Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 8.3e-154 547.0 270 100.0
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 7.8e-120 434.1 272 79.0
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 4.4e-115 418.3 272 77.6
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.3e-114 416.8 256 81.6
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.4e-113 412.5 252 81.7
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 2.3e-111 406.0 272 73.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 7.3e-110 401.0 272 76.5
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.0e-108 395.2 272 74.6
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 5.3e-108 394.8 273 71.1
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 3.8e-106 388.7 255 72.9
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 8.4e-106 387.5 272 71.3
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 3.2e-105 385.6 269 69.9
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 1.2e-104 383.6 272 71.0
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 2.1e-104 382.9 272 71.0
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.3e-103 380.2 273 70.3
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.8e-103 379.8 276 67.4
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.0e-103 379.0 272 69.1
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 6.7e-103 377.9 272 70.2
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 6.7e-103 377.9 272 69.9
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 6.7e-103 377.9 273 70.0
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 6.7e-103 377.9 273 70.3
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 6.7e-103 377.9 247 75.7
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 8.7e-103 377.5 272 69.5
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 8.7e-103 377.5 272 69.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.1e-102 377.1 274 69.0
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 2.5e-102 375.9 273 69.6
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 5.6e-102 374.8 286 66.1
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 7.4e-102 374.4 274 68.2
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.3e-101 373.6 271 69.0
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.6e-101 373.2 280 67.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 2.1e-101 372.9 269 68.0
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.7e-101 372.1 279 66.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.1e-100 370.5 272 67.3
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 2.4e-100 369.4 281 66.2
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.0e-100 368.6 279 66.3
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 9.0e-100 367.5 272 68.4
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.5e-99 366.7 279 66.3
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.5e-99 365.2 275 66.5
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 7.6e-99 364.4 269 66.5
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.3e-98 363.6 271 66.1
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 2.9e-98 362.5 273 65.9
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 4.9e-98 361.7 273 66.3
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.9e-97 359.8 255 69.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.9e-97 359.8 255 69.4
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 9.3e-97 357.5 269 67.3
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 9.3e-97 357.5 271 65.3
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 1.6e-96 356.7 276 67.0
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.7e-96 355.9 276 64.5
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 2.7e-96 355.9 269 65.4
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 3.5e-96 355.5 277 66.1
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 6.0e-96 354.8 275 66.2
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 7.9e-96 354.4 276 64.1
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 2.3e-95 352.8 289 61.9
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.3e-95 352.8 272 64.7
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 6.7e-95 351.3 272 64.0
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.7e-95 350.9 289 61.6
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.9e-94 349.7 276 63.0
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 5.7e-94 348.2 293 59.0
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 9.6e-94 347.4 276 62.3
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 9.6e-94 347.4 276 62.7
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.3e-93 347.1 274 62.8
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 1.3e-93 347.1 272 63.6
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 4.8e-93 345.1 252 66.7
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 6.2e-93 344.7 275 63.6
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 8.2e-93 344.4 272 62.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.4e-92 342.8 276 62.7
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 3.1e-92 342.4 272 65.1
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 5.3e-92 341.7 274 61.3
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 5.3e-92 341.7 274 61.3
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 5.3e-92 341.7 274 61.3
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 6.9e-92 341.3 276 62.3
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.6e-91 339.3 250 66.4
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.3e-90 337.0 274 61.3
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.9e-90 335.9 242 69.0
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 3.8e-90 335.5 280 59.6
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 5.0e-90 335.1 252 64.7
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 8.4e-90 334.3 257 65.0
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 1.4e-89 333.6 272 62.9
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.1e-89 331.3 270 63.0
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 9.3e-89 330.9 251 64.1
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.6e-88 330.1 272 61.0
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 6.1e-88 328.2 268 64.2
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.8e-87 326.6 269 60.6
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 3.9e-87 325.5 263 62.7
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 1.9e-86 323.2 266 62.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 3.3e-86 322.4 272 59.6
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 3.3e-86 322.4 269 61.0
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.7e-86 320.9 289 58.5
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.0e-84 314.3 252 62.3
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.5e-83 313.5 271 59.8
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 5.0e-82 308.5 271 59.4
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.1e-81 307.4 269 60.2
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 1.4e-81 307.0 191 76.4
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.8e-79 300.1 269 59.5
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 4.7e-72 275.4 189 70.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.0e-70 270.0 257 55.6
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.6e-70 269.6 265 55.5
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 2.2e-69 266.5 257 53.7
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 8.2e-69 264.6 212 63.2
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 2.6e-67 259.6 275 52.0
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 1.6e-64 250.4 240 56.2
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.6e-59 233.0 188 60.6
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 8.5e-58 228.0 280 47.9
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.7e-56 223.0 272 50.4
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.0e-47 194.5 165 58.2
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.2e-43 181.0 125 68.0
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.3e-42 177.6 282 37.6
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 3.5e-35 152.9 146 54.8
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 4.6e-27 125.9 217 35.5
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 4.4e-22 109.4 60 78.3
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.1e-20 104.8 257 33.9
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.9e-20 104.0 60 75.0
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.1e-17 94.7 57 66.7
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 4.3e-17 92.8 70 62.9
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 1.1e-15 88.2 118 39.0
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 2.3e-15 87.0 83 62.7


User provided reference genes

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