Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43568 Davidia involucrata HOM05D004886 ORTHO05D005868 1.6e-58 229.2 111 100.0
Hma1.2p1_0021F.1_g014430 Hydrangea macrophylla HOM05D004886 ORTHO05D005868 1.4e-43 179.5 96 89.6
Dinv44001 Davidia involucrata HOM05D004886 ORTHO05D005868 1.6e-42 176.0 96 88.5
TAR375G0952 Trochodendron aralioides HOM05D004886 ORTHO05D005868 6.6e-41 170.6 96 83.3
Atru.chr5.18 Acer truncatum HOM05D004886 ORTHO05D005868 3.3e-40 168.3 96 83.3
Ciclev10022551m.g Citrus clementina HOM05D004886 ORTHO05D005868 1.3e-39 166.4 97 81.4
GSVIVG01018384001 Vitis vinifera HOM05D004886 ORTHO05D005868 1.3e-39 166.4 96 82.3
Haze_02935 Corylus avellana HOM05D004886 ORTHO05D005868 2.8e-39 165.2 101 78.2
HanXRQChr05g0162431 Helianthus annuus HOM05D004886 ORTHO05D005868 1.1e-38 163.3 96 83.3
Actinidia05803 Actinidia chinensis HOM05D004886 ORTHO05D005868 1.4e-38 162.9 97 82.5
CiPaw.14G014400 Carya illinoinensis HOM05D004886 ORTHO05D005868 1.4e-38 162.9 97 82.5
Lsat_1_v5_gn_6_101400 Lactuca sativa HOM05D004886 ORTHO05D005868 1.4e-38 162.9 94 85.1
Psat4g216480 Pisum sativum HOM05D004886 ORTHO05D005868 1.4e-38 162.9 99 78.8
vmacro13553 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 1.4e-38 162.9 98 82.7
Aqoxy3G02476 Aquilegia oxysepala HOM05D004886 ORTHO05D005868 1.8e-38 162.5 98 81.6
Rhsim07G0040800 Rhododendron simsii HOM05D004886 ORTHO05D005868 3.1e-38 161.8 98 81.6
Rhsim07G0041300 Rhododendron simsii HOM05D004886 ORTHO05D005868 3.1e-38 161.8 98 81.6
RhsimUnG0113600 Rhododendron simsii HOM05D004886 ORTHO05D005868 3.1e-38 161.8 98 81.6
CSS0044670 Camellia sinensis var. sinensis HOM05D004886 ORTHO05D005868 5.3e-38 161.0 103 78.6
MELO3C022467.2 Cucumis melo HOM05D004886 ORTHO05D005868 1.5e-37 159.5 97 81.4
CiPaw.13G020500 Carya illinoinensis HOM05D004886 ORTHO05D005868 4.5e-37 157.9 98 79.6
ECA246G0884 Erigeron canadensis HOM05D004886 ORTHO05D005868 4.5e-37 157.9 96 81.2
Nitab4.5_0001476g0110 Nicotiana tabacum HOM05D004886 ORTHO05D005868 2.9e-36 155.2 100 76.0
MSTRG.28124 Avicennia marina HOM05D004886 ORTHO05D005868 4.9e-36 154.5 94 79.8
Glyma.03G100700 Glycine max HOM05D004886 ORTHO05D005868 6.4e-36 154.1 100 77.0
Nn1g07674 Nelumbo nucifera HOM05D004886 ORTHO05D005868 6.4e-36 154.1 95 75.8
Nn1g07677 Nelumbo nucifera HOM05D004886 ORTHO05D005868 6.4e-36 154.1 95 75.8
Nitab4.5_0004264g0010 Nicotiana tabacum HOM05D004886 ORTHO05D005868 6.4e-36 154.1 100 75.0
THA.LOC104817165 Tarenaya hassleriana HOM05D004886 ORTHO05D005868 6.4e-36 154.1 96 76.0
Oeu002885.1 Olea europaea HOM05D004886 ORTHO05D005868 8.4e-36 153.7 96 77.1
VMungo0331G0020 Vigna mungo HOM05D004886 ORTHO05D005868 8.4e-36 153.7 99 77.8
Thhalv10006276m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 1.4e-35 152.9 96 76.0
Phvul.010G040200 Phaseolus vulgaris HOM05D004886 ORTHO05D005868 1.4e-35 152.9 99 77.8
Cpa.g.sc587.3 Carica papaya HOM05D004886 ORTHO05D005868 1.9e-35 152.5 108 68.5
A04p01810 Brassica napus HOM05D004886 ORTHO05D005868 2.4e-35 152.1 96 77.1
BraA04t15905Z Brassica rapa HOM05D004886 ORTHO05D005868 2.4e-35 152.1 96 77.1
Migut.N01703 Erythranthe guttata HOM05D004886 ORTHO05D005868 2.4e-35 152.1 95 80.0
Peaxi162Scf01124g00012 Petunia axillaris HOM05D004886 ORTHO05D005868 3.2e-35 151.8 96 77.1
Thecc.10G000600 Theobroma cacao HOM05D004886 ORTHO05D005868 3.2e-35 151.8 97 76.3
TWI59G0909 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 3.2e-35 151.8 98 77.6
vmacro21096 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 3.2e-35 151.8 110 72.7
Cc02_g25880 Coffea canephora HOM05D004886 ORTHO05D005868 4.2e-35 151.4 97 76.3
TPR.G17348 Trifolium pratense HOM05D004886 ORTHO05D005868 4.2e-35 151.4 106 71.7
DCAR_015764 Daucus carota HOM05D004886 ORTHO05D005868 5.4e-35 151.0 101 73.3
Aa31LG10G14300 Aethionema arabicum HOM05D004886 ORTHO05D005868 9.3e-35 150.2 97 74.2
BcaB02g08189 Brassica carinata HOM05D004886 ORTHO05D005868 9.3e-35 150.2 96 76.0
Sp4g26620 Schrenkiella parvula HOM05D004886 ORTHO05D005868 9.3e-35 150.2 96 75.0
Hund26556 Selenicereus undatus HOM05D004886 ORTHO05D005868 9.3e-35 150.2 98 72.4
Potri.014G179500 Populus trichocarpa HOM05D004886 ORTHO05D005868 1.2e-34 149.8 95 75.8
Lalb_Chr07g0194931 Lupinus albus HOM05D004886 ORTHO05D005868 1.6e-34 149.4 99 72.7
Sed0007303 Sechium edule HOM05D004886 ORTHO05D005868 2.1e-34 149.1 97 76.3
Aa31LG1G26120 Aethionema arabicum HOM05D004886 ORTHO05D005868 2.7e-34 148.7 96 75.0
COL.COLO4_20817 Corchorus olitorius HOM05D004886 ORTHO05D005868 2.7e-34 148.7 100 75.0
CARHR139740 Cardamine hirsuta HOM05D004886 ORTHO05D005868 3.5e-34 148.3 96 72.9
Manes.05G060800 Manihot esculenta HOM05D004886 ORTHO05D005868 3.5e-34 148.3 94 74.5
Carub.0004s2709 Capsella rubella HOM05D004886 ORTHO05D005868 4.6e-34 147.9 96 74.0
Sed0018381 Sechium edule HOM05D004886 ORTHO05D005868 4.6e-34 147.9 97 76.3
Sabra14G0137800 Salix brachista HOM05D004886 ORTHO05D005868 6.0e-34 147.5 95 74.7
AL4G43550 Arabidopsis lyrata HOM05D004886 ORTHO05D005868 1.0e-33 146.7 96 72.9
AT2G44525 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 1.0e-33 146.7 96 72.9
AT3G60150 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 1.3e-33 146.4 96 74.0
BraA05t19444Z Brassica rapa HOM05D004886 ORTHO05D005868 1.3e-33 146.4 96 71.9
MBI04_g13864_MAGBIO Magnolia biondii HOM05D004886 ORTHO05D005868 1.3e-33 146.4 95 72.6
BcaB02g08829 Brassica carinata HOM05D004886 ORTHO05D005868 1.8e-33 146.0 96 70.8
CANSAT21G0345 Cannabis sativa HOM05D004886 ORTHO05D005868 1.8e-33 146.0 106 69.8
Medtr8g009670 Medicago truncatula HOM05D004886 ORTHO05D005868 1.8e-33 146.0 103 72.8
SalBow4G2359 Salvia bowleyana HOM05D004886 ORTHO05D005868 1.8e-33 146.0 96 76.0
arahy.Tifrunner.gnm1.ann1.FT2T1Y Arachis hypogaea HOM05D004886 ORTHO05D005868 2.3e-33 145.6 91 75.8
BcaC02g12300 Brassica carinata HOM05D004886 ORTHO05D005868 2.3e-33 145.6 96 70.8
C04p05420 Brassica napus HOM05D004886 ORTHO05D005868 2.3e-33 145.6 96 70.8
BolC4t22182H Brassica oleracea HOM05D004886 ORTHO05D005868 2.3e-33 145.6 96 70.8
A05p04680 Brassica napus HOM05D004886 ORTHO05D005868 3.0e-33 145.2 96 70.8
Thhalv10001659m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 3.9e-33 144.8 96 72.9
Gorai.012G082000 Gossypium raimondii HOM05D004886 ORTHO05D005868 3.9e-33 144.8 98 75.5
Gohir.A05G333500 Gossypium hirsutum HOM05D004886 ORTHO05D005868 5.1e-33 144.4 98 74.5
Prupe.3G009000 Prunus persica HOM05D004886 ORTHO05D005868 5.1e-33 144.4 96 71.9
QL04p024857 Quercus lobata HOM05D004886 ORTHO05D005868 5.1e-33 144.4 100 70.0
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 6.7e-33 144.1 86 79.1
Sc23g0004110 Simmondsia chinensis HOM05D004886 ORTHO05D005868 6.7e-33 144.1 104 69.2
Sabra14G0139700 Salix brachista HOM05D004886 ORTHO05D005868 8.7e-33 143.7 95 72.6
TWI14G0309 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 8.7e-33 143.7 98 70.4
MD09G1285000 Malus domestica HOM05D004886 ORTHO05D005868 1.1e-32 143.3 99 70.7
SGA_v2.0_scaffold77G25231 Striga asiatica HOM05D000012 ORTHO05D001060 1.1e-32 143.3 96 69.8
PSO063G1771 Papaver somniferum HOM05D004886 ORTHO05D005868 1.5e-32 142.9 98 70.4
Gohir.D04G073000 Gossypium hirsutum HOM05D004886 ORTHO05D005868 2.5e-32 142.1 98 74.5
EL10Ac8g19580 Beta vulgaris HOM05D004886 ORTHO05D005868 3.3e-32 141.7 98 70.4
AUR62038597 Chenopodium quinoa HOM05D004886 ORTHO05D005868 3.3e-32 141.7 101 70.3
Sp5g03060 Schrenkiella parvula HOM05D004886 ORTHO05D005868 3.3e-32 141.7 96 71.9
Carub.0005s2688 Capsella rubella HOM05D004886 ORTHO05D005868 4.3e-32 141.4 97 71.1
CAN.G74.36 Capsicum annuum HOM05D004886 ORTHO05D005868 4.3e-32 141.4 97 71.1
RcHm_v2.0_Chr3g0487321 Rosa chinensis HOM05D004886 ORTHO05D005868 4.3e-32 141.4 88 77.3
Ah.09g232340 Amaranthus hybridus HOM05D004886 ORTHO05D005868 5.6e-32 141.0 101 70.3
MD07G1082600 Malus domestica HOM05D004886 ORTHO05D005868 5.6e-32 141.0 98 70.4
PSO782G3769 Papaver somniferum HOM05D004886 ORTHO05D005868 5.6e-32 141.0 98 70.4
arahy.Tifrunner.gnm1.ann1.U68WY7 Arachis hypogaea HOM05D004886 ORTHO05D005868 7.4e-32 140.6 91 74.7
CsaV3_6G004620 Cucumis sativus L. HOM05D004886 ORTHO05D005868 7.4e-32 140.6 126 61.1
CsaV3_6G021750 Cucumis sativus L. HOM05D004886 ORTHO05D005868 7.4e-32 140.6 126 61.1
CsaV3_6G037000 Cucumis sativus L. HOM05D004886 ORTHO05D005868 7.4e-32 140.6 126 61.1
CsaV3_UNG176370 Cucumis sativus L. HOM05D004886 ORTHO05D005868 7.4e-32 140.6 127 60.6
FvH4_1g27010 Fragaria vesca HOM05D004886 ORTHO05D005868 7.4e-32 140.6 88 77.3
Prupe.2G110500 Prunus persica HOM05D004886 ORTHO05D005868 7.4e-32 140.6 90 76.7
Duzib128G0726 Durio zibethinus HOM05D004886 ORTHO05D005868 9.6e-32 140.2 99 70.7
Sopen01g035180 Solanum pennellii HOM05D004886 ORTHO05D005868 9.6e-32 140.2 98 69.4
FAN19G1058 Fragaria x ananassa HOM05D004886 ORTHO05D005868 1.6e-31 139.4 88 76.1
FAN23G1419 Fragaria x ananassa HOM05D004886 ORTHO05D005868 2.1e-31 139.0 88 75.0
Solyc01g088350.4 Solanum lycopersicum HOM05D004886 ORTHO05D005868 2.8e-31 138.7 98 68.4
AUR62034033 Chenopodium quinoa HOM05D004886 ORTHO05D005868 3.7e-31 138.3 101 69.3
FAN28G1372 Fragaria x ananassa HOM05D004886 ORTHO05D005868 3.7e-31 138.3 88 76.1
BcaC02g10116 Brassica carinata HOM05D004886 ORTHO05D005868 6.2e-31 137.5 89 74.2
C04p32550 Brassica napus HOM05D004886 ORTHO05D005868 6.2e-31 137.5 89 74.2
BolC4t24818H Brassica oleracea HOM05D004886 ORTHO05D005868 6.2e-31 137.5 89 74.2
CDE11G0764 Ceratophyllum demersum HOM05D004886 ORTHO05D005868 6.2e-31 137.5 96 66.7
Eucgr.D01136 Eucalyptus grandis HOM05D004886 ORTHO05D005868 8.1e-31 137.1 99 72.7
FAN26G2919 Fragaria x ananassa HOM05D004886 ORTHO05D005868 1.8e-30 136.0 88 75.0
Lj3g0025670 Lotus japonicus HOM05D004886 ORTHO05D005868 6.9e-30 134.0 98 67.3
unitig_85.g27219 Utricularia gibba HOM05D004886 ORTHO05D005868 2.6e-29 132.1 95 69.5
HPP92_003510 Vanilla planifolia HOM05D004886 ORTHO05D005868 3.4e-29 131.7 93 67.7
PGR044G2350 Punica granatum HOM05D004886 ORTHO05D005868 7.6e-29 130.6 98 69.4
Lj9C547T8 Lonicera japonica HOM05D004886 ORTHO05D005868 2.4e-27 125.6 107 62.6
Zm00001eb390620 Zea mays HOM05D004886 ORTHO05D005868 2.1e-26 122.5 94 62.8
MD04G1140000 Malus domestica HOM05D004886 ORTHO05D005868 3.5e-26 121.7 98 62.2
Os10g0571100 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 1.0e-25 120.2 94 63.8
CARHR170460 Cardamine hirsuta HOM05D004886 ORTHO05D005868 3.0e-25 118.6 82 73.2
CsaV3_5G024660 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.5e-24 116.3 99 61.6
Zm00001eb024270 Zea mays HOM05D004886 ORTHO05D005868 9.6e-24 113.6 94 58.5
CsaV3_6G006530 Cucumis sativus L. HOM05D004886 ORTHO05D005868 2.4e-22 109.0 64 78.1
CsaV3_3G022410 Cucumis sativus L. HOM05D004886 ORTHO05D005868 6.9e-22 107.5 118 51.7
SHI13674 Sapria himalayana HOM05D004886 ORTHO05D005868 4.2e-19 98.2 65 64.6
SEGI_24442 Sequoiadendron giganteum HOM05D004886 ORTHO05D005868 6.0e-18 94.4 85 49.4
Actinidia30969 Actinidia chinensis HOM05D004886 ORTHO05D005868 1.8e-14 82.8 45 82.2
ClCG06G000740 Citrullus lanatus HOM05D004886 ORTHO05D005868 2.4e-14 82.4 58 74.1
HPP92_003514 Vanilla planifolia HOM05D004886 ORTHO05D005868 1.0e-12 77.0 93 45.2
CAN.G1480.6 Capsicum annuum HOM05D004886 ORTHO05D005868 1.6e-10 69.7 38 73.7
Mapoly0033s0133 Marchantia polymorpha HOM05D004886 ORTHO05D005868 6.1e-10 67.8 67 40.3
Pp3c12_4990 Physcomitrium patens HOM05D004886 ORTHO05D005868 6.7e-09 64.3 68 39.7
SGA_v2.0_scaffold95G28731 Striga asiatica HOM05D004886 ORTHO05D005868 8.8e-09 63.9 41 61.0
AagrBONN_evm.TU.Sc2ySwM_344.1568 Anthoceros agrestis HOM05D004886 ORTHO05D005868 5.7e-08 61.2 66 36.4


User provided reference genes

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