Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43541 Davidia involucrata HOM05D000086 ORTHO05D000431 2.1e-61 238.8 120 100.0
Hma1.2p1_0420F.1_g149690 Hydrangea macrophylla HOM05D000086 ORTHO05D000431 6.5e-18 94.4 88 58.0
Hma1.2p1_0466F.1_g158575 Hydrangea macrophylla HOM05D000086 ORTHO05D000431 6.5e-18 94.4 88 58.0
Thecc.05G230800 Theobroma cacao HOM05D000086 ORTHO05D000431 2.8e-13 79.0 97 54.6
TAR629G1102 Trochodendron aralioides HOM05D000086 ORTHO05D000431 4.8e-13 78.2 92 51.1
Duzib177G0895 Durio zibethinus HOM05D000086 ORTHO05D000431 4.1e-12 75.1 109 50.5
Actinidia30980 Actinidia chinensis HOM05D000086 ORTHO05D000431 5.4e-12 74.7 92 51.1
TAR375G0111 Trochodendron aralioides HOM05D000086 ORTHO05D000431 5.4e-12 74.7 92 52.2
CSS0012086 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 3.8e-10 68.6 84 46.4
Cc02_g26240 Coffea canephora HOM05D000086 ORTHO05D000431 5.0e-10 68.2 87 51.7
Thecc.03G225600 Theobroma cacao HOM05D000086 ORTHO05D000431 5.0e-10 68.2 92 48.9
CSS0027352 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 6.6e-10 67.8 85 50.6
Nn1g00126 Nelumbo nucifera HOM05D000086 ORTHO05D000431 8.6e-10 67.4 92 46.7
Prupe.2G098800 Prunus persica HOM05D000086 ORTHO05D000431 4.2e-09 65.1 96 47.9
Gohir.D13G163900 Gossypium hirsutum HOM05D000086 ORTHO05D000431 3.6e-08 62.0 99 48.5
Eucgr.E01776 Eucalyptus grandis HOM05D000086 ORTHO05D000431 8.0e-08 60.8 117 37.6
MSTRG.17090 Avicennia marina HOM05D000086 ORTHO05D000431 1.8e-07 59.7 92 44.6
Gohir.D12G210400 Gossypium hirsutum HOM05D000086 ORTHO05D000431 1.8e-07 59.7 92 44.6
COL.COLO4_08534 Corchorus olitorius HOM05D000086 ORTHO05D000431 2.3e-07 59.3 101 45.5
Gohir.A13G158800 Gossypium hirsutum HOM05D000086 ORTHO05D000431 3.0e-07 58.9 99 46.5
Gorai.013G199300 Gossypium raimondii HOM05D000086 ORTHO05D000431 3.0e-07 58.9 99 47.5
Duzib205G1956 Durio zibethinus HOM05D000086 ORTHO05D000431 4.0e-07 58.5 92 43.5
QL04p052252 Quercus lobata HOM05D000086 ORTHO05D000431 5.2e-07 58.2 91 41.8
Gorai.008G225900 Gossypium raimondii HOM05D000086 ORTHO05D000431 8.9e-07 57.4 92 43.5
HanXRQChr16g0520801 Helianthus annuus HOM05D000086 ORTHO05D000431 8.9e-07 57.4 102 39.2
Dinv25226 Davidia involucrata HOM05D000086 ORTHO05D000431 2.6e-06 55.8 89 41.6
MELO3C006278.2 Cucumis melo HOM05D000086 ORTHO05D000431 3.4e-06 55.5 86 46.5
CsaV3_3G010590 Cucumis sativus L. HOM05D000086 ORTHO05D000431 3.4e-06 55.5 86 45.3
PGR042G2532 Punica granatum HOM05D000086 ORTHO05D000431 3.4e-06 55.5 102 36.3
Ciclev10031956m.g Citrus clementina HOM05D000086 ORTHO05D000431 5.7e-06 54.7 90 40.0
Glyma.01G017300 Glycine max HOM05D000086 ORTHO05D000431 7.5e-06 54.3 92 40.2
Glyma.09G205600 Glycine max HOM05D000086 ORTHO05D000431 7.5e-06 54.3 92 40.2
Dinv28968 Davidia involucrata HOM05D000086 ORTHO05D000431 9.8e-06 53.9 92 44.6
Oeu032761.1 Olea europaea HOM05D000086 ORTHO05D000431 9.8e-06 53.9 94 40.4


User provided reference genes

Program Settings