Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 1.0e-48 197.2 174 100.0
Dinv43963 Davidia involucrata HOM05D008698 ORTHO05D010072 2.2e-22 109.8 207 71.0
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 2.7e-20 102.8 188 68.1
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 1.1e-18 97.4 191 71.7
GSVIVG01019304001 Vitis vinifera HOM05D008698 ORTHO05D010072 4.7e-17 92.0 204 59.8
CiPaw.02G047000 Carya illinoinensis HOM05D008698 ORTHO05D010072 6.1e-17 91.7 203 71.4
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 5.2e-16 88.6 172 70.3
Actinidia31735 Actinidia chinensis HOM05D008698 ORTHO05D010072 2.9e-14 82.8 192 63.5
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 1.1e-13 80.9 198 53.0
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 4.1e-13 79.0 183 65.0
Duzib128G0528 Durio zibethinus HOM05D008698 ORTHO05D010072 7.0e-13 78.2 211 59.7
QL04p053348 Quercus lobata HOM05D008698 ORTHO05D010072 9.2e-13 77.8 194 69.1
Prupe.2G106300 Prunus persica HOM05D008698 ORTHO05D010072 3.5e-12 75.9 207 54.6
Thecc.05G234300 Theobroma cacao HOM05D008698 ORTHO05D010072 3.5e-12 75.9 192 65.1
Cfa003696 Carpinus fangiana HOM05D008698 ORTHO05D010072 1.3e-11 73.9 197 65.0
Gohir.A11G224226 Gossypium hirsutum HOM05D008698 ORTHO05D010072 1.7e-11 73.6 179 70.9
Eucgr.L01353 Eucalyptus grandis HOM05D008698 ORTHO05D010072 5.0e-11 72.0 80 70.0
Hma1.2p1_0353F.1_g133170 Hydrangea macrophylla HOM05D008698 ORTHO05D010072 6.6e-11 71.6 199 57.8
Eucgr.D01072 Eucalyptus grandis HOM05D008698 ORTHO05D010072 8.6e-11 71.2 80 68.8
Manes.08G156500 Manihot esculenta HOM05D008698 ORTHO05D010072 1.5e-10 70.5 177 71.8
Sed0010525 Sechium edule HOM05D023437 ORTHO05D010072 2.5e-10 69.7 192 56.8
CSS0045987 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 9.5e-10 67.8 176 61.9
Duzib177G0795 Durio zibethinus HOM05D008698 ORTHO05D010072 1.2e-09 67.4 183 68.3
Haze_15790 Corylus avellana HOM05D008698 ORTHO05D010072 2.8e-09 66.2 199 61.3
Eucgr.D01077 Eucalyptus grandis HOM05D008698 ORTHO05D010072 4.7e-09 65.5 85 68.2
Nn1g09349 Nelumbo nucifera HOM05D016621 ORTHO05D010071 6.2e-09 65.1 182 58.8
ClCG05G002490 Citrullus lanatus HOM05D023437 ORTHO05D010072 1.8e-08 63.5 184 54.9
Actinidia20018 Actinidia chinensis HOM05D020756 ORTHO05D010072 2.3e-08 63.2 176 59.1
Cc05_g03920 Coffea canephora HOM05D008698 ORTHO05D010072 4.0e-08 62.4 180 63.9
SGA_v2.0_scaffold5G03096 Striga asiatica HOM05D008698 ORTHO05D010072 4.0e-08 62.4 179 66.5
Gohir.D11G236900 Gossypium hirsutum HOM05D008698 ORTHO05D010072 5.2e-08 62.0 179 68.7
Gorai.007G250000 Gossypium raimondii HOM05D008698 ORTHO05D010072 5.2e-08 62.0 179 68.7
Nn3g19109 Nelumbo nucifera HOM05D016621 ORTHO05D010071 5.2e-08 62.0 193 58.5
MD02G1232500 Malus domestica HOM05D018025 ORTHO05D020667 6.8e-08 61.6 209 54.1
Ah.05g177120 Amaranthus hybridus HOM05D008698 ORTHO05D010072 1.2e-07 60.8 177 59.3
MELO3C006213.2 Cucumis melo HOM05D023437 ORTHO05D010072 1.2e-07 60.8 181 51.9
Oeu054159.1 Olea europaea HOM05D008698 ORTHO05D010072 1.2e-07 60.8 197 63.5
TAR375G0911 Trochodendron aralioides HOM05D008698 ORTHO05D010072 1.5e-07 60.5 162 70.4
Peaxi162Scf00907g00022 Petunia axillaris HOM05D016597 ORTHO05D018539 2.0e-07 60.1 176 68.2
Potri.013G070900 Populus trichocarpa HOM05D008698 ORTHO05D010072 2.0e-07 60.1 149 59.7
Actinidia32790 Actinidia chinensis HOM05D016621 ORTHO05D010071 3.4e-07 59.3 99 60.6
HanXRQChr04g0117701 Helianthus annuus HOM05D018323 ORTHO05D010072 7.5e-07 58.2 83 53.0
Glyma.07G122400 Glycine max HOM05D015382 ORTHO05D019009 9.8e-07 57.8 88 46.6
ECA236G5065 Erigeron canadensis HOM05D018323 ORTHO05D010072 1.3e-06 57.4 84 50.0
HanXRQChr01g0017411 Helianthus annuus HOM05D008698 ORTHO05D010072 1.3e-06 57.4 91 61.5
Actinidia01252 Actinidia chinensis HOM05D016621 ORTHO05D010071 1.7e-06 57.0 91 51.6
HanXRQChr07g0198711 Helianthus annuus HOM05D013051 ORTHO05D010071 3.7e-06 55.8 194 53.6
CANSAT25G0609 Cannabis sativa HOM05D015382 ORTHO05D010072 8.3e-06 54.7 70 68.6
CAN.G992.22 Capsicum annuum HOM05D016597 ORTHO05D018539 8.3e-06 54.7 167 64.1


User provided reference genes

Program Settings