Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42750 Davidia involucrata HOM05D008750 ORTHO05D010839 7.3e-107 390.6 199 100.0
Dinv43352 Davidia involucrata HOM05D008750 ORTHO05D010839 7.3e-107 390.6 199 100.0
CSS0033938 Camellia sinensis var. sinensis HOM05D008750 ORTHO05D010839 2.4e-25 119.8 97 61.9
Lj7C470T7 Lonicera japonica HOM05D008750 ORTHO05D010839 1.2e-24 117.5 174 42.5
Rhsim03G0263300 Rhododendron simsii HOM05D008750 ORTHO05D010839 3.3e-22 109.4 102 54.9
Rhsim01G0007300 Rhododendron simsii HOM05D008750 ORTHO05D010839 4.3e-22 109.0 109 51.4
Rhsim03G0263400 Rhododendron simsii HOM05D008750 ORTHO05D010839 1.2e-21 107.5 86 62.8
Lj7C470T6 Lonicera japonica HOM05D008750 ORTHO05D010839 1.3e-18 97.4 83 59.0
Lj2C67T7 Lonicera japonica HOM05D008750 ORTHO05D010839 1.4e-17 94.0 82 56.1
Lj1C678T11 Lonicera japonica HOM05D000487 ORTHO05D000405 1.3e-15 87.4 110 45.5
DCAR_017964 Daucus carota HOM05D008750 ORTHO05D010839 1.7e-15 87.0 106 47.2
Thecc.09G167900 Theobroma cacao HOM05D008750 ORTHO05D010839 1.7e-15 87.0 95 49.5
Lsat_1_v5_gn_8_66061 Lactuca sativa HOM05D008750 ORTHO05D010839 9.5e-14 81.3 95 49.5
COL.COLO4_38410 Corchorus olitorius HOM05D008750 ORTHO05D010839 1.6e-13 80.5 115 43.5
DCAR_017963 Daucus carota HOM05D008750 ORTHO05D010839 3.6e-13 79.3 87 48.3
Duzib168G0353 Durio zibethinus HOM05D008750 ORTHO05D010839 4.7e-13 79.0 106 45.3
DCAR_017962 Daucus carota HOM05D008750 ORTHO05D010839 3.1e-12 76.3 105 41.0
Lsat_1_v5_gn_8_65921 Lactuca sativa HOM05D008750 ORTHO05D010839 4.0e-12 75.9 80 51.2
MELO3C004079.2 Cucumis melo HOM05D008750 ORTHO05D010839 5.2e-12 75.5 91 42.9
Manes.06G024500 Manihot esculenta HOM05D008750 ORTHO05D010839 5.2e-12 75.5 128 37.5
Lsat_1_v5_gn_8_66041 Lactuca sativa HOM05D008750 ORTHO05D010839 2.0e-11 73.6 95 44.2
Manes.06G024650 Manihot esculenta HOM05D008750 ORTHO05D010839 3.4e-11 72.8 85 42.4
DCAR_017961 Daucus carota HOM05D008750 ORTHO05D010839 1.3e-10 70.9 103 38.8
ECA236G4119 Erigeron canadensis HOM05D008750 ORTHO05D010839 1.7e-10 70.5 81 46.9
COL.COLO4_38413 Corchorus olitorius HOM05D008750 ORTHO05D010839 2.2e-10 70.1 99 41.4
AUR62041658 Chenopodium quinoa HOM05D008750 ORTHO05D010839 8.3e-10 68.2 105 40.0
ECA236G4277 Erigeron canadensis HOM05D008750 ORTHO05D010839 8.3e-10 68.2 100 39.0
Eucgr.C02392 Eucalyptus grandis HOM05D008750 ORTHO05D010839 1.4e-09 67.4 112 37.5
HanXRQChr05g0137541 Helianthus annuus HOM05D008750 ORTHO05D010839 1.9e-09 67.0 97 41.2
AUR62016235 Chenopodium quinoa HOM05D008750 ORTHO05D010839 5.4e-09 65.5 88 40.9
EL10Ac3g05536 Beta vulgaris HOM05D008750 ORTHO05D010839 1.2e-08 64.3 105 37.1
ECA236G3374 Erigeron canadensis HOM05D008750 ORTHO05D010839 1.2e-08 64.3 92 40.2
Sed0019741 Sechium edule HOM05D008750 ORTHO05D010839 1.6e-08 63.9 95 40.0
CsaV3_2G008040 Cucumis sativus L. HOM05D008750 ORTHO05D010839 3.5e-08 62.8 79 39.2
DCAR_017960 Daucus carota HOM05D008750 ORTHO05D010839 4.6e-08 62.4 83 42.2
Nn4g24057 Nelumbo nucifera HOM05D041019 ORTHO05D010839 7.8e-08 61.6 70 52.9
TAR622G0042 Trochodendron aralioides HOM05D041019 ORTHO05D010839 1.7e-07 60.5 85 44.7
Lj7C470T5 Lonicera japonica HOM05D008750 ORTHO05D010839 3.3e-06 56.2 72 51.4
Hma1.2p1_2725F.1_g327590 Hydrangea macrophylla HOM05D009859 ORTHO05D011989 7.3e-06 55.1 100 36.0
Sed0004116 Sechium edule HOM05D008750 ORTHO05D010839 7.3e-06 55.1 95 35.8


User provided reference genes

Program Settings