Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 2.4e-232 808.5 420 100.0
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 5.5e-189 664.5 412 84.0
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 4.7e-188 661.4 373 91.4
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 2.2e-185 652.5 412 82.5
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 2.2e-177 625.9 407 78.9
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 3.2e-176 622.1 401 80.0
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 1.9e-173 612.8 410 78.5
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 6.8e-171 604.4 393 79.1
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 4.4e-170 601.7 407 77.1
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 4.9e-169 598.2 416 77.2
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 3.2e-168 595.5 397 77.1
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 9.2e-168 594.0 435 73.3
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 8.6e-166 587.4 416 74.0
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 4.7e-164 581.6 412 73.3
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 6.2e-164 581.3 385 78.2
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 1.8e-163 579.7 376 77.1
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 2.3e-163 579.3 430 71.9
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 3.1e-163 578.9 395 77.0
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 2.6e-162 575.9 403 75.7
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 4.4e-162 575.1 411 72.0
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 1.3e-161 573.5 421 72.7
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 3.7e-161 572.0 411 72.5
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 4.9e-161 571.6 409 73.8
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 6.4e-161 571.2 408 74.5
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 6.4e-161 571.2 411 72.3
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 1.1e-160 570.5 403 74.9
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 1.1e-160 570.5 408 74.3
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 3.2e-160 568.9 404 74.0
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 4.1e-160 568.5 408 74.0
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 9.2e-160 567.4 392 77.0
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 2.1e-159 566.2 402 71.9
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 3.5e-159 565.5 402 71.6
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.0e-159 564.7 416 72.8
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.3e-158 563.5 416 72.8
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 5.1e-158 561.6 394 74.1
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 6.6e-158 561.2 408 73.5
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 2.5e-157 559.3 412 72.8
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 1.6e-156 556.6 416 71.2
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 2.1e-156 556.2 427 70.0
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 2.1e-156 556.2 398 71.9
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 2.8e-156 555.8 416 70.7
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 2.8e-156 555.8 408 71.6
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 1.4e-155 553.5 362 75.4
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 1.4e-155 553.5 391 73.1
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 1.4e-155 553.5 406 72.9
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 1.8e-155 553.1 437 67.3
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 6.8e-155 551.2 446 66.6
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 2.0e-154 549.7 413 70.9
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 2.9e-153 545.8 420 69.0
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 2.9e-153 545.8 403 69.7
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 3.8e-153 545.4 339 82.3
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 6.4e-153 544.7 402 70.9
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 4.1e-152 542.0 404 70.8
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 9.2e-152 540.8 369 75.1
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.6e-151 540.0 409 68.9
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 7.8e-151 537.7 421 68.2
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 7.8e-151 537.7 407 71.5
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 2.3e-150 536.2 410 70.0
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 2.5e-149 532.7 406 69.2
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 4.3e-149 531.9 381 73.8
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 1.4e-147 526.9 400 70.0
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 1.8e-147 526.6 405 69.9
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.8e-147 526.6 373 72.9
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 5.2e-147 525.0 373 72.7
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 2.6e-146 522.7 405 68.6
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 4.4e-146 521.9 408 68.6
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 5.8e-146 521.5 404 68.8
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 1.7e-145 520.0 411 68.4
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 2.9e-145 519.2 370 73.0
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 3.8e-145 518.8 401 66.8
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 1.4e-144 516.9 382 71.7
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 1.9e-144 516.5 380 71.1
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 4.2e-144 515.4 413 67.1
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 1.2e-143 513.8 377 72.4
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 2.3e-142 509.6 397 67.0
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 1.5e-141 506.9 366 70.8
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 9.6e-141 504.2 375 69.9
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 2.8e-140 502.7 407 66.3
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 1.1e-139 500.7 409 65.8
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 1.1e-139 500.7 406 66.0
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 1.8e-139 500.0 364 71.2
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 2.4e-139 499.6 366 70.2
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 3.1e-139 499.2 418 63.6
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 3.1e-139 499.2 416 65.6
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 4.5e-138 495.4 403 67.2
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 7.6e-138 494.6 393 66.7
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 3.8e-137 492.3 362 70.7
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 4.9e-137 491.9 372 68.3
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 4.9e-137 491.9 372 68.3
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 1.1e-136 490.7 407 63.9
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 1.2e-135 487.3 371 66.8
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 1.2e-135 487.3 367 69.5
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 1.6e-135 486.9 380 65.5
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 1.6e-135 486.9 381 67.7
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 4.6e-135 485.3 368 69.6
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 3.1e-131 472.6 412 64.1
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 7.6e-130 468.0 354 69.8
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 7.6e-130 468.0 354 69.8
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 8.7e-126 454.5 341 68.9
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 1.5e-125 453.8 307 76.5
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 4.3e-125 452.2 380 62.9
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 2.8e-124 449.5 337 68.0
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 1.2e-122 444.1 335 68.4
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 2.0e-122 443.4 347 67.7
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 1.7e-121 440.3 294 78.2
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 5.9e-114 415.2 249 84.7
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.0e-113 414.5 272 73.2
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 5.0e-113 412.1 268 78.4
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 4.8e-108 395.6 239 79.9
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 4.1e-107 392.5 360 56.4
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 1.0e-102 377.9 375 53.1
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 2.0e-98 363.6 348 53.4
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 9.7e-93 344.7 247 72.1
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 2.0e-90 337.0 338 52.4
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 2.6e-90 336.7 306 58.8
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 3.5e-90 336.3 249 71.1
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 2.9e-89 333.2 201 83.1
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 1.0e-86 324.7 261 61.7
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 3.5e-82 309.7 359 53.8
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 1.6e-71 274.2 190 73.2
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 1.5e-69 267.7 292 52.1
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 7.5e-69 265.4 343 44.6
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 9.8e-69 265.0 295 48.1
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 1.7e-68 264.2 283 51.2
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 3.1e-67 260.0 292 51.4
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 2.0e-66 257.3 170 75.3
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 2.3e-54 217.2 246 53.3
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.4e-46 191.4 158 67.7
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 2.3e-46 190.7 204 53.9
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 9.2e-35 152.1 367 33.8
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 1.1e-32 145.2 121 64.5
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 5.3e-30 136.3 84 81.0
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 2.2e-28 131.0 83 75.9
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 3.2e-27 127.1 76 75.0
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 2.4e-22 110.9 72 73.6
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 9.9e-21 105.5 91 61.5
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 3.8e-20 103.6 72 69.4
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 1.3e-15 88.6 99 49.5
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 2.9e-12 77.4 57 68.4
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.0e-09 68.9 85 51.8
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 1.3e-07 62.0 32 93.8


User provided reference genes

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