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 1.3e-74 283.9 267 53.9
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 1.7e-74 283.5 268 53.7
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 1.1e-73 280.8 272 53.7
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 9.4e-73 277.7 269 53.5
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 9.4e-73 277.7 263 55.5
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 4.7e-72 275.4 269 52.8
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 8.0e-72 274.6 264 53.4
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 4.0e-71 272.3 268 51.5
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 4.0e-71 272.3 268 51.5
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.5e-70 270.4 266 52.3
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.7e-69 266.9 273 50.9
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.4e-68 263.1 268 51.1
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 7.7e-67 258.1 252 53.2
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 1.3e-66 257.3 259 49.4
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 1.9e-65 253.4 186 71.5
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.1e-60 235.7 196 61.7
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 7.7e-59 231.5 190 62.6
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 9.8e-54 214.5 252 43.3
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 2.2e-53 213.4 265 45.3
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 2.8e-53 213.0 145 74.5
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.1e-49 201.1 149 63.1
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 5.6e-49 198.7 145 66.9
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 4.9e-45 185.7 141 68.1
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 4.6e-43 179.1 145 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.7e-42 177.2 227 41.0
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.7e-42 177.2 249 39.0
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 1.3e-37 161.0 119 63.0
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 2.2e-37 160.2 320 35.0
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.1e-31 139.8 94 71.3
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 2.4e-28 130.2 83 71.1
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 1.2e-22 111.3 151 42.4
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.8e-22 109.0 121 46.3
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 9.9e-22 108.2 76 67.1
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 3.2e-20 103.2 65 73.8
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.2e-14 84.7 86 51.2
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 2.0e-14 84.0 235 29.8
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 5.8e-14 82.4 166 35.5
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 7.6e-14 82.0 232 29.7
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 2.9e-13 80.1 65 55.4
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 6.4e-13 79.0 65 61.5
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 2.1e-11 73.9 76 60.5
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 3.3e-09 66.6 95 46.3
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 3.1e-07 60.1 318 23.3
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 9.0e-07 58.5 44 54.5


User provided reference genes

Program Settings