Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 2.7e-152 542.0 275 100.0
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 5.6e-97 358.2 220 80.5
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 2.8e-88 329.3 200 78.5
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 6.8e-87 324.7 193 78.8
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 1.5e-86 323.6 204 75.0
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 7.5e-86 321.2 208 73.6
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 7.5e-86 321.2 186 80.1
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 1.9e-84 316.6 215 72.6
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 1.2e-83 313.9 194 77.3
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 2.7e-83 312.8 196 73.0
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 1.3e-82 310.5 177 80.8
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 1.7e-82 310.1 190 76.3
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.7e-82 310.1 169 84.6
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 3.9e-82 308.9 220 70.9
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 6.6e-82 308.1 188 76.1
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 8.6e-82 307.8 205 72.7
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 8.6e-82 307.8 196 74.5
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 1.1e-81 307.4 186 78.0
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.9e-81 306.6 188 76.6
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 1.9e-81 306.6 196 75.0
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.5e-81 306.2 171 82.5
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.5e-81 306.2 196 74.0
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 3.3e-81 305.8 191 75.9
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 4.3e-81 305.4 200 74.0
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 9.5e-81 304.3 200 73.0
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 1.6e-80 303.5 220 68.6
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.1e-80 303.1 197 72.6
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 2.1e-80 303.1 187 77.0
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 2.8e-80 302.8 202 70.8
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 3.6e-80 302.4 196 74.0
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 6.2e-80 301.6 169 81.7
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 8.1e-80 301.2 196 72.4
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.1e-79 300.8 175 79.4
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 1.1e-79 300.8 225 66.2
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 1.4e-79 300.4 211 68.2
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 1.8e-79 300.1 176 78.4
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 4.0e-79 298.9 187 75.4
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 4.0e-79 298.9 281 56.6
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 2.0e-78 296.6 224 64.7
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 2.0e-78 296.6 177 77.4
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.6e-78 296.2 204 70.1
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 3.4e-78 295.8 165 82.4
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 5.8e-78 295.0 205 69.8
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 7.6e-78 294.7 209 68.9
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 1.3e-77 293.9 207 69.1
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 1.3e-77 293.9 167 79.0
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 1.7e-77 293.5 211 68.2
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.7e-77 293.5 209 67.5
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 2.9e-77 292.7 191 73.8
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 3.7e-77 292.4 167 81.4
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 4.9e-77 292.0 185 74.6
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 6.4e-77 291.6 206 69.9
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 8.4e-77 291.2 165 80.6
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 1.1e-76 290.8 206 69.9
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 1.1e-76 290.8 210 70.0
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 1.4e-76 290.4 211 68.7
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 2.4e-76 289.7 167 79.0
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 2.4e-76 289.7 194 72.7
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 3.2e-76 289.3 193 73.1
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 4.1e-76 288.9 161 83.9
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 7.1e-76 288.1 196 71.4
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 7.1e-76 288.1 167 77.8
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 1.2e-75 287.3 177 77.4
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 3.5e-75 285.8 158 83.5
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 4.6e-75 285.4 158 82.3
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 1.3e-74 283.9 168 78.6
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 2.3e-74 283.1 184 74.5
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 3.9e-74 282.3 183 72.7
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 5.1e-74 282.0 202 70.3
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 8.6e-74 281.2 172 76.7
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.5e-73 280.4 195 70.3
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 2.5e-73 279.6 186 72.6
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 5.6e-73 278.5 170 74.1
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 1.2e-72 277.3 169 74.6
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 1.2e-72 277.3 187 72.7
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 2.8e-72 276.2 165 75.2
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 8.1e-72 274.6 158 80.4
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 3.1e-71 272.7 223 61.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 3.1e-71 272.7 191 70.7
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 3.4e-70 269.2 159 78.6
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 4.4e-70 268.9 196 68.4
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 2.9e-69 266.2 223 62.8
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 2.9e-69 266.2 172 74.4
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 6.4e-69 265.0 168 75.6
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.5e-62 243.8 191 61.3
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 5.8e-62 241.9 181 65.2
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 4.9e-61 238.8 193 61.1
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 1.9e-60 236.9 191 56.5
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 9.3e-60 234.6 145 77.2
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 3.3e-57 226.1 177 58.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 1.2e-54 217.6 177 58.8
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 3.4e-54 216.1 150 68.0
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 5.8e-54 215.3 144 70.1
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 3.5e-51 206.1 131 74.8
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 6.0e-51 205.3 236 52.1
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.9e-49 200.3 121 76.9
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 9.6e-41 171.4 163 49.7
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 8.2e-40 168.3 180 47.2
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 5.9e-38 162.2 169 45.6
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 1.6e-32 144.1 104 62.5
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 1.8e-26 124.0 64 87.5
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.3e-21 107.8 166 39.2
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 1.7e-21 107.5 203 32.5
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 4.2e-20 102.8 64 71.9
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 5.7e-17 92.4 57 78.9
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 3.7e-16 89.7 221 27.6
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 6.5e-13 79.0 44 77.3
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 8.5e-13 78.6 187 32.1
Actinidia31734 Actinidia chinensis HOM05D006927 ORTHO05D056651 1.8e-10 70.9 76 51.3


User provided reference genes

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