Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 8.6e-65 250.4 145 100.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 3.9e-41 171.8 133 71.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 5.6e-40 167.9 145 68.3
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.1e-38 163.7 144 70.8
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.7e-36 156.4 142 69.0
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.4e-36 154.1 142 68.3
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 8.4e-36 154.1 139 71.2
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.3e-33 146.7 153 64.1
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 6.7e-33 144.4 142 62.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 6.7e-33 144.4 137 62.0
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 8.7e-33 144.1 148 60.1
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 1.5e-32 143.3 110 75.5
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.5e-32 143.3 145 64.1
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.3e-32 141.7 161 57.8
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 4.3e-32 141.7 133 66.2
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 4.3e-32 141.7 137 62.0
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 5.6e-32 141.4 130 72.3
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 9.6e-32 140.6 133 62.4
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.3e-31 140.2 147 59.2
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.6e-31 139.8 131 58.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 3.7e-31 138.7 137 63.5
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 3.7e-31 138.7 134 63.4
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 3.7e-31 138.7 156 57.7
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 6.2e-31 137.9 97 75.3
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 6.2e-31 137.9 131 60.3
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 6.2e-31 137.9 104 76.0
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 8.1e-31 137.5 112 73.2
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 8.1e-31 137.5 140 59.3
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 8.1e-31 137.5 139 61.9
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 8.1e-31 137.5 139 61.9
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.4e-30 136.7 137 56.2
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.4e-30 136.7 156 57.1
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.8e-30 136.3 139 61.9
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.4e-30 136.0 157 57.3
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 4.0e-30 135.2 145 60.0
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 4.0e-30 135.2 138 59.4
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 4.0e-30 135.2 137 55.5
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 5.3e-30 134.8 163 56.4
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 3.4e-29 132.1 146 59.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 4.5e-29 131.7 101 69.3
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 5.8e-29 131.3 141 68.1
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 5.8e-29 131.3 123 61.0
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.3e-28 130.2 145 57.2
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 2.9e-28 129.0 95 73.7
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 4.9e-28 128.3 133 57.9
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 8.4e-28 127.5 137 65.0
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.9e-27 126.3 136 58.8
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.4e-27 125.9 90 75.6
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 3.2e-27 125.6 104 69.2
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 3.2e-27 125.6 134 62.7
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 4.2e-27 125.2 161 50.9
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 4.2e-27 125.2 129 56.6
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 9.3e-27 124.0 135 54.1
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.2e-26 123.6 139 54.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 4.6e-26 121.7 122 63.1
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.8e-25 119.8 142 53.5
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 6.7e-25 117.9 115 59.1
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 9.6e-24 114.0 124 58.9
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 9.6e-24 114.0 110 64.5
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 9.6e-24 114.0 109 65.1
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 9.6e-24 114.0 109 65.1
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.8e-23 112.5 128 55.5
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 3.7e-23 112.1 190 44.7
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 8.2e-23 110.9 90 67.8
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.8e-22 109.8 139 55.4
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 2.6e-21 105.9 95 65.3
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 5.8e-21 104.8 102 58.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.0e-20 104.0 99 61.6
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 1.3e-20 103.6 156 47.4
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 2.9e-20 102.4 121 54.5
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 3.8e-20 102.1 140 48.6
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 6.5e-20 101.3 189 47.6
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 6.5e-20 101.3 189 47.6
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 8.4e-20 100.9 122 55.7
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.5e-16 90.1 130 56.9
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.5e-16 90.1 100 59.0
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.9e-16 89.7 100 59.0
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.5e-16 89.4 132 50.0
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 3.3e-16 89.0 130 56.2
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 9.7e-16 87.4 129 41.9
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.3e-15 87.0 100 58.0
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 2.2e-15 86.3 100 57.0
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 2.2e-15 86.3 134 50.7
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.8e-15 85.9 88 60.2
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 1.1e-14 84.0 102 55.9
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.8e-14 83.2 101 55.4
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 4.1e-14 82.0 129 54.3
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 6.9e-14 81.3 132 51.5
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.5e-13 80.1 119 51.3
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 2.0e-13 79.7 100 56.0
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.6e-13 79.3 104 48.1
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 3.4e-13 79.0 100 54.0
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 1.7e-12 76.6 106 50.9
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 8.5e-12 74.3 128 43.0
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.5e-11 72.8 100 49.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 4.2e-11 72.0 108 48.1
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 5.5e-11 71.6 107 48.6
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.2e-11 71.2 104 43.3
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 2.1e-10 69.7 111 55.0
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 7.9e-10 67.8 135 39.3
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 5.1e-09 65.1 103 44.7
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 4.3e-08 62.0 91 46.2
HPP92_009584 Vanilla planifolia HOM05D007629 ORTHO05D009511 4.8e-07 58.5 133 35.3
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 1.4e-06 57.0 103 38.8


User provided reference genes

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