Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 5.2e-58 227.6 126 100.0
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 2.2e-48 195.7 109 100.0
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 4.4e-33 144.8 127 72.4
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.5e-20 103.2 139 57.6
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 1.9e-20 102.8 133 52.6
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 3.6e-19 98.6 81 71.6
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 4.8e-19 98.2 123 56.9
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 4.0e-18 95.1 103 59.2
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 9.0e-18 94.0 98 62.2
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 1.2e-17 93.6 127 53.5
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.0e-17 92.8 126 53.2
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 2.6e-17 92.4 126 53.2
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 3.4e-17 92.0 70 74.3
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 3.4e-17 92.0 92 59.8
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 4.4e-17 91.7 63 82.5
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 7.6e-17 90.9 70 75.7
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 9.9e-17 90.5 137 48.9
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 1.7e-16 89.7 106 55.7
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 2.2e-16 89.4 107 56.1
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 3.8e-16 88.6 72 68.1
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 6.4e-16 87.8 126 49.2
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 8.4e-16 87.4 124 51.6
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 1.9e-15 86.3 95 55.8
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 3.2e-15 85.5 96 55.2
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 4.2e-15 85.1 94 56.4
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 5.4e-15 84.7 70 71.4
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 5.4e-15 84.7 83 61.4
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 7.1e-15 84.3 71 67.6
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 7.1e-15 84.3 75 65.3
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 7.1e-15 84.3 69 69.6
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 1.6e-14 83.2 124 46.8
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.5e-14 82.0 112 49.1
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 4.6e-14 81.6 129 46.5
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 6.0e-14 81.3 161 43.5
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 3.0e-13 79.0 69 60.9
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 3.0e-13 79.0 70 68.6
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 3.9e-13 78.6 92 53.3
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 5.1e-13 78.2 70 64.3
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 5.1e-13 78.2 116 46.6
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 6.6e-13 77.8 71 64.8
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 2.5e-12 75.9 70 65.7
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 2.5e-12 75.9 70 65.7
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 3.3e-12 75.5 120 47.5
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 4.3e-12 75.1 69 59.4
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 5.6e-12 74.7 70 64.3
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 5.6e-12 74.7 101 54.5
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 9.6e-12 73.9 84 59.5
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.6e-11 73.2 125 44.0
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 2.8e-11 72.4 63 65.1
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 2.8e-11 72.4 69 63.8
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.6e-11 72.0 130 46.2
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 8.1e-11 70.9 95 48.4
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.1e-10 70.5 130 45.4
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.1e-10 70.5 130 45.4
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 1.4e-10 70.1 117 46.2
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 1.4e-10 70.1 130 43.8
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 1.4e-10 70.1 70 60.0
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 2.4e-10 69.3 70 60.0
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.1e-10 68.9 130 44.6
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 9.0e-10 67.4 77 51.9
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 1.5e-09 66.6 128 40.6
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 2.0e-09 66.2 70 61.4
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 3.4e-09 65.5 57 70.2
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 7.6e-09 64.3 69 58.0
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 4.6e-06 55.1 45 66.7
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 7.9e-06 54.3 124 36.3


User provided reference genes

Program Settings