Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 4.6e-97 358.2 225 100.0
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 6.0e-65 251.5 202 76.7
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 6.0e-65 251.5 201 72.1
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 1.7e-64 250.0 202 77.2
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 5.1e-64 248.4 200 70.5
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 9.6e-63 244.2 201 81.1
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.1e-62 243.0 170 77.6
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 2.8e-62 242.7 163 81.0
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 8.1e-62 241.1 200 75.5
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.1e-61 240.7 200 74.0
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.1e-61 240.7 136 86.0
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 1.8e-61 240.0 221 72.9
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 3.1e-61 239.2 200 76.5
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 5.3e-61 238.4 201 71.1
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 5.3e-61 238.4 203 75.4
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 9.0e-61 237.7 204 77.5
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 9.0e-61 237.7 163 76.1
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.2e-60 237.3 169 79.9
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 1.2e-60 237.3 203 68.0
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 2.6e-60 236.1 134 85.8
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 3.4e-60 235.7 202 71.8
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 7.6e-60 234.6 135 84.4
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 9.9e-60 234.2 136 83.8
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 1.3e-59 233.8 146 78.1
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.3e-59 233.8 200 76.0
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 1.7e-59 233.4 199 73.9
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 1.7e-59 233.4 202 68.8
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 2.2e-59 233.0 134 85.8
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 2.2e-59 233.0 201 69.2
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 4.9e-59 231.9 200 64.5
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 8.4e-59 231.1 200 63.5
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.1e-58 230.7 133 82.7
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.4e-58 230.3 135 84.4
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 1.9e-58 229.9 201 63.7
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.9e-58 229.9 200 65.5
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 3.2e-58 229.2 125 87.2
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 3.2e-58 229.2 133 85.0
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 4.2e-58 228.8 134 81.3
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 4.2e-58 228.8 135 83.0
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 4.2e-58 228.8 134 82.8
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 5.4e-58 228.4 135 82.2
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 7.1e-58 228.0 134 82.8
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 9.3e-58 227.6 198 69.2
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.6e-57 226.9 200 62.0
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 2.1e-57 226.5 136 81.6
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 2.7e-57 226.1 135 79.3
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 3.5e-57 225.7 135 80.7
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 3.5e-57 225.7 202 63.4
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 3.5e-57 225.7 203 63.1
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 3.5e-57 225.7 155 78.7
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 4.6e-57 225.3 136 79.4
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 4.6e-57 225.3 136 79.4
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 6.0e-57 224.9 133 82.7
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 7.9e-57 224.6 135 80.7
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 1.0e-56 224.2 135 79.3
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.0e-56 224.2 131 84.7
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 1.0e-56 224.2 200 72.5
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.0e-56 224.2 136 82.4
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 1.0e-56 224.2 125 85.6
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.7e-56 223.4 126 83.3
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 3.0e-56 222.6 125 87.2
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.9e-56 222.2 198 76.3
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 6.6e-56 221.5 134 81.3
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 8.7e-56 221.1 138 76.8
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.3e-55 218.8 134 79.1
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 5.6e-55 218.4 133 79.7
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.6e-54 216.9 127 81.9
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 1.6e-54 216.9 136 76.5
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 1.6e-54 216.9 136 76.5
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.6e-54 216.9 136 76.5
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.6e-54 216.9 133 78.2
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 2.1e-54 216.5 136 75.7
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 3.6e-54 215.7 136 76.5
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 3.6e-54 215.7 136 76.5
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 3.1e-53 212.6 135 76.3
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 3.1e-53 212.6 136 79.4
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.0e-53 212.2 201 69.2
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.0e-53 212.2 201 69.2
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 9.0e-53 211.1 135 77.0
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 9.0e-53 211.1 154 72.7
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 2.6e-52 209.5 136 78.7
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 4.5e-52 208.8 163 73.0
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.6e-52 208.0 163 73.6
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 9.9e-52 207.6 199 63.3
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.1e-50 204.1 134 75.4
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.1e-50 204.1 134 75.4
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.1e-50 204.1 133 75.9
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 3.2e-50 202.6 134 76.9
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 3.5e-49 199.1 136 71.3
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 3.0e-48 196.1 132 68.9
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 3.9e-48 195.7 218 59.6
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.5e-47 193.7 120 79.2
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 4.3e-47 192.2 135 69.6
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 9.6e-47 191.0 135 72.6
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 8.1e-46 188.0 135 68.1
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.1e-45 187.6 210 58.1
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.8e-45 186.8 126 73.0
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.8e-45 186.8 126 73.0
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 4.0e-45 185.7 106 82.1
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 1.2e-44 184.1 128 68.8
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 4.9e-43 178.7 129 63.6
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 4.9e-43 178.7 129 63.6
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 7.1e-42 174.9 125 72.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 1.3e-40 170.6 127 63.0
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 8.7e-40 167.9 130 61.5
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.3e-38 164.1 124 66.1
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.1e-37 161.0 94 81.9
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.2e-35 153.3 108 75.0
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 8.4e-35 151.4 90 84.4
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.7e-30 136.0 86 80.2
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.4e-24 117.5 94 61.7
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.0e-23 113.6 59 89.8
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 5.7e-23 112.1 80 70.0
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 5.9e-20 102.1 136 41.2
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 3.7e-14 82.8 154 34.4
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 2.9e-11 73.2 153 37.9
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 1.4e-08 64.3 55 54.5


User provided reference genes

Program Settings